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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3362724..3364087- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003893-T1 ID=KJC3_003893-T1|Name=KJC3_003893-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1364bp|location=Sequence derived from alignment at ch3:3362724..3364087- (Aspergillus niger KJC3)
CTTCACCATCACAATCCTCCGAAATTGCGGCGCATAAACCAATATGCCTC
ATATTGATTCAGAGGCGCCAGCTCCGGCGGCCGAAGCTCCTACCGAGCAA
TTAACAAGACTGCCTTTCCCTCCAGTCACTTATTCTCACATCCTACACTG
CTCTTATCACCACTGGCAGCCTCGGTATGTGCCCAGTATAACCCCTCTAT
ACGTTAATGAAGGTACTAATTTAAATACACCGCCGCAGATACCGCACCCT
GGTCCCCAAGTCCCGCGCTATCCGTCTCACTGCCCCCTTCGTTAAGTACC
TCCGAGCGGACGGTATCGTCCTGCCGCCAGAAGCTGCCCCGCCGACAGAC
GACGACAACCTCGACACATTCTCCGATGATGGCGCAGACGAGGAGCCCGA
CCCGTCAGTCGAATGGCCTGAAATCCACAACCAGATCAAGTCCACAATCA
CCGAATACGGCGGTAAAGTGACGCCGAAGCTGAACTGGAGTGCGCCCAAA
GATGCGACGTGGATGTCCGCCACCAACGACACGCAATGTCGCACAGCCAA
CGACATCTACCTCCTCTTGAAAAGCAGTGACTTTATCAGCCATGACCTGG
AACACCCATTCGACGACTGCGTTTCTGACACTACCACCACCGACGATTCT
TCCTCAACGCCCCCCGAAATCCCCTACTACCTCGTTCTTCGCAAATACGT
CAACTTCAACCCGTCGCTCGAGTTCCGGTGCTTCGTGCGCAACAGAGTCC
TCCTGTGCATGTGCCAGCGTGATCAGAACCATTTCGACTTCCTCTTCCCC
ATGCGGGACTCTCTCCGGTCTCGGATCCAGACCTTCTTCGATGAAAAGCT
GAAGGATACGTTCACGGACCCTAACTTCGTGTTTGATGTCTATATCCCGC
CTCCCCATGACCGAGTGTGGCTTATCGATATCAACCCATGGGCGGAGAGG
ACCGACTCACTGCTCTTCAGTTGGATGGAGATTCTGCATATGAAGGATCC
CGTGGGTATCCGGGAGGAAGACGACAATGGGGAAGAGCAATTTGTGCGGC
TTTCTCTGAATGGAAACGGTGGACTGGAGGCAGGTGCTGAGCCAGATGAA
GGGTCCGAATCCGAGTCCGAGTCCGCGTCCGAAGACGAGAATGTAGATGA
TGCACCATTGTTCCCAGAGTTCAGGCTAATCAAGCGCGATGACCCGGAGG
CGTATGCGTTCACGACCCCGCAGTACTCAGCACACAAGCTGCCCAAGGAA
GTGGTCGACGCCTCTATCTCCGGTCCTGGAGGCATGAGCGAGTTTCTGGG
GAAATGGCAGGACATTCTGGCGAAGCAGGCGCAGGAGTCCGACTCGGACA
ATGAAGACCAATAG back to topCoding sequence (CDS) from alignment at ch3:3362724..3364087- >KJC3_003893-T1 ID=KJC3_003893-T1|Name=KJC3_003893-T1|organism=Aspergillus niger KJC3|type=CDS|length=2514bp|location=Sequence derived from alignment at ch3:3362724..3364087- (Aspergillus niger KJC3)
ATACCGCACCCTGGTCCCCAAGTCCCGCGCTATCCGTCTCACTGCCCCCT
TCGTTAAGTACCTCCGAGCGGACGGTATCGTCCTGCCGCCAGAAGCTGCC
CCGCCGACAGACGACGACAACCTCGACACATTCTCCGATGATGGCGCAGA
CGAGGAGCCCGACCCGTCAGTCGAATGGCCTGAAATCCACAACCAGATCA
AGTCCACAATCACCGAATACGGCGGTAAAGTGACGCCGAAGCTGAACTGG
AGTGCGCCCAAAGATGCGACGTGGATGTCCGCCACCAACGACACGCAATG
TCGCACAGCCAACGACATCTACCTCCTCTTGAAAAGCAGTGACTTTATCA
GCCATGACCTGGAACACCCATTCGACGACTGCGTTTCTGACACTACCACC
ACCGACGATTCTTCCTCAACGCCCCCCGAAATCCCCTACTACCTCGTTCT
TCGCAAATACGTCAACTTCAACCCGTCGCTCGAGTTCCGGTGCTTCGTGC
GCAACAGAGTCCTCCTGTGCATGTGCCAGCGTGATCAGAACCATTTCGAC
TTCCTCTTCCCCATGCGGGACTCTCTCCGGTCTCGGATCCAGACCTTCTT
CGATGAAAAGCTGAAGGATACGTTCACGGACCCTAACTTCGTGTTTGATG
TCTATATCCCGCCTCCCCATGACCGAGTGTGGCTTATCGATATCAACCCA
TGGGCGGAGAGGACCGACTCACTGCTCTTCAGTTGGATGGAGATTCTGCA
TATGAAGGATCCCGTGGGTATCCGGGAGGAAGACGACAATGGGGAAGAGC
AATTTGTGCGGCTTTCTCTGAATGGAAACGGTGGACTGGAGGCAGGTGCT
GAGCCAGATGAAGGGTCCGAATCCGAGTCCGAGTCCGCGTCCGAAGACGA
GAATGTAGATGATGCACCATTGTTCCCAGAGTTCAGGCTAATCAAGCGCG
ATGACCCGGAGGCGTATGCGTTCACGACCCCGCAGTACTCAGCACACAAG
CTGCCCAAGGAAGTGGTCGACGCCTCTATCTCCGGTCCTGGAGGCATGAG
CGAGTTTCTGGGGAAATGGCAGGACATTCTGGCGAAGCAGGCGCAGGAGT
CCGACTCGGACAATGAAGACCAATAGATGCCTCATATTGATTCAGAGGCG
CCAGCTCCGGCGGCCGAAGCTCCTACCGAGCAATTAACAAGACTGCCTTT
CCCTCCAGTCACTTATTCTCACATCCTACACTGCTCTTATCACCACTGGC
AGCCTCGATACCGCACCCTGGTCCCCAAGTCCCGCGCTATCCGTCTCACT
GCCCCCTTCGTTAAGTACCTCCGAGCGGACGGTATCGTCCTGCCGCCAGA
AGCTGCCCCGCCGACAGACGACGACAACCTCGACACATTCTCCGATGATG
GCGCAGACGAGGAGCCCGACCCGTCAGTCGAATGGCCTGAAATCCACAAC
CAGATCAAGTCCACAATCACCGAATACGGCGGTAAAGTGACGCCGAAGCT
GAACTGGAGTGCGCCCAAAGATGCGACGTGGATGTCCGCCACCAACGACA
CGCAATGTCGCACAGCCAACGACATCTACCTCCTCTTGAAAAGCAGTGAC
TTTATCAGCCATGACCTGGAACACCCATTCGACGACTGCGTTTCTGACAC
TACCACCACCGACGATTCTTCCTCAACGCCCCCCGAAATCCCCTACTACC
TCGTTCTTCGCAAATACGTCAACTTCAACCCGTCGCTCGAGTTCCGGTGC
TTCGTGCGCAACAGAGTCCTCCTGTGCATGTGCCAGCGTGATCAGAACCA
TTTCGACTTCCTCTTCCCCATGCGGGACTCTCTCCGGTCTCGGATCCAGA
CCTTCTTCGATGAAAAGCTGAAGGATACGTTCACGGACCCTAACTTCGTG
TTTGATGTCTATATCCCGCCTCCCCATGACCGAGTGTGGCTTATCGATAT
CAACCCATGGGCGGAGAGGACCGACTCACTGCTCTTCAGTTGGATGGAGA
TTCTGCATATGAAGGATCCCGTGGGTATCCGGGAGGAAGACGACAATGGG
GAAGAGCAATTTGTGCGGCTTTCTCTGAATGGAAACGGTGGACTGGAGGC
AGGTGCTGAGCCAGATGAAGGGTCCGAATCCGAGTCCGAGTCCGCGTCCG
AAGACGAGAATGTAGATGATGCACCATTGTTCCCAGAGTTCAGGCTAATC
AAGCGCGATGACCCGGAGGCGTATGCGTTCACGACCCCGCAGTACTCAGC
ACACAAGCTGCCCAAGGAAGTGGTCGACGCCTCTATCTCCGGTCCTGGAG
GCATGAGCGAGTTTCTGGGGAAATGGCAGGACATTCTGGCGAAGCAGGCG
CAGGAGTCCGACTCGGACAATGAAGACCAATAGATGCCTCATATTGATTC
AGAGGCGCCAGCTCCGGCGGCCGAAGCTCCTACCGAGCAATTAACAAGAC
TGCCTTTCCCTCCAGTCACTTATTCTCACATCCTACACTGCTCTTATCAC
CACTGGCAGCCTCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003893-T1.utr5p1 | KJC3_003893-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264WF4 |
| DBxref | InterPro:IPR009772 |
| DBxref | PFAM:PF07065 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3362724..3364087 - |
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