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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3340611..3342954+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003885-T1 ID=KJC3_003885-T1|Name=KJC3_003885-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2344bp|location=Sequence derived from alignment at ch3:3340611..3342954+ (Aspergillus niger KJC3)
CAAGCTGATCATAGTCAAAAGACCATTAATTATTCATGGGAACATTATTG
ATTAATGCCAGCTAACTAAGGTAAGGAGCTTACCGACTATCGCAGATTCG
ACCTCATTCACATTTCGAAGCCTCCGACACTCACTATAGTCGAGCAGAGG
AGAGCGCAGACAATGTCTATTACAGGGAATGAACCATCTGGGTAAAGTAC
AGACCAGGCGGAATCTACCAGATGAAGTGTCGTCCAATGGAAGTGCGTGT
TTGTTCTTCCTTTGTCTCTTGTTCTTGTAGGTTCAAATGCCACCGCATGA
TTTGCTTTCAATGATGGTAATGTGTTATGCTATCCTCGATAGCGGCAGTT
GTCAGAAGATGGCTTGACGATGAAATGGGTAGAAGGGTACTACCCTTGGT
GTGGTGGAAGTAACAAGATACTGATGACTCTATGATTTCAGTTACCTCGG
GTTCGACCACCGCACAGCAAGATAGGGGATGGAGAGTCTGCTAGAAGATA
GGACGAGTCTGAGACACAATTGTGATTGAAAGAAATCTCTTGGGACATTG
GCATACTGATATGGGAAACTCAGAGACACTCGCAATGCCGGTTGTCTGGA
CTCTACGGGTTCCACCACCATACAGCAAATCAGAAGATGGAGGGTTTGCT
GAAGGCTGATTGGAGTTTGAGACACCATGCTTTGACTGAAAGAATAGAGA
GGAAAGTGTTTCAGTGAGATTCGGACTTACGAGATACACGAGGTACGACA
AGAAAGACACTGTACACAATGCAATGTGGAGATAAGTGCCTCAACGGCTG
TGTCCGGCTTGTTGATTCGAAAGAGTTATTGTCTTCAAGACACCAGCAGG
TCACAAGATTGTTACCCAGAGGTCTCGATCAGCTATACTTAGCGATTAGA
TGGATGAGACCGAGAACAATATCCTTCATGGTTAACAGACACAGAACTGA
TGCTTCAACCTCAACTTATAAAGATGCCCATTACATCCATGGTCTGAGTG
AGGAAACCGCTCAACTCAACTCATCTCATCACATTTCGTCTTATCTCGAT
CTCATCTCAGACTCCCGTGCACCATGACTACTCCTGCTCTTGCTCCTGCT
CCAGCCCCAGCTCCAGCTTCTACTCCAGATCGCGTTCCAGCCCCAGCTCC
TATGTTTGTTCCCTTTAGGTCGGGCTTGGGTATAGCTCTAGACGCAGCTC
GAGCTCTGGTCCCTGTCCCAGCTTCGCCTCCAGATTTATGTTTCAGTTTC
CTTAACCCTGTCAGATTTCCGAAACTACCAAGTATGAAGTTGAGGCGCTA
TGTAGCCTGGCTACTAAGGGAGGCCGAGGTACCAGCCTTTCCATGGGGCC
CCGAGATAACGCGGATATACGGAAGTGAGAACAAATTCCAAGTAAGTATT
TCGAAACATTTCCTATCCCTTCACATTGTATCACCATTGTCAGCTGCTAA
TATAATAACCTGCACAGTACCACCTCTGGGCAGTAAAGGATGAGGAAATG
GAGAAGGCCGTGCAAGTGCTCGACAAGGCTGGATTGCCACCCTGCAAACA
TGGCCGTCGTTGCAAGGTCTTTGACCCTCAGTACACTGAACTTCCATTTC
CCGACCATCATTACCACACAGACCACAATTATCAAGTAAACGGTGTCACT
AAAGGTGTCTATCTGTACCGGAAGTCCCGACTTTTCCCATCTCTCCCTGA
TCCGCCGCTTGACGATCCGGAGCCTAAGGACCGATGCTATATGCTCAGTT
CTGACAGCCGGTTTCCGGACTGGAACATTGACCCTGCTGAGCGCTTGTCT
GAGCAAAAGTACCCTGTTACTATTCCTACGCCTGCCAGATATTTGGAAGC
CATCTGTCTGCTGGCTGTCCGTTATAGGGAAGGGCAGCATTCGAGTGCAT
TTTGGGACGAGGAAGAAGACCGGATGATGGATCTCCTGGGCGATAGGTTT
GTCGATGTACTACAATTGAGTGACCTTGACGAGCCATGGCATGAATATTG
CAGGCGAAATGTTGACCGCATTTATAGCGACCGTGTGGATGACTGGTGTG
GTCGTAAATACCAGGCCCTGATCTATGCTGATCTGAAGAAAAAGGGCCAG
CTTCAATCACCTGAGACAAAGGAAATCTTACGTACTAGATGGTTGAGCGG
ATTCTTCTCGGAACTTGCAAAGGCTCAGGGTCTGTCCCCAGATGCACTAT
TGAAGTGATAATTAGCTCGCTTCATGCGCCTCGTCGCTCTATTCATGTCT
TCACTCACACACTTTCCCTCACAGACACAGACACACACACACACACACAC
ACACACACACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCCC back to topCoding sequence (CDS) from alignment at ch3:3340611..3342954+ >KJC3_003885-T1 ID=KJC3_003885-T1|Name=KJC3_003885-T1|organism=Aspergillus niger KJC3|type=CDS|length=2118bp|location=Sequence derived from alignment at ch3:3340611..3342954+ (Aspergillus niger KJC3)
ATGACTACTCCTGCTCTTGCTCCTGCTCCAGCCCCAGCTCCAGCTTCTAC
TCCAGATCGCGTTCCAGCCCCAGCTCCTATGTTTGTTCCCTTTAGGTCGG
GCTTGGGTATAGCTCTAGACGCAGCTCGAGCTCTGGTCCCTGTCCCAGCT
TCGCCTCCAGATTTATGTTTCAGTTTCCTTAACCCTGTCAGATTTCCGAA
ACTACCAAGTATGAAGTTGAGGCGCTATGTAGCCTGGCTACTAAGGGAGG
CCGAGGTACCAGCCTTTCCATGGGGCCCCGAGATAACGCGGATATACGGA
AGTGAGAACAAATTCCAATACCACCTCTGGGCAGTAAAGGATGAGGAAAT
GGAGAAGGCCGTGCAAGTGCTCGACAAGGCTGGATTGCCACCCTGCAAAC
ATGGCCGTCGTTGCAAGGTCTTTGACCCTCAGTACACTGAACTTCCATTT
CCCGACCATCATTACCACACAGACCACAATTATCAAGTAAACGGTGTCAC
TAAAGGTGTCTATCTGTACCGGAAGTCCCGACTTTTCCCATCTCTCCCTG
ATCCGCCGCTTGACGATCCGGAGCCTAAGGACCGATGCTATATGCTCAGT
TCTGACAGCCGGTTTCCGGACTGGAACATTGACCCTGCTGAGCGCTTGTC
TGAGCAAAAGTACCCTGTTACTATTCCTACGCCTGCCAGATATTTGGAAG
CCATCTGTCTGCTGGCTGTCCGTTATAGGGAAGGGCAGCATTCGAGTGCA
TTTTGGGACGAGGAAGAAGACCGGATGATGGATCTCCTGGGCGATAGGTT
TGTCGATGTACTACAATTGAGTGACCTTGACGAGCCATGGCATGAATATT
GCAGGCGAAATGTTGACCGCATTTATAGCGACCGTGTGGATGACTGGTGT
GGTCGTAAATACCAGGCCCTGATCTATGCTGATCTGAAGAAAAAGGGCCA
GCTTCAATCACCTGAGACAAAGGAAATCTTACGTACTAGATGGTTGAGCG
GATTCTTCTCGGAACTTGCAAAGGCTCAGGGTCTGTCCCCAGATGCACTA
TTGAAGTGAATGACTACTCCTGCTCTTGCTCCTGCTCCAGCCCCAGCTCC
AGCTTCTACTCCAGATCGCGTTCCAGCCCCAGCTCCTATGTTTGTTCCCT
TTAGGTCGGGCTTGGGTATAGCTCTAGACGCAGCTCGAGCTCTGGTCCCT
GTCCCAGCTTCGCCTCCAGATTTATGTTTCAGTTTCCTTAACCCTGTCAG
ATTTCCGAAACTACCAAGTATGAAGTTGAGGCGCTATGTAGCCTGGCTAC
TAAGGGAGGCCGAGGTACCAGCCTTTCCATGGGGCCCCGAGATAACGCGG
ATATACGGAAGTGAGAACAAATTCCAATACCACCTCTGGGCAGTAAAGGA
TGAGGAAATGGAGAAGGCCGTGCAAGTGCTCGACAAGGCTGGATTGCCAC
CCTGCAAACATGGCCGTCGTTGCAAGGTCTTTGACCCTCAGTACACTGAA
CTTCCATTTCCCGACCATCATTACCACACAGACCACAATTATCAAGTAAA
CGGTGTCACTAAAGGTGTCTATCTGTACCGGAAGTCCCGACTTTTCCCAT
CTCTCCCTGATCCGCCGCTTGACGATCCGGAGCCTAAGGACCGATGCTAT
ATGCTCAGTTCTGACAGCCGGTTTCCGGACTGGAACATTGACCCTGCTGA
GCGCTTGTCTGAGCAAAAGTACCCTGTTACTATTCCTACGCCTGCCAGAT
ATTTGGAAGCCATCTGTCTGCTGGCTGTCCGTTATAGGGAAGGGCAGCAT
TCGAGTGCATTTTGGGACGAGGAAGAAGACCGGATGATGGATCTCCTGGG
CGATAGGTTTGTCGATGTACTACAATTGAGTGACCTTGACGAGCCATGGC
ATGAATATTGCAGGCGAAATGTTGACCGCATTTATAGCGACCGTGTGGAT
GACTGGTGTGGTCGTAAATACCAGGCCCTGATCTATGCTGATCTGAAGAA
AAAGGGCCAGCTTCAATCACCTGAGACAAAGGAAATCTTACGTACTAGAT
GGTTGAGCGGATTCTTCTCGGAACTTGCAAAGGCTCAGGGTCTGTCCCCA
GATGCACTATTGAAGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003885-T1.utr3p1 | KJC3_003885-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3340611..3342954 + |
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