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KJC3_003872-T1, KJC3_003872-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003872-T1
Unique NameKJC3_003872-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3276403..3278142-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003872-T1 ID=KJC3_003872-T1|Name=KJC3_003872-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1740bp|location=Sequence derived from alignment at ch3:3276403..3278142- (Aspergillus niger KJC3)
CGACCATGATCCAAGCAGCTCTGAGAATAGCAAAGCTTAAACCTGACTAT
CGGATCAATGTCTCTGAATAACATGACTGCTATGGCTTGGTCCACCAGAT
ATGGTTTATATGTGCTCGACTCCCACAACAGGGGCCATCTATAGTCCACT
CAAGTCCTGCTGGCTGAGTGGATCAGCAACAACGCTCGGTGTGCTTGGTC
TACAAAAACCTACAGAGGATGCTAATTCTAGGATTACCGGTAGGTATTTT
GAGCTCTTGCCAGGTAGTCGAGTTGATAAACTTGACTATCAAGTGGGGTA
TCCAGCTGTACAAGCACCATCAGGGGCAGTTCGTGACACCTTACCCATCA
GCCACCGTCGCCTCCTCACGGTTTGTTCCTCCTCACTCTTTTCCTTGACT
CACTCCATTCATTTCTAAAGCAGGATATAAAGCACATCTTTGACTGTCAA
TTATACAACAGGCCCCACGTTCTTGCTTGAGGAGGATCCCATATGGGCAC
AAAGCTTGTGCGATCTATGAACATCTGTCGTCCACCAGTCGCACGTTCCG
ACTCGTTTTTAGTACCCTTTTATATTAAAATTACTTTTTGAGTATGAAGT
GTACTATGTCTTCAGTATACGCTGCTCTCATGGTCGCTTTTCCTATACTG
GCAATGTCAGCCACCAGGCTGACGACGACAACAGTTGTCACAACAGCACC
TCCAACAGCATATGTTCAAGTTTTCGAGGCAAACGCCGTGCTTTACAGCA
GTATCTTTAGTTTTCTGGCTGGAAGCATTGTGGATGTGGATACTGTGGAG
GACCGGACTACTATCGGGACCAACTGTATCCATAGCCTAATCGCTAACTG
CTCGTTGGAGACTGTCAGTTTCCCCCCTACGTTTACCATGGGACCTTCAA
CGTACATACACAGCTCAAGCGGCTCCGAACGAAATTCCCAGCAGTACACT
ATCGATATCGATTCAAGGGCCTGCAGAATCGTTTCTTCAACCCAAAGCGC
ATCCTGCGAGTTTTATGCAAGCTACTGGTATTCTGACCCCAAAACGAGCA
CGTCCAAACATATAACGCGCCATACGACGTTGAAGTCTTCAGAAATCAAT
TACCACAACCTATTAATTACGGCCGGTGTGGAGAAGCTCCCAACTCCAGT
GACGACGTCGCAGACCCAAAAAAGGACCGTCCCCACGGCTACTGCTTTGC
CTTCTACTACGGCCGCTGCCTCTTCGCCTAGCTCATCTTCAGAATCACGT
CCTTCAAAAGAGTGGATCGCCGGGCCGGTTGTGGGAGCCGTGGCTGGGTG
CGGCCTGGTCGCAGCTGCGTTATACCGGTGTCTCAGGCGGAAAGGACAAG
AAGAGCCATCGGCTGATTCTGGACCGATAATCCAGGATCCTTCAGAGGAA
ATTAGGGGACTCAGCAGCCCTGCTAAGTCTGTATGCGAAGCGGCTATGCC
AGCGGAAACTCAGGGCACCCCTGTATCCGAACTTCCAGCAGATGAGCCCT
CATGCATCCAACATACTACCTAGCTTTACTCTGGGTCCTTGGTAAGAGCA
ATGAACAGAGCCGTGAATAGTGCAATGGGACGGGATTCGCGCGCAAGCAG
TTCTATTAAATCTAAAGACATGTCAAGCCTGTTGGTGTGGTCCCGGTCTT
AGTAGGAACTGTGGAGGATATACTTTACCACTGACGATGGTGTGGGTCTT
TTCCTATGTCTAATAATCTCAAATTGATACAATATAGGCG
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Coding sequence (CDS) from alignment at ch3:3276403..3278142-

>KJC3_003872-T1 ID=KJC3_003872-T1|Name=KJC3_003872-T1|organism=Aspergillus niger KJC3|type=CDS|length=930bp|location=Sequence derived from alignment at ch3:3276403..3278142- (Aspergillus niger KJC3)
ATGAAGTGTACTATGTCTTCAGTATACGCTGCTCTCATGGTCGCTTTTCC
TATACTGGCAATGTCAGCCACCAGGCTGACGACGACAACAGTTGTCACAA
CAGCACCTCCAACAGCATATGTTCAAGTTTTCGAGGCAAACGCCGTGCTT
TACAGCAGTATCTTTAGTTTTCTGGCTGGAAGCATTGTGGATGTGGATAC
TGTGGAGGACCGGACTACTATCGGGACCAACTGTATCCATAGCCTAATCG
CTAACTGCTCGTTGGAGACTGTCAGTTTCCCCCCTACGTTTACCATGGGA
CCTTCAACGTACATACACAGCTCAAGCGGCTCCGAACGAAATTCCCAGCA
GTACACTATCGATATCGATTCAAGGGCCTGCAGAATCGTTTCTTCAACCC
AAAGCGCATCCTGCGAGTTTTATGCAAGCTACTGGTATTCTGACCCCAAA
ACGAGCACGTCCAAACATATAACGCGCCATACGACGTTGAAGTCTTCAGA
AATCAATTACCACAACCTATTAATTACGGCCGGTGTGGAGAAGCTCCCAA
CTCCAGTGACGACGTCGCAGACCCAAAAAAGGACCGTCCCCACGGCTACT
GCTTTGCCTTCTACTACGGCCGCTGCCTCTTCGCCTAGCTCATCTTCAGA
ATCACGTCCTTCAAAAGAGTGGATCGCCGGGCCGGTTGTGGGAGCCGTGG
CTGGGTGCGGCCTGGTCGCAGCTGCGTTATACCGGTGTCTCAGGCGGAAA
GGACAAGAAGAGCCATCGGCTGATTCTGGACCGATAATCCAGGATCCTTC
AGAGGAAATTAGGGGACTCAGCAGCCCTGCTAAGTCTGTATGCGAAGCGG
CTATGCCAGCGGAAACTCAGGGCACCCCTGTATCCGAACTTCCAGCAGAT
GAGCCCTCATGCATCCAACATACTACCTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003872KJC3_003872Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003872-T1KJC3_003872-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003872-T1.cdsKJC3_003872-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003872-T1.utr3p1KJC3_003872-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003872-T1.exon3KJC3_003872-T1.exon3Aspergillus niger KJC3exon
KJC3_003872-T1.exon2KJC3_003872-T1.exon2Aspergillus niger KJC3exon
KJC3_003872-T1.exon1KJC3_003872-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003872-T1.utr5p3KJC3_003872-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_003872-T1.utr5p2KJC3_003872-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_003872-T1.utr5p1KJC3_003872-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3276403..3278142 -
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