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KJC3_003880-T1, KJC3_003880-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003880-T1
Unique NameKJC3_003880-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3320513..3324115+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003880-T1 ID=KJC3_003880-T1|Name=KJC3_003880-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3603bp|location=Sequence derived from alignment at ch3:3320513..3324115+ (Aspergillus niger KJC3)
CTTGGACAAGTATATTGTGCGTGCGACTCTACATTAACTATCCTCCAATG
TTGTATCTAACGCTCTGTGCAGGAAAACAAGCTAAAGAAAGAAGAGAATC
TTGAGCTGCTAAAAAAGCTCGCGGAATCCAAGGTTGATACCTCGTCTCTC
CAGAGCTCTAGGGAATTAGGAAAGCGCAAGCGGCAAGATGAAGTACCAGC
CGTATCTAGAACCGCGGAACCCGACTCCCGCCTTGATCAGGACCTTGACC
TCTCGGACGATGATTCGGACGATTCGTTGCCCCAATTGAAGACCACTGTT
AGCGCATCTAAATCTGAAGCCCCCGCGCAAAAACCCGCAGAGAATCCAGC
GATCGGTATCGGGTTAAAGCGCCCTCTGGAACTCGGTCCAGATGGATTCC
CGGTTCTCAAGAAGCGAAAGCAGGTTTCGAAGAAACCCGAGATAACGATC
ACGATGCCAGAAGTACCGTGGGAAGGCTTTGGCTCGGATGAGGATCAAGA
TGAAGACGAGAAGTCTGAGGAGGGCGAAGATGAAGATTCGGAGGGAACAT
CCTCCGATGGCTCAAGCGATGAGGGAAGCGAGAGTGATGGCGAGGAAGAA
GAGGACGATGAAGACGATGATGAAGAGAGCGAAGAAGACGAAGACGAGGA
AGACAAAGAGGAAGAGAAGCATAAAGTGGGCCAACCTCGACAATCTGCCT
TCAAATCTTGGGCCAGGCAACAGATCAATGATGCCATCGGTTTCAAGCCT
ACCACTGTTCCAGTCGTCGAGGAGCAGCCCTTCATCCCGGAACGCAAGAA
GCCAGTCAGGAATACCGTTGCCGAGGAAGAACCCTTACCCTTGGAACTTC
AGGTCACCACAGGTGATCCTAACCGGAAAGCCTTTAGTGTTCAGGTTAAC
CGGTCAGAGGAAATACAAAATGCACGCTTGGGTCTGCCGGTTGTTGGCGA
GGAACAGAAGATCATGGAAGCAATCTACAATAATTCCTCGATCGTTATAT
GGGGAGCTACCGGTTCCGGAAAGACAACCCAGCTTCCCCAGTTCCTCTTC
GAAGCGGGCTATGGTAACCCGGACAGCCCCAATCCAGGCATGATCGGAGT
GACTCAACCGCGCCGAGTCGCAGCAGTCAGTATGGCGAAGCGTGTAGGCG
AAGAACTGGGCGAATTCTCCGACCAAGTCTCCTATCAAATTCGATTTGAG
AGCACAGCATCTAGCAAAACCGCGATCAAGTTCATGACTGATGGTATTCT
CATTCGCGAGATTGCCGAAGACTTCTCCCTCAGCAAGTATTCAGTCATCG
TGATTGATGAAGCCCACGAACGGAGCGTCAACACCGATATTCTCATTGGA
ATGGTCAGCCGCATTGTCGACTTGCGCAAGGCTATGCAGGAGGAAGACCC
GTCTGTCAAGCCTCTGAAGCTCGTGGTCATGTCTGCCACTCTGCGCATCT
CCGATTTCACGCAAAACCCGAACCTTTTCCGCCAAGGACCGCCACCCTTG
GTTCAGGCGCAAGGTCGCCAGTACCCTGTCACCATACACTTCTCCCGACG
TACCCATCGCGATTATGTCGAAGAGGCATTCCGCAAGGTGTCGAGGGGTC
ACCGCAAGCTACCTCCGGGTGGAATGCTTGTGTTCATGACCGGACAGAAT
GAGATCCGTCAGCTGTCCAAGCGTTTGAAGCAGGCCTTCAAACCCACCCA
GCGTGGCGAAGCTACTCAAGCCAAGGTCCAAATCTCTGCCAACGATGCAC
CCCTTGAGGCAGAGGATCTCGAGATCGGCGGTGCCGACCTGTCACTTGCT
GGCAACCAGGAAGATGACGAGAGCGATTTCGAAATCACTGGGTTGGATGA
ACCCGAGGAAGACGAAGACGAGTTTGATCTGGGTGAAGAGGCCATGAGCT
CGACGACTCGGGTCCACGTGCTCCCATTGTACTCCCAGCTTCCTACCAAG
GAGCAACTTAGGGTTTTCGAACCCCCGCCGGAAGGCTCCCGCCTTATTGT
CTTAGCCACCAACGTGGCTGAGACAAGTCTTACAATCCCGGGCATAAAGT
ACGTGTTTGACTGTGGCAGAGCAAAGGAGAAGCAGTACGATCTTGCAACA
GGCGTCCAGAAATTCCAGATTGAATGGATCAGCAAGGCCAGTGCCAATCA
GCGAGCTGGACGTGCTGGTAGAACTGGACCCGGTCATTGCTACCGTCTAT
ACTCTTCGGCAATCTACGAGAATGAATTCGCCGAATACACCGACCCAGAG
ATTCTGCGGACGCCGATCGAGGGTGTCGTACTTCAGATGAAGAGCATGGG
ACTTCACAATGTTATCAACTTCCCATTCCCGACACCACCCAGCCGTCAGG
GTCTTGCCAAGGCTGAGAAACTTCTCAAGAACCTGGGCGCACTCACCTCC
GAAGGCCAGATCACCCCAATAGGTAACCGCCTATCTACGTATCCTCTGTC
TCCCAGATTTGGCAAGATGCTGTACGTTGGCCACCAGCACGGCTGTATGC
CGTACGTCATCGCACTTGTTTCCGCCCTCGCAGTAGGCGATCTGTTTGTT
CCCGAGAACCAGATCGATCCTGTACCAGCCAACAAGGACGACAACGAGGG
CAAGGGTGTATACACGAACTCGGACCGTCTCGAAGACACCGCCCGGGAGC
AGCGCCACAAGGACTACGCCCGGGTGCACCGTCTCTTCAGCAAGCACGAT
GATACTTCCGACGCGCTGAAGTACCTGTCGGCGATTTGCGCCTACGGATA
CGCCTCCGACGGAGATTCGTTCTGTGAAAAGATGTTCCTGCGCGCAAAGG
CCTTCAAGGAAGCCACGCAGCTCCGTCGCCAGCTGACAGACATCGTGCGC
AGCAACAACCCGGGCCTGGTTCAGGCCTATCAGGCACGCTTGCCCGAACC
GACCGAAAAGCAGGTCAAGGCCATCAAACAGATCATCACGGCTGGGTTCA
TCGACAATGTTGCTCTCCGCGCGGACCTTGCGCCCGTCCCGCCTGAGATG
CACCGTACCCCCAAGCGAGCTATCGATGTCCCCTACTTCACGCTGATGCG
GTCTCGTGACGGCCCCGGCTTGGAGCTTGACGATAAGGCTGTCTATGTGC
ACCCGTCGTCTGTCATTGCGCAGCTCTCGGCTAAGGAAATGCCCCAGTAT
ATTGTGTACTCGCATCTCCAGCAATCGTCGCCCTCCATTGTGTCTGCAGA
CCAGACCCCTAAGATCCGGATGTATCCCCTCGCCACACCTAGCGGACTAC
AGCTCTCTGCGCTGGCACACGGCACACCGCTGATCGAGTACGGCAAGCCC
ATCGGCAAGACGGAGTTGATCGAGGGTATCCCTCAGCGGCGATCATGCTG
GGTGATCCCGTCTCTGGTGGGTGAGGCCGGCGGATCACGGTGGCCGTTAC
CAGCCAAGAAGGTCATCCAAAGGAAGGATGCGAAGGAGGGATGGGTGATT
GAAAAATTTGTCGCATAATGTATATACCAGACGCTTACAATTACAAAAGT
GGTGATGATGATTATGATGCAATAATCAGCTGCTATCCCAGTACTGTAGT
CATGATAATGATAAAATAGAACCAGCACCCATGCCAACCACTAACACCTT
TAG
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Coding sequence (CDS) from alignment at ch3:3320513..3324115+

>KJC3_003880-T1 ID=KJC3_003880-T1|Name=KJC3_003880-T1|organism=Aspergillus niger KJC3|type=CDS|length=3015bp|location=Sequence derived from alignment at ch3:3320513..3324115+ (Aspergillus niger KJC3)
ATGCCAGAAGTACCGTGGGAAGGCTTTGGCTCGGATGAGGATCAAGATGA
AGACGAGAAGTCTGAGGAGGGCGAAGATGAAGATTCGGAGGGAACATCCT
CCGATGGCTCAAGCGATGAGGGAAGCGAGAGTGATGGCGAGGAAGAAGAG
GACGATGAAGACGATGATGAAGAGAGCGAAGAAGACGAAGACGAGGAAGA
CAAAGAGGAAGAGAAGCATAAAGTGGGCCAACCTCGACAATCTGCCTTCA
AATCTTGGGCCAGGCAACAGATCAATGATGCCATCGGTTTCAAGCCTACC
ACTGTTCCAGTCGTCGAGGAGCAGCCCTTCATCCCGGAACGCAAGAAGCC
AGTCAGGAATACCGTTGCCGAGGAAGAACCCTTACCCTTGGAACTTCAGG
TCACCACAGGTGATCCTAACCGGAAAGCCTTTAGTGTTCAGGTTAACCGG
TCAGAGGAAATACAAAATGCACGCTTGGGTCTGCCGGTTGTTGGCGAGGA
ACAGAAGATCATGGAAGCAATCTACAATAATTCCTCGATCGTTATATGGG
GAGCTACCGGTTCCGGAAAGACAACCCAGCTTCCCCAGTTCCTCTTCGAA
GCGGGCTATGGTAACCCGGACAGCCCCAATCCAGGCATGATCGGAGTGAC
TCAACCGCGCCGAGTCGCAGCAGTCAGTATGGCGAAGCGTGTAGGCGAAG
AACTGGGCGAATTCTCCGACCAAGTCTCCTATCAAATTCGATTTGAGAGC
ACAGCATCTAGCAAAACCGCGATCAAGTTCATGACTGATGGTATTCTCAT
TCGCGAGATTGCCGAAGACTTCTCCCTCAGCAAGTATTCAGTCATCGTGA
TTGATGAAGCCCACGAACGGAGCGTCAACACCGATATTCTCATTGGAATG
GTCAGCCGCATTGTCGACTTGCGCAAGGCTATGCAGGAGGAAGACCCGTC
TGTCAAGCCTCTGAAGCTCGTGGTCATGTCTGCCACTCTGCGCATCTCCG
ATTTCACGCAAAACCCGAACCTTTTCCGCCAAGGACCGCCACCCTTGGTT
CAGGCGCAAGGTCGCCAGTACCCTGTCACCATACACTTCTCCCGACGTAC
CCATCGCGATTATGTCGAAGAGGCATTCCGCAAGGTGTCGAGGGGTCACC
GCAAGCTACCTCCGGGTGGAATGCTTGTGTTCATGACCGGACAGAATGAG
ATCCGTCAGCTGTCCAAGCGTTTGAAGCAGGCCTTCAAACCCACCCAGCG
TGGCGAAGCTACTCAAGCCAAGGTCCAAATCTCTGCCAACGATGCACCCC
TTGAGGCAGAGGATCTCGAGATCGGCGGTGCCGACCTGTCACTTGCTGGC
AACCAGGAAGATGACGAGAGCGATTTCGAAATCACTGGGTTGGATGAACC
CGAGGAAGACGAAGACGAGTTTGATCTGGGTGAAGAGGCCATGAGCTCGA
CGACTCGGGTCCACGTGCTCCCATTGTACTCCCAGCTTCCTACCAAGGAG
CAACTTAGGGTTTTCGAACCCCCGCCGGAAGGCTCCCGCCTTATTGTCTT
AGCCACCAACGTGGCTGAGACAAGTCTTACAATCCCGGGCATAAAGTACG
TGTTTGACTGTGGCAGAGCAAAGGAGAAGCAGTACGATCTTGCAACAGGC
GTCCAGAAATTCCAGATTGAATGGATCAGCAAGGCCAGTGCCAATCAGCG
AGCTGGACGTGCTGGTAGAACTGGACCCGGTCATTGCTACCGTCTATACT
CTTCGGCAATCTACGAGAATGAATTCGCCGAATACACCGACCCAGAGATT
CTGCGGACGCCGATCGAGGGTGTCGTACTTCAGATGAAGAGCATGGGACT
