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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3364266..3366972+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003894-T1 ID=KJC3_003894-T1|Name=KJC3_003894-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2707bp|location=Sequence derived from alignment at ch3:3364266..3366972+ (Aspergillus niger KJC3)
CATCATTCCAGGCAGTGCTCCGGCTGGCATTGATGCCCTGCATTGTTGGC
TTGTCCCGCCAGCGTCCTTTCCTTTCACCATGGCGTCTGATGGCCCGGAT
CCCCAGTCATTGAAGTCCTGGCAGGATGCATTTCACTATCCAATTCCTAC
TGTGCGCCGCGTGGAGCAGGAGCTGCGCCGGGACATCGCAAGCAATAAGG
AGAAGCTCAGGGCTCTTGTCGGGTATGTGAAAGCAAACCCTCATGATATC
TATATGCAGGACTAATCATATATGGCGCATCTAGTACGAGATACCGAGAA
CTTATTGGCACTGCCGAGACGATCGTGTCGATGAACCGCGAAATGGAGGA
TGTGGATTCGACGCTGGCCGACATAGGACGAAGATGCAATCCACGCCTGA
TGGAGAAGATGTACACACATTACAATCAGATAAAGGATGATAGCCATGAT
GAAGGTATGTTATTGTCGTGAGTTTGGATTTGGTTACAACCAACAGCTGA
TGGGGATTAGATGCCGCGAAACGAGCGCTCGGAGGGCAACTGGCCTTGCT
TCATCGCTGCGCATCGTCAATCTCCAAGCTTTTGCGACGACGCGGCTCCG
TCTTGCTTGTGGCGAAGCTTATGGTCATCTCTCGCCTTCTACACAAGACC
CTGTCCCAGCAGACAACGGTACCACCATTTGTGGAGGACCTGCGCAATCA
ATTGGCGTCCCTTCGGCGAAGTCTGTTGAGGAGGCTCGAAAAGCGTCTCG
CGTCTGCTAAGTATGCGGCTGATGAGATTATTGAGGCCTTGGCAGCGTAC
TGTCTTACAACTAGCTCTTCCTCAGATGACGCTATTCGTTACTTTCACCA
GGTTCGCTTAGATGGTATTGGAGGCCAGTTGGAGCTTGTCGACCCGTCAG
GCGAGAATGTCCTGAACAGCTTACGACTATATGTTCGGACCCTCCAAACT
TCTAAGATCCTGCTATCTCGCCGTTTGTCTGATGTTCTAAGCAAACTGAA
AGCACGGCCCCTGCTGACAGACCCTGAAATTCGGAGTTTGGACGACCTAG
ACCTCGGTGTTCTGGGACGCTGGGTTGCCGCAGATGTTAATAACTTCACA
CCATGGATCAAGCTTAGTGAGTTATCGAAGTCGGATGCCGAGAAGACGAT
CAAGCAATGGTCCAAACCGGCTTTTGATAGATTCTTAGACGGGTGCCGGG
GCACCCTCACAAACTGGCTGGACTTCTCGAAACTTCTCTCGTTACGCAAG
CAGACATTGGAGCTCTGGCTATCTTCCCGGAGCTCGACACCCACCCATTC
ATCGTTACAAGTTCTGGAGGGAATTAGGTCGGTCTTTAATGATCGACTTA
AAGGGATTCTGTCAGAACAAGCTAAAACATTGGATGTATTCGGTCAAGGC
GTCGCTTCTGGAGTGTCGCATTGGGGCGACAGAGCCCACACGGCTTCGCA
GTCACTTTGGGCCGAGGACTTGATTTCCCTTGACTATTCCAACGGCTCTG
CTGCGTTCAAGCAAGCTGTCACGCACAGACTCCTGGGCCGTGATGATGAC
GTATCCGCTGTCCTTGAGAAATACCATGGATGGTTGTCTGTCATCGAGGA
GTCCAGGGAGTCTATCGATGGCCTACGGCAGATACGTTGGGCTGACGTCT
TGGACGAAGGCGAGGACGAGGATCTTGATATCGATGTTCCTGCCATGTTA
AACGACGACGATCCACGACTGCTGCGCGAAGCCCTTCAGGCGGCAATTGA
GCAAGCATTCGAAACACTCCAAAATTCGCTCAGCACAACCTTCGACACAC
TTGAGAAGCCGGGACAAAGCGGTGAGGCCGCTTTTATGCTGAAGACTATC
CGACTGGCTCGAAGAGATCTGCCTGCCCAGTTCATTTCGAGCGATTATGC
ACTGTCCCAGAGCATTGTGCCGGAGTTGCAGAAAATTCTTGCTACTGACA
TAGTCGCCCGCACAGGACCCTGGAAGTCTCCGGCTACTTCGAAATCGAAG
TCTGGAAAAGTGCCAGGTCGCACACTTTGGGAAGGTGATCCTGAAATCCC
TGTCCAGCCGACACCATCGACGTTCAAATACCTGCGTAGACTTGTGCGTT
CTATGGATCAGTACGGCGCCGGGCTTTGGGATGCTTCCACAACCCAAACG
CTAAAGAGCGCCATGCTCGATGAGATCTCAAAGGCGATCAAATCTTCCCT
TGAGAACCTTAACTCACCTGTCGATCATGAGGACAGCAAAAAGTCTGCCT
CACAGGATGATGAAGAGACGGAATCGGCACGGAACGGCGAGGATAGCGAC
CCGGCGAAGCCAGAAACTGAAAGTATCGAATCAGACAGTGCGGCCGATGT
CAAGGACCGGAAGATACAGCTATACTTCGATTCCGTCTATCTGAATGATG
CGTTTGCGGTTCAACACTCTGAGCGCAGCCAGTTGACAGAAGTATTGGGT
ACACTTCGCAGCAGTCTCGACTTGCCTGCGAAGGCGACAAAGAACCTAGA
GAACGCTGCGCGCGAGTACTGGAAACGGACCCAGCTATTATTTGGGCTCT
TAACCATGGGATCTGAGCTCTAAACAGGCTGCCAGTGGCATGAAACAATG
TATATAGATCATAACCATATCATCATCGGACAATCCAGTTCATACCATCT
TCATACCTCCTGTGACCGGCCAATGAGCGTGCGTATGTATAACCTTCCTG
ATCGGGC back to topCoding sequence (CDS) from alignment at ch3:3364266..3366972+ >KJC3_003894-T1 ID=KJC3_003894-T1|Name=KJC3_003894-T1|organism=Aspergillus niger KJC3|type=CDS|length=7128bp|location=Sequence derived from alignment at ch3:3364266..3366972+ (Aspergillus niger KJC3)
ATGGCGTCTGATGGCCCGGATCCCCAGTCATTGAAGTCCTGGCAGGATGC
ATTTCACTATCCAATTCCTACTGTGCGCCGCGTGGAGCAGGAGCTGCGCC
GGGACATCGCAAGCAATAAGGAGAAGCTCAGGGCTCTTGTCGGTACGAGA
TACCGAGAACTTATTGGCACTGCCGAGACGATCGTGTCGATGAACCGCGA
AATGGAGGATGTGGATTCGACGCTGGCCGACATAGGACGAAGATGCAATC
CACGCCTGATGGAGAAGATGTACACACATTACAATCAGATAAAGGATGAT
AGCCATGATGAAGATGCCGCGAAACGAGCGCTCGGAGGGCAACTGGCCTT
GCTTCATCGCTGCGCATCGTCAATCTCCAAGCTTTTGCGACGACGCGGCT
CCGTCTTGCTTGTGGCGAAGCTTATGGTCATCTCTCGCCTTCTACACAAG
ACCCTGTCCCAGCAGACAACGGTACCACCATTTGTGGAGGACCTGCGCAA
TCAATTGGCGTCCCTTCGGCGAAGTCTGTTGAGGAGGCTCGAAAAGCGTC
TCGCGTCTGCTAAGTATGCGGCTGATGAGATTATTGAGGCCTTGGCAGCG
TACTGTCTTACAACTAGCTCTTCCTCAGATGACGCTATTCGTTACTTTCA
CCAGGTTCGCTTAGATGGTATTGGAGGCCAGTTGGAGCTTGTCGACCCGT
CAGGCGAGAATGTCCTGAACAGCTTACGACTATATGTTCGGACCCTCCAA
ACTTCTAAGATCCTGCTATCTCGCCGTTTGTCTGATGTTCTAAGCAAACT
GAAAGCACGGCCCCTGCTGACAGACCCTGAAATTCGGAGTTTGGACGACC
TAGACCTCGGTGTTCTGGGACGCTGGGTTGCCGCAGATGTTAATAACTTC
ACACCATGGATCAAGCTTAGTGAGTTATCGAAGTCGGATGCCGAGAAGAC
GATCAAGCAATGGTCCAAACCGGCTTTTGATAGATTCTTAGACGGGTGCC
GGGGCACCCTCACAAACTGGCTGGACTTCTCGAAACTTCTCTCGTTACGC
AAGCAGACATTGGAGCTCTGGCTATCTTCCCGGAGCTCGACACCCACCCA
TTCATCGTTACAAGTTCTGGAGGGAATTAGGTCGGTCTTTAATGATCGAC
TTAAAGGGATTCTGTCAGAACAAGCTAAAACATTGGATGTATTCGGTCAA
GGCGTCGCTTCTGGAGTGTCGCATTGGGGCGACAGAGCCCACACGGCTTC
GCAGTCACTTTGGGCCGAGGACTTGATTTCCCTTGACTATTCCAACGGCT
CTGCTGCGTTCAAGCAAGCTGTCACGCACAGACTCCTGGGCCGTGATGAT
GACGTATCCGCTGTCCTTGAGAAATACCATGGATGGTTGTCTGTCATCGA
GGAGTCCAGGGAGTCTATCGATGGCCTACGGCAGATACGTTGGGCTGACG
TCTTGGACGAAGGCGAGGACGAGGATCTTGATATCGATGTTCCTGCCATG
TTAAACGACGACGATCCACGACTGCTGCGCGAAGCCCTTCAGGCGGCAAT
TGAGCAAGCATTCGAAACACTCCAAAATTCGCTCAGCACAACCTTCGACA
CACTTGAGAAGCCGGGACAAAGCGGTGAGGCCGCTTTTATGCTGAAGACT
ATCCGACTGGCTCGAAGAGATCTGCCTGCCCAGTTCATTTCGAGCGATTA
TGCACTGTCCCAGAGCATTGTGCCGGAGTTGCAGAAAATTCTTGCTACTG
ACATAGTCGCCCGCACAGGACCCTGGAAGTCTCCGGCTACTTCGAAATCG
AAGTCTGGAAAAGTGCCAGGTCGCACACTTTGGGAAGGTGATCCTGAAAT
CCCTGTCCAGCCGACACCATCGACGTTCAAATACCTGCGTAGACTTGTGC
GTTCTATGGATCAGTACGGCGCCGGGCTTTGGGATGCTTCCACAACCCAA
ACGCTAAAGAGCGCCATGCTCGATGAGATCTCAAAGGCGATCAAATCTTC
CCTTGAGAACCTTAACTCACCTGTCGATCATGAGGACAGCAAAAAGTCTG
CCTCACAGGATGATGAAGAGACGGAATCGGCACGGAACGGCGAGGATAGC
GACCCGGCGAAGCCAGAAACTGAAAGTATCGAATCAGACAGTGCGGCCGA
TGTCAAGGACCGGAAGATACAGCTATACTTCGATTCCGTCTATCTGAATG
ATGCGTTTGCGGTTCAACACTCTGAGCGCAGCCAGTTGACAGAAGTATTG
GGTACACTTCGCAGCAGTCTCGACTTGCCTGCGAAGGCGACAAAGAACCT
AGAGAACGCTGCGCGCGAGTACTGGAAACGGACCCAGCTATTATTTGGGC
TCTTAACCATGGGATCTGAGCTCTAAATGGCGTCTGATGGCCCGGATCCC
CAGTCATTGAAGTCCTGGCAGGATGCATTTCACTATCCAATTCCTACTGT
GCGCCGCGTGGAGCAGGAGCTGCGCCGGGACATCGCAAGCAATAAGGAGA
AGCTCAGGGCTCTTGTCGGTACGAGATACCGAGAACTTATTGGCACTGCC
GAGACGATCGTGTCGATGAACCGCGAAATGGAGGATGTGGATTCGACGCT
GGCCGACATAGGACGAAGATGCAATCCACGCCTGATGGAGAAGATGTACA
CACATTACAATCAGATAAAGGATGATAGCCATGATGAAGATGCCGCGAAA
CGAGCGCTCGGAGGGCAACTGGCCTTGCTTCATCGCTGCGCATCGTCAAT
CTCCAAGCTTTTGCGACGACGCGGCTCCGTCTTGCTTGTGGCGAAGCTTA
TGGTCATCTCTCGCCTTCTACACAAGACCCTGTCCCAGCAGACAACGGTA
CCACCATTTGTGGAGGACCTGCGCAATCAATTGGCGTCCCTTCGGCGAAG
TCTGTTGAGGAGGCTCGAAAAGCGTCTCGCGTCTGCTAAGTATGCGGCTG
ATGAGATTATTGAGGCCTTGGCAGCGTACTGTCTTACAACTAGCTCTTCC
TCAGATGACGCTATTCGTTACTTTCACCAGGTTCGCTTAGATGGTATTGG
AGGCCAGTTGGAGCTTGTCGACCCGTCAGGCGAGAATGTCCTGAACAGCT
TACGACTATATGTTCGGACCCTCCAAACTTCTAAGATCCTGCTATCTCGC
CGTTTGTCTGATGTTCTAAGCAAACTGAAAGCACGGCCCCTGCTGACAGA
CCCTGAAATTCGGAGTTTGGACGACCTAGACCTCGGTGTTCTGGGACGCT
GGGTTGCCGCAGATGTTAATAACTTCACACCATGGATCAAGCTTAGTGAG
TTATCGAAGTCGGATGCCGAGAAGACGATCAAGCAATGGTCCAAACCGGC
TTTTGATAGATTCTTAGACGGGTGCCGGGGCACCCTCACAAACTGGCTGG
ACTTCTCGAAACTTCTCTCGTTACGCAAGCAGACATTGGAGCTCTGGCTA
TCTTCCCGGAGCTCGACACCCACCCATTCATCGTTACAAGTTCTGGAGGG
AATTAGGTCGGTCTTTAATGATCGACTTAAAGGGATTCTGTCAGAACAAG
CTAAAACATTGGATGTATTCGGTCAAGGCGTCGCTTCTGGAGTGTCGCAT
TGGGGCGACAGAGCCCACACGGCTTCGCAGTCACTTTGGGCCGAGGACTT
GATTTCCCTTGACTATTCCAACGGCTCTGCTGCGTTCAAGCAAGCTGTCA
CGCACAGACTCCTGGGCCGTGATGATGACGTATCCGCTGTCCTTGAGAAA
TACCATGGATGGTTGTCTGTCATCGAGGAGTCCAGGGAGTCTATCGATGG
CCTACGGCAGATACGTTGGGCTGACGTCTTGGACGAAGGCGAGGACGAGG
ATCTTGATATCGATGTTCCTGCCATGTTAAACGACGACGATCCACGACTG
CTGCGCGAAGCCCTTCAGGCGGCAATTGAGCAAGCATTCGAAACACTCCA
AAATTCGCTCAGCACAACCTTCGACACACTTGAGAAGCCGGGACAAAGCG
GTGAGGCCGCTTTTATGCTGAAGACTATCCGACTGGCTCGAAGAGATCTG
CCTGCCCAGTTCATTTCGAGCGATTATGCACTGTCCCAGAGCATTGTGCC
GGAGTTGCAGAAAATTCTTGCTACTGACATAGTCGCCCGCACAGGACCCT
GGAAGTCTCCGGCTACTTCGAAATCGAAGTCTGGAAAAGTGCCAGGTCGC
ACACTTTGGGAAGGTGATCCTGAAATCCCTGTCCAGCCGACACCATCGAC
GTTCAAATACCTGCGTAGACTTGTGCGTTCTATGGATCAGTACGGCGCCG
GGCTTTGGGATGCTTCCACAACCCAAACGCTAAAGAGCGCCATGCTCGAT
GAGATCTCAAAGGCGATCAAATCTTCCCTTGAGAACCTTAACTCACCTGT
CGATCATGAGGACAGCAAAAAGTCTGCCTCACAGGATGATGAAGAGACGG
AATCGGCACGGAACGGCGAGGATAGCGACCCGGCGAAGCCAGAAACTGAA
AGTATCGAATCAGACAGTGCGGCCGATGTCAAGGACCGGAAGATACAGCT
ATACTTCGATTCCGTCTATCTGAATGATGCGTTTGCGGTTCAACACTCTG
AGCGCAGCCAGTTGACAGAAGTATTGGGTACACTTCGCAGCAGTCTCGAC
TTGCCTGCGAAGGCGACAAAGAACCTAGAGAACGCTGCGCGCGAGTACTG
GAAACGGACCCAGCTATTATTTGGGCTCTTAACCATGGGATCTGAGCTCT
AAATGGCGTCTGATGGCCCGGATCCCCAGTCATTGAAGTCCTGGCAGGAT
GCATTTCACTATCCAATTCCTACTGTGCGCCGCGTGGAGCAGGAGCTGCG
CCGGGACATCGCAAGCAATAAGGAGAAGCTCAGGGCTCTTGTCGGTACGA
GATACCGAGAACTTATTGGCACTGCCGAGACGATCGTGTCGATGAACCGC
GAAATGGAGGATGTGGATTCGACGCTGGCCGACATAGGACGAAGATGCAA
TCCACGCCTGATGGAGAAGATGTACACACATTACAATCAGATAAAGGATG
ATAGCCATGATGAAGATGCCGCGAAACGAGCGCTCGGAGGGCAACTGGCC
TTGCTTCATCGCTGCGCATCGTCAATCTCCAAGCTTTTGCGACGACGCGG
CTCCGTCTTGCTTGTGGCGAAGCTTATGGTCATCTCTCGCCTTCTACACA
AGACCCTGTCCCAGCAGACAACGGTACCACCATTTGTGGAGGACCTGCGC
AATCAATTGGCGTCCCTTCGGCGAAGTCTGTTGAGGAGGCTCGAAAAGCG
TCTCGCGTCTGCTAAGTATGCGGCTGATGAGATTATTGAGGCCTTGGCAG
CGTACTGTCTTACAACTAGCTCTTCCTCAGATGACGCTATTCGTTACTTT
CACCAGGTTCGCTTAGATGGTATTGGAGGCCAGTTGGAGCTTGTCGACCC
GTCAGGCGAGAATGTCCTGAACAGCTTACGACTATATGTTCGGACCCTCC
AAACTTCTAAGATCCTGCTATCTCGCCGTTTGTCTGATGTTCTAAGCAAA
CTGAAAGCACGGCCCCTGCTGACAGACCCTGAAATTCGGAGTTTGGACGA
CCTAGACCTCGGTGTTCTGGGACGCTGGGTTGCCGCAGATGTTAATAACT
TCACACCATGGATCAAGCTTAGTGAGTTATCGAAGTCGGATGCCGAGAAG
ACGATCAAGCAATGGTCCAAACCGGCTTTTGATAGATTCTTAGACGGGTG
CCGGGGCACCCTCACAAACTGGCTGGACTTCTCGAAACTTCTCTCGTTAC
GCAAGCAGACATTGGAGCTCTGGCTATCTTCCCGGAGCTCGACACCCACC
CATTCATCGTTACAAGTTCTGGAGGGAATTAGGTCGGTCTTTAATGATCG
ACTTAAAGGGATTCTGTCAGAACAAGCTAAAACATTGGATGTATTCGGTC
AAGGCGTCGCTTCTGGAGTGTCGCATTGGGGCGACAGAGCCCACACGGCT
TCGCAGTCACTTTGGGCCGAGGACTTGATTTCCCTTGACTATTCCAACGG
CTCTGCTGCGTTCAAGCAAGCTGTCACGCACAGACTCCTGGGCCGTGATG
ATGACGTATCCGCTGTCCTTGAGAAATACCATGGATGGTTGTCTGTCATC
GAGGAGTCCAGGGAGTCTATCGATGGCCTACGGCAGATACGTTGGGCTGA
CGTCTTGGACGAAGGCGAGGACGAGGATCTTGATATCGATGTTCCTGCCA
TGTTAAACGACGACGATCCACGACTGCTGCGCGAAGCCCTTCAGGCGGCA
ATTGAGCAAGCATTCGAAACACTCCAAAATTCGCTCAGCACAACCTTCGA
CACACTTGAGAAGCCGGGACAAAGCGGTGAGGCCGCTTTTATGCTGAAGA
CTATCCGACTGGCTCGAAGAGATCTGCCTGCCCAGTTCATTTCGAGCGAT
TATGCACTGTCCCAGAGCATTGTGCCGGAGTTGCAGAAAATTCTTGCTAC
TGACATAGTCGCCCGCACAGGACCCTGGAAGTCTCCGGCTACTTCGAAAT
CGAAGTCTGGAAAAGTGCCAGGTCGCACACTTTGGGAAGGTGATCCTGAA
ATCCCTGTCCAGCCGACACCATCGACGTTCAAATACCTGCGTAGACTTGT
GCGTTCTATGGATCAGTACGGCGCCGGGCTTTGGGATGCTTCCACAACCC
AAACGCTAAAGAGCGCCATGCTCGATGAGATCTCAAAGGCGATCAAATCT
TCCCTTGAGAACCTTAACTCACCTGTCGATCATGAGGACAGCAAAAAGTC
TGCCTCACAGGATGATGAAGAGACGGAATCGGCACGGAACGGCGAGGATA
GCGACCCGGCGAAGCCAGAAACTGAAAGTATCGAATCAGACAGTGCGGCC
GATGTCAAGGACCGGAAGATACAGCTATACTTCGATTCCGTCTATCTGAA
TGATGCGTTTGCGGTTCAACACTCTGAGCGCAGCCAGTTGACAGAAGTAT
TGGGTACACTTCGCAGCAGTCTCGACTTGCCTGCGAAGGCGACAAAGAAC
CTAGAGAACGCTGCGