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KJC3_003869-T1, KJC3_003869-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003869-T1
Unique NameKJC3_003869-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3269748..3270587-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003869-T1 ID=KJC3_003869-T1|Name=KJC3_003869-T1|organism=Aspergillus niger KJC3|type=mRNA|length=840bp|location=Sequence derived from alignment at ch3:3269748..3270587- (Aspergillus niger KJC3)
CCTCGTTCTCGTTGTCATTCTTGTTGACTTGTGTGTTTTCGTGTGCGTTT
GCATCTATTAGAAATTGTTGAAAATGAAGGCTTACTGGTACGATAACAAG
CCGGTGAGTCTATACAATCTATCCCGCTTAGCCTTTGCCCCCCCGCCTGC
ATGGCTTCATTACCCCTCAATTGGTTACCATAATGGCATACTAACATCTC
ATCACTATCAGGGCGACCAGCGCGAACCCCACGACGACGGTCGTCCCGTC
GACGAAGCCTACCTCGCCTCCCTGGGTGTCTTCTACAAGTACTGCCCGAG
CATCGAGGACGTTGACGCCCTGGCAGCCGAGCGCGGATACAAGAACCGCG
ATGAGGTCACCGTGTCCCCCAAGACCATGGGTGATGTGTACGAGGAGAAG
GTGAAGATGTTCTTCCACGAACATCTCCACGAGGACGAGGAAATCCGCTA
CATCCGGGATGGTGAGGGATACTTTGATGTCCGTGGCAAGGAGGACGAGT
GGGTCCGCATTAAGTTGGTGAAGGATGATCTGATTATTCTCCCCGCGGGT
ATCTACCATCGCTTTACGACGGATGAAAAGAACGTAAGTACATGTGAACT
GGGGATGTGGTGTTTTGATGGGTGCTAACGGGTCTGGATTTAGTATGTCA
AGGCTATGCGTCTCTTCCAGGAGGAACCCAAGTGGACTCCCTTGAACCGT
AGCAACGAACTGGATGAGAACCCGCACCGCGTGTCTTACCTCGGTAGTCT
GGGTAAGGCTGCTGTTGCTGCTGTTTAAATAATCCTGGGGGTGGCAATGT
AAAGCTTGATGTGATGACTATGTTATATACCATGGCAATG
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Coding sequence (CDS) from alignment at ch3:3269748..3270587-

>KJC3_003869-T1 ID=KJC3_003869-T1|Name=KJC3_003869-T1|organism=Aspergillus niger KJC3|type=CDS|length=1611bp|location=Sequence derived from alignment at ch3:3269748..3270587- (Aspergillus niger KJC3)
TATGTCAAGGCTATGCGTCTCTTCCAGGAGGAACCCAAGTGGACTCCCTT
GAACCGTAGCAACGAACTGGATGAGAACCCGCACCGCGTGTCTTACCTCG
GTAGTCTGGGTAAGGCTGCTGTTGCTGCTGTTTAAGGCGACCAGCGCGAA
CCCCACGACGACGGTCGTCCCGTCGACGAAGCCTACCTCGCCTCCCTGGG
TGTCTTCTACAAGTACTGCCCGAGCATCGAGGACGTTGACGCCCTGGCAG
CCGAGCGCGGATACAAGAACCGCGATGAGGTCACCGTGTCCCCCAAGACC
ATGGGTGATGTGTACGAGGAGAAGGTGAAGATGTTCTTCCACGAACATCT
CCACGAGGACGAGGAAATCCGCTACATCCGGGATGGTGAGGGATACTTTG
ATGTCCGTGGCAAGGAGGACGAGTGGGTCCGCATTAAGTTGGTGAAGGAT
GATCTGATTATTCTCCCCGCGGGTATCTACCATCGCTTTACGACGGATGA
AAAGAACATGAAGGCTTACTGGTACGATAACAAGCCGTATGTCAAGGCTA
TGCGTCTCTTCCAGGAGGAACCCAAGTGGACTCCCTTGAACCGTAGCAAC
GAACTGGATGAGAACCCGCACCGCGTGTCTTACCTCGGTAGTCTGGGTAA
GGCTGCTGTTGCTGCTGTTTAAGGCGACCAGCGCGAACCCCACGACGACG
GTCGTCCCGTCGACGAAGCCTACCTCGCCTCCCTGGGTGTCTTCTACAAG
TACTGCCCGAGCATCGAGGACGTTGACGCCCTGGCAGCCGAGCGCGGATA
CAAGAACCGCGATGAGGTCACCGTGTCCCCCAAGACCATGGGTGATGTGT
ACGAGGAGAAGGTGAAGATGTTCTTCCACGAACATCTCCACGAGGACGAG
GAAATCCGCTACATCCGGGATGGTGAGGGATACTTTGATGTCCGTGGCAA
GGAGGACGAGTGGGTCCGCATTAAGTTGGTGAAGGATGATCTGATTATTC
TCCCCGCGGGTATCTACCATCGCTTTACGACGGATGAAAAGAACATGAAG
GCTTACTGGTACGATAACAAGCCGTATGTCAAGGCTATGCGTCTCTTCCA
GGAGGAACCCAAGTGGACTCCCTTGAACCGTAGCAACGAACTGGATGAGA
ACCCGCACCGCGTGTCTTACCTCGGTAGTCTGGGTAAGGCTGCTGTTGCT
GCTGTTTAAGGCGACCAGCGCGAACCCCACGACGACGGTCGTCCCGTCGA
CGAAGCCTACCTCGCCTCCCTGGGTGTCTTCTACAAGTACTGCCCGAGCA
TCGAGGACGTTGACGCCCTGGCAGCCGAGCGCGGATACAAGAACCGCGAT
GAGGTCACCGTGTCCCCCAAGACCATGGGTGATGTGTACGAGGAGAAGGT
GAAGATGTTCTTCCACGAACATCTCCACGAGGACGAGGAAATCCGCTACA
TCCGGGATGGTGAGGGATACTTTGATGTCCGTGGCAAGGAGGACGAGTGG
GTCCGCATTAAGTTGGTGAAGGATGATCTGATTATTCTCCCCGCGGGTAT
CTACCATCGCTTTACGACGGATGAAAAGAACATGAAGGCTTACTGGTACG
ATAACAAGCCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019509L-methionine salvage from methylthioadenosine
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0010309acireductone dioxygenase [iron(II)-requiring] activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ADI1KJC3_003869Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003869-T1KJC3_003869-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003869-T1.cdsKJC3_003869-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003869-T1.utr3p1KJC3_003869-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003869-T1.exon3KJC3_003869-T1.exon3Aspergillus niger KJC3exon
KJC3_003869-T1.exon2KJC3_003869-T1.exon2Aspergillus niger KJC3exon
KJC3_003869-T1.exon1KJC3_003869-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003869-T1.utr5p1KJC3_003869-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011051
DBxrefInterPro:IPR027496
DBxrefInterPro:IPR004313
DBxrefInterPro:IPR014710
DBxrefPFAM:PF07883
DBxrefPFAM:PF03079
Product2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
Product1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3269748..3270587 -
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