TCACAATGTTATCAACTTCCCATTCCCGACACCACCCAGCCGTCAGGGTC
TTGCCAAGGCTGAGAAACTTCTCAAGAACCTGGGCGCACTCACCTCCGAA
GGCCAGATCACCCCAATAGGTAACCGCCTATCTACGTATCCTCTGTCTCC
CAGATTTGGCAAGATGCTGTACGTTGGCCACCAGCACGGCTGTATGCCGT
ACGTCATCGCACTTGTTTCCGCCCTCGCAGTAGGCGATCTGTTTGTTCCC
GAGAACCAGATCGATCCTGTACCAGCCAACAAGGACGACAACGAGGGCAA
GGGTGTATACACGAACTCGGACCGTCTCGAAGACACCGCCCGGGAGCAGC
GCCACAAGGACTACGCCCGGGTGCACCGTCTCTTCAGCAAGCACGATGAT
ACTTCCGACGCGCTGAAGTACCTGTCGGCGATTTGCGCCTACGGATACGC
CTCCGACGGAGATTCGTTCTGTGAAAAGATGTTCCTGCGCGCAAAGGCCT
TCAAGGAAGCCACGCAGCTCCGTCGCCAGCTGACAGACATCGTGCGCAGC
AACAACCCGGGCCTGGTTCAGGCCTATCAGGCACGCTTGCCCGAACCGAC
CGAAAAGCAGGTCAAGGCCATCAAACAGATCATCACGGCTGGGTTCATCG
ACAATGTTGCTCTCCGCGCGGACCTTGCGCCCGTCCCGCCTGAGATGCAC
CGTACCCCCAAGCGAGCTATCGATGTCCCCTACTTCACGCTGATGCGGTC
TCGTGACGGCCCCGGCTTGGAGCTTGACGATAAGGCTGTCTATGTGCACC
CGTCGTCTGTCATTGCGCAGCTCTCGGCTAAGGAAATGCCCCAGTATATT
GTGTACTCGCATCTCCAGCAATCGTCGCCCTCCATTGTGTCTGCAGACCA
GACCCCTAAGATCCGGATGTATCCCCTCGCCACACCTAGCGGACTACAGC
TCTCTGCGCTGGCACACGGCACACCGCTGATCGAGTACGGCAAGCCCATC
GGCAAGACGGAGTTGATCGAGGGTATCCCTCAGCGGCGATCATGCTGGGT
GATCCCGTCTCTGGTGGGTGAGGCCGGCGGATCACGGTGGCCGTTACCAG
CCAAGAAGGTCATCCAAAGGAAGGATGCGAAGGAGGGATGGGTGATTGAA
AAATTTGTCGCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO:0004386helicase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003880KJC3_003880Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003880-T1.utr5p1KJC3_003880-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003880-T1.exon1KJC3_003880-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003880-T1.cdsKJC3_003880-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003880-T1.utr3p1KJC3_003880-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003880-T1KJC3_003880-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR002464
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR011709
DBxrefInterPro:IPR007502
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF07717
DBxrefPFAM:PF00271
DBxrefPFAM:PF04408
DBxrefPFAM:PF00270
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3320513..3324115 +
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