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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3347444..3352946- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003887-T1 ID=KJC3_003887-T1|Name=KJC3_003887-T1|organism=Aspergillus niger KJC3|type=mRNA|length=5503bp|location=Sequence derived from alignment at ch3:3347444..3352946- (Aspergillus niger KJC3) GGAAAAGTGGCTTGGCGCACTTTTGCTCTGATTATATCTCCAAGTATCAA
CTTAGCTTCCCTGTCTCTTTGTTCTCTCGGCTGTGTTTGTTCGGCAGCAT
TCCTTTGTTTGCCTGAAATTGGAATACATGCTTTGACCGATCTTCCAACC
CCGGTTGCCCGACTACTAGTTGCCCACTGATATGCCGCTGGGACCAGCTC
TCCGAGTGTAACAATCGGTAAAAGCCTCATATATACGCCTTTGCGGATCT
TTCACGTCCCTGATCCATCCATATGACCTGCCAATGGTATGTGAGATTTT
GCGTAAAGTGGATCGCCGATGTAGAGCTGGTCAGTTCCAGCTGACCGGTG
ACCTTCCGTGGCCTCTAGTCACAATCCCGTCGCTGACCGGTCATCGGACA
GATATAATAATCCTCTGCCCTGAAGAAACCCATACGCACCCCCTCGTCCG
CTGGGACGCATGTCTTCTGACGATGCTCAATCCCCGTACTATACCAAGCA
CGCAGCATCAAGTTTTGTCGACGTACTCAAGTCACTAAGCATCTCCCGCC
CAAAGTCACCTTCTCCAATCTCGCTCCACGATAGCAGTGATTCTTTATCG
CATTCATCGGATGGACGCAGAATCAGTCGGACTGTACTGGGATTTGACTC
AATGCATCGTGGCAGCGTCGTATCCAGTTCTTCCGACACCTCTGGTGCAC
GGGATTTCGATACCGCAGTCCGAACGTTGGCTCAGAGGCAGTCTCTAAGC
CACGCTGTAGACGAGGCGGAACAAATATCAAAGTCACTCCAGTGGTTCAC
TCCGGAACAGTCGCTTGCTCTCTGGGAAGCAGGGGCGTATCTCTTCCACC
ATGAAAGTTCACCTGAAGCTCGACGGAGTGGTTCGATGTTGTTGGAAGCG
GTTGCGGCACGGCAAGACCTGTCGCCAGCAGCGCGGCGCATCGTCTTCGA
TTCGATAGCAAAGCCATCAGACAATGATGTTGTTCCCGCGCGTGTCCAGT
CTCTGATAGCCCTATCGGATCATGGCCGGAAGTTGGAGTTTGCAGCCTCG
TCCATTCTTCCTGTGATATCAGCTTGCTTGTTGCCATTATACGAATTAGT
TTCATCTGCGCGGTTGAAAGCCAGGAAAACCAAAGTCGGCAAAACAAACG
GGCTAGGATACGATGGCGCTGTATTAGATGACCTCCTACAATTCGCGATC
GATCTTATCACACTACAACGGAAGCCACCAAGCGACGAAGAAGTTCAGAT
GTTGTTAGAACAGACTTTCACGATTTGCCGAAAGACAAGCGTTGCTGCTG
ACATTAAGAACTCCTTGGGCGTTTTTGATGCGGTAATACTTTATGCAGAC
GTTCCGAATGGAAGCTTTGTTCCGATGCTCGAGGTATTATGCAGCATTCA
TGCATCTGTCAAATCGTTGTCCGGTCCCACGTCGAGAGCGGTCCGGAATC
TAGCAAAGTCGAGAAGACAGTCCGAGATGATGGAAAATTTACATGCTTTT
CTAAGGGAGTCCTGCGGCGAAAAGTGTCGTAACCTCAACGTTGTCCGAGG
AGCGGTTTATGTTTTCATGGATCTTGTGCGCGCGTATGGTCAAGATGGAA
TACCCAAATTTCAGTTCGAGCATTTGATAGAGTCGCTTCAGGTTGTTGTA
AAGAAGGATGATGGCCGGTTGGAAGCGGATATCTTGGAGCTGTGTTTGAA
CGTTTTGGAAGGTGACTACGTTCACACGGCCCTGAACAATGACTGGAGCG
AGTTTGTGAATTTATTGAATGCATGCTCTCTCAGGGCCGTTGACGAACAC
GAAGAATCCTCCTTCACAATGCCTGATGCCCAGCCGCGCGGCAGCGTGTT
AGACGACACACGGTCTAACATTCTGGCCAGCACCATTCAAATCGCATCTA
CCCTGGAAGCCCTTTGGGATCGCTTGAATCATCAGCAGCGGCTAGATGCC
ACCCGTTTCCTAATGAATGCCTGTCGACATATCGAGCCTCCCCAGGCCGA
GCTCGTCCTCAACACTATCCGCACCGAAGGGTTTTGCTCACCCGAGAGCC
CGGATTGGGTGCAGCAGAACCAACGTCTCATCCGATGCTTCATCCGCTCC
CGCAGCAAACCATCCGACGTTCGGATCCTGGCTTTGGATACTGTGAAGGA
TTCTTTCTCAACATATGATTCTCTGGTCCTCTTCCAGGAACACGGACTCC
TTGACCTCATGCTGGAAAGGTTTGCTGAGGAAGACGATATTTTGTTTCTA
GAATCTTTGGTCTCTTTCCTTGTCGATGCTTCCGTGCTCGTCAGTGATAA
TGAAAGTTTCAAGCGCTTGGTGGCAGTGTTAAGCGCGCCAATGAGTAAAG
ACCTGGACAAAGAGGGTATGATCGGCTCTGAGACTTCGACAACTTTGTCT
TCGGAACGCCGTTCTTTTAGCAGTGTTATGGAGCTGTCCTTGGCCAATAT
TTGCACTATTGGGCTTGTCAGGATGTTTCTCCGATCCCTTAATATGTCAG
CGTCTAAGGCGGCTTTGGTGTATGAAGCACTCTTGAACATAGCTCAATGC
TCGGAGCGGCCGGTGGACTCGCGTTTGACATCACTAAAGCTATTATTCCG
ACTGCGATGCGATTCGTCGGGCTCGATTACCGTGACCTCCGTCTCTGAAC
AGGATTTCACGATGAACGTTTCTGGGCGAAATGTCGAGGCAGGCTCCAAG
CAACAGGGTGACTCGGCTGTTGAACACAACGTTGATAGCGACCAAGGGCG
ACCAGCAGCCCATGCAAGGCATTCGGCTCGGGAGCCATCGGTGCTTTCTA
GGTCGTCAGGACGTAATCCAAGCATTCCCATTCGGGCTTCAAGACTGACG
CCTCCAATTTGGACCTTTGCGACCCCGCAAGCCCTTCCTGAAGCGCCCCC
CGATGAGTCGAGTCCATTCGTATACGCTTATGCGACGCCGGAAACGAGTC
ACACCTTAGAATCAGAATCTGCGCAAAAGGTCGCATTGAAGGCAAACATG
TGGCTTGAGACAGTCATCTCATTGCTGCAACGTGAATCCAACTGGGATCT
CTACAGCTACGTCCTCACCCATCTTGCAAGCCAACTTCAGAATAAAGATC
TCTTCAGCAACGCAGTTCCTCAAATCAAATTACTGCGTAGTATCCTTTGC
GATCAGGTGAAGAACGACACGTTCCGTGAGCCGCCACCGTCCACTGGTGG
GAAGAAGACTGACGTGGCTGGCTACATCTTCGAGTTTCTCTGCTCGCTAA
TCAGCTATCATGAACATTTTGCCAAAAGCGAAGAAGATGAGCTTGTTCGC
GCATTCATGATGGGTATAATTGGATCATGGGGTGGTACTTCGCGCGGATG
CATTCATGCACTCTCTGTCTGTTGTCATGAAATTCCGCTCTCGGTGACCA
AGTCCCTCAACGGAATCCTTGACAAAATGTCCAAAGTGATCACGATGTCC
AATCTTGCTGTGCATATCTTGGAATTCTTGGCTCTTCTTGCACGCCTTCC
TGATGTCTATATTAATCTACGTGAGGAAGAGATTCGCACTGTTTTTGGTA
TCTGTATTCGATTCTTGCAGACCTCCAGAGAGCAGCGGTTTAAGGCTTCT
GAGTCGCCCACCAGGAATGTTCAGGTTCCGGCAAGGCTTGGGAGCGGTGT
CCGAGATACTATGGCTTCGCCCGCAGAGTCGTCTGATTCTTCACTCCAGG
ATGGGATGTCCAGATACATCTATACTCTTACGTATCATGTCATGATCTTT
TGGTTTCTTTCATTGAAATTGCAGGATCGAGCCAAGCACGTGAATTGGAT
AACTAGCAGACTCATATACCGGGATGAACACGGTAGAGAGACGGTTGAGG
AGCCAAGCCAGGTCTTCATCGACTTGATGCAGAGAGCAGCTTTCTCGGAC
TTGGGAGACACTATACCATACCCAAACTTTCCTCCGACTCCGGAAGATGG
GCCTGTAGTGAAGAAGTCATGGATTGTAGGTATGAGCATTGTGACTGTTG
AGACGGCTGGAGTATCTGGCTTGACTCAGGTCACCAAAAGGCAAGCGTCA
GGAACTACCTACGCAATGTTTCAGCAACGAACTGCGCCCGTCCTTCCTCA
CCAGGTTCCGCCCACGCCAGATGCCCACTTGCATTCTGACACCATGCGCA
CTGCTGTCCTTCCAAGCCATATCATGCTTCAGCTGACAACCACGGCTTTC
CCGACTCCTACGGTGATGCAGCCAATTCCTCTTCCCGAAGATGACATTAC
ACGCCGAGCACTAAACACCTTCGACCGCAACGACATTGTGGATGGGCACA
AGATTGGTGTTATATACATCGACAATGGCCAGACCACTGAAGCAGAGATC
CTGTCGAATACCAGCGGCAGCCCAGACTACGAATACTTTCTGTCGCGACT
CGGAACCAAGGTTCCGCTCCAGGGTGCTCGATTTAATACTCAGGGGTTGC
ATGCAGATTTCGATGGCCAATTCACCTATGCATGGCGTGACCGGGTTACG
GAAATTGTCTACCATGTTCCGACAATGATGCCTACGAACTTTGATAATGA
TCCATCCTGCATCAGCAAGAAACGCCACATCGGGAATGATTTCGTCAATA
TCGTGTTCAACCGGTCGAATACACCTTTCAACTTCAACACGATACCCTCT
CAGTTCAACTTTGTCAACATCGTTATTAACCCTGTGTGCCGTCTCACCAC
TGATCCTGGCAGTGCGGAGTCGAGACGCACGGATTTTGAGAACATGTTCT
ACCAGGTGAAGGTGATGAGCAAGCCCGGGTTTCCGGAAATATCACCTGCC
GCGGTGCCAAAACTTATCTCCGGGAAGAACCTTGCCCCGTTCGTTCGCAT
TCTTGCTCTTAACGCGTCTGTCTTCTCGCTCGTCTGGCACAGCCAAGGAG
GGGAGCACATTTCATCGTGGCGCAACAGGTTGCGTGAAATTAAGAGACTT
CGTGAGCGAGCGCTAGGAAACCAGGCTCAAAGTTCCGAGGCTGCCGAAGG
GACTTATCCTGGTCAGCGCCGCAACACCAAAGCCAACATATTCTCCGAAG
AAGTGCCCTCGCGCAACACCTCGGTCCGGACCGATTTTGCTACCGATTGG
AACGCAGCTGCAGACACGAATATCCTGCAGAACTTGGACTTTTCGCGCTG
GGGTCGTTGAAAGCCACATGCTGTCTTGGTTTAGCAGGCAAAGAAGAATG
GAAGAACGAGGGCCAGAGAAGGAAAAGAAAAGAAAAGAAACAACAATCAC
TTTCCAGGATTTCATTGACTCACTCATGACCCTTTTGCTACGACGGATGA
CTGTACATCTTAACACCGATGCTTTGCAACTTGTGTAAATACCCCCTTTT
GCCCTGCAGCACGCGAAGAAAAAAAGTTCACTGTTCTCAATGTCTTGTTT
TTTCCCTCTTTCTTTTCCATTGCGATGCTTTACTGCCCTGGCCCACTCTG
GCAAACCTTGAGGAATGAAATAAATAATCAGTTATGTCAACAGATGTATC
GGA back to topCoding sequence (CDS) from alignment at ch3:3347444..3352946- >KJC3_003887-T1 ID=KJC3_003887-T1|Name=KJC3_003887-T1|organism=Aspergillus niger KJC3|type=CDS|length=4701bp|location=Sequence derived from alignment at ch3:3347444..3352946- (Aspergillus niger KJC3) ATGTCTTCTGACGATGCTCAATCCCCGTACTATACCAAGCACGCAGCATC AAGTTTTGTCGACGTACTCAAGTCACTAAGCATCTCCCGCCCAAAGTCAC CTTCTCCAATCTCGCTCCACGATAGCAGTGATTCTTTATCGCATTCATCG GATGGACGCAGAATCAGTCGGACTGTACTGGGATTTGACTCAATGCATCG TGGCAGCGTCGTATCCAGTTCTTCCGACACCTCTGGTGCACGGGATTTCG ATACCGCAGTCCGAACGTTGGCTCAGAGGCAGTCTCTAAGCCACGCTGTA GACGAGGCGGAACAAATATCAAAGTCACTCCAGTGGTTCACTCCGGAACA GTCGCTTGCTCTCTGGGAAGCAGGGGCGTATCTCTTCCACCATGAAAGTT CACCTGAAGCTCGACGGAGTGGTTCGATGTTGTTGGAAGCGGTTGCGGCA CGGCAAGACCTGTCGCCAGCAGCGCGGCGCATCGTCTTCGATTCGATAGC AAAGCCATCAGACAATGATGTTGTTCCCGCGCGTGTCCAGTCTCTGATAG CCCTATCGGATCATGGCCGGAAGTTGGAGTTTGCAGCCTCGTCCATTCTT CCTGTGATATCAGCTTGCTTGTTGCCATTATACGAATTAGTTTCATCTGC GCGGTTGAAAGCCAGGAAAACCAAAGTCGGCAAAACAAACGGGCTAGGAT ACGATGGCGCTGTATTAGATGACCTCCTACAATTCGCGATCGATCTTATC ACACTACAACGGAAGCCACCAAGCGACGAAGAAGTTCAGATGTTGTTAGA ACAGACTTTCACGATTTGCCGAAAGACAAGCGTTGCTGCTGACATTAAGA ACTCCTTGGGCGTTTTTGATGCGGTAATACTTTATGCAGACGTTCCGAAT GGAAGCTTTGTTCCGATGCTCGAGGTATTATGCAGCATTCATGCATCTGT CAAATCGTTGTCCGGTCCCACGTCGAGAGCGGTCCGGAATCTAGCAAAGT CGAGAAGACAGTCCGAGATGATGGAAAATTTACATGCTTTTCTAAGGGAG TCCTGCGGCGAAAAGTGTCGTAACCTCAACGTTGTCCGAGGAGCGGTTTA TGTTTTCATGGATCTTGTGCGCGCGTATGGTCAAGATGGAATACCCAAAT TTCAGTTCGAGCATTTGATAGAGTCGCTTCAGGTTGTTGTAAAGAAGGAT GATGGCCGGTTGGAAGCGGATATCTTGGAGCTGTGTTTGAACGTTTTGGA AGGTGACTACGTTCACACGGCCCTGAACAATGACTGGAGCGAGTTTGTGA ATTTATTGAATGCATGCTCTCTCAGGGCCGTTGACGAACACGAAGAATCC TCCTTCACAATGCCTGATGCCCAGCCGCGCGGCAGCGTGTTAGACGACAC ACGGTCTAACATTCTGGCCAGCACCATTCAAATCGCATCTACCCTGGAAG CCCTTTGGGATCGCTTGAATCATCAGCAGCGGCTAGATGCCACCCGTTTC CTAATGAATGCCTGTCGACATATCGAGCCTCCCCAGGCCGAGCTCGTCCT CAACACTATCCGCACCGAAGGGTTTTGCTCACCCGAGAGCCCGGATTGGG TGCAGCAGAACCAACGTCTCATCCGATGCTTCATCCGCTCCCGCAGCAAA CCATCCGACGTTCGGATCCTGGCTTTGGATACTGTGAAGGATTCTTTCTC AACATATGATTCTCTGGTCCTCTTCCAGGAACACGGACTCCTTGACCTCA TGCTGGAAAGGTTTGCTGAGGAAGACGATATTTTGTTTCTAGAATCTTTG GTCTCTTTCCTTGTCGATGCTTCCGTGCTCGTCAGTGATAATGAAAGTTT CAAGCGCTTGGTGGCAGTGTTAAGCGCGCCAATGAGTAAAGACCTGGACA AAGAGGGTATGATCGGCTCTGAGACTTCGACAACTTTGTCTTCGGAACGC CGTTCTTTTAGCAGTGTTATGGAGCTGTCCTTGGCCAATATTTGCACTAT TGGGCTTGTCAGGATGTTTCTCCGATCCCTTAATATGTCAGCGTCTAAGG CGGCTTTGGTGTATGAAGCACTCTTGAACATAGCTCAATGCTCGGAGCGG CCGGTGGACTCGCGTTTGACATCACTAAAGCTATTATTCCGACTGCGATG CGATTCGTCGGGCTCGATTACCGTGACCTCCGTCTCTGAACAGGATTTCA CGATGAACGTTTCTGGGCGAAATGTCGAGGCAGGCTCCAAGCAACAGGGT GACTCGGCTGTTGAACACAACGTTGATAGCGACCAAGGGCGACCAGCAGC CCATGCAAGGCATTCGGCTCGGGAGCCATCGGTGCTTTCTAGGTCGTCAG GACGTAATCCAAGCATTCCCATTCGGGCTTCAAGACTGACGCCTCCAATT TGGACCTTTGCGACCCCGCAAGCCCTTCCTGAAGCGCCCCCCGATGAGTC GAGTCCATTCGTATACGCTTATGCGACGCCGGAAACGAGTCACACCTTAG AATCAGAATCTGCGCAAAAGGTCGCATTGAAGGCAAACATGTGGCTTGAG ACAGTCATCTCATTGCTGCAACGTGAATCCAACTGGGATCTCTACAGCTA CGTCCTCACCCATCTTGCAAGCCAACTTCAGAATAAAGATCTCTTCAGCA ACGCAGTTCCTCAAATCAAATTACTGCGTAGTATCCTTTGCGATCAGGTG AAGAACGACACGTTCCGTGAGCCGCCACCGTCCACTGGTGGGAAGAAGAC TGACGTGGCTGGCTACATCTTCGAGTTTCTCTGCTCGCTAATCAGCTATC ATGAACATTTTGCCAAAAGCGAAGAAGATGAGCTTGTTCGCGCATTCATG ATGGGTATAATTGGATCATGGGGTGGTACTTCGCGCGGATGCATTCATGC ACTCTCTGTCTGTTGTCATGAAATTCCGCTCTCGGTGACCAAGTCCCTCA ACGGAATCCTTGACAAAATGTCCAAAGTGATCACGATGTCCAATCTTGCT GTGCATATCTTGGAATTCTTGGCTCTTCTTGCACGCCTTCCTGATGTCTA TATTAATCTACGTGAGGAAGAGATTCGCACTGTTTTTGGTATCTGTATTC GATTCTTGCAGACCTCCAGAGAGCAGCGGTTTAAGGCTTCTGAGTCGCCC ACCAGGAATGTTCAGGTTCCGGCAAGGCTTGGGAGCGGTGTCCGAGATAC TATGGCTTCGCCCGCAGAGTCGTCTGATTCTTCACTCCAGGATGGGATGT CCAGATACATCTATACTCTTACGTATCATGTCATGATCTTTTGGTTTCTT TCATTGAAATTGCAGGATCGAGCCAAGCACGTGAATTGGATAACTAGCAG ACTCATATACCGGGATGAACACGGTAGAGAGACGGTTGAGGAGCCAAGCC AGGTCTTCATCGACTTGATGCAGAGAGCAGCTTTCTCGGACTTGGGAGAC ACTATACCATACCCAAACTTTCCTCCGACTCCGGAAGATGGGCCTGTAGT GAAGAAGTCATGGATTGTAGGTATGAGCATTGTGACTGTTGAGACGGCTG GAGTATCTGGCTTGACTCAGGTCACCAAAAGGCAAGCGTCAGGAACTACC TACGCAATGTTTCAGCAACGAACTGCGCCCGTCCTTCCTCACCAGGTTCC GCCCACGCCAGATGCCCACTTGCATTCTGACACCATGCGCACTGCTGTCC TTCCAAGCCATATCATGCTTCAGCTGACAACCACGGCTTTCCCGACTCCT ACGGTGATGCAGCCAATTCCTCTTCCCGAAGATGACATTACACGCCGAGC ACTAAACACCTTCGACCGCAACGACATTGTGGATGGGCACAAGATTGGTG TTATATACATCGACAATGGCCAGACCACTGAAGCAGAGATCCTGTCGAAT ACCAGCGGCAGCCCAGACTACGAATACTTTCTGTCGCGACTCGGAACCAA GGTTCCGCTCCAGGGTGCTCGATTTAATACTCAGGGGTTGCATGCAGATT TCGATGGCCAATTCACCTATGCATGGCGTGACCGGGTTACGGAAATTGTC TACCATGTTCCGACAATGATGCCTACGAACTTTGATAATGATCCATCCTG CATCAGCAAGAAACGCCACATCGGGAATGATTTCGTCAATATCGTGTTCA ACCGGTCGAATACACCTTTCAACTTCAACACGATACCCTCTCAGTTCAAC TTTGTCAACATCGTTATTAACCCTGTGTGCCGTCTCACCACTGATCCTGG CAGTGCGGAGTCGAGACGCACGGATTTTGAGAACATGTTCTACCAGGTGA AGGTGATGAGCAAGCCCGGGTTTCCGGAAATATCACCTGCCGCGGTGCCA AAACTTATCTCCGGGAAGAACCTTGCCCCGTTCGTTCGCATTCTTGCTCT TAACGCGTCTGTCTTCTCGCTCGTCTGGCACAGCCAAGGAGGGGAGCACA TTTCATCGTGGCGCAACAGGTTGCGTGAAATTAAGAGACTTCGTGAGCGA GCGCTAGGAAACCAGGCTCAAAGTTCCGAGGCTGCCGAAGGGACTTATCC TGGTCAGCGCCGCAACACCAAAGCCAACATATTCTCCGAAGAAGTGCCCT CGCGCAACACCTCGGTCCGGACCGATTTTGCTACCGATTGGAACGCAGCT GCAGACACGAATATCCTGCAGAACTTGGACTTTTCGCGCTGGGGTCGTTG A back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
| GO:0005096 | GTPase activator activity |
Vocabulary: Biological Process
| Term | Definition |
| GO:0051056 | regulation of small GTPase mediated signal transduction |
| GO:0043547 | positive regulation of GTPase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
| KJC3_003887-T1.utr3p1 | KJC3_003887-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR035974 |
| DBxref | InterPro:IPR024584 |
| DBxref | InterPro:IPR000331 |
| DBxref | InterPro:IPR018515 |
| DBxref | PFAM:PF03542 |
| DBxref | PFAM:PF02145 |
| DBxref | PFAM:PF11864 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| ch3 | supercontig | ch3:3347444..3352946 - |
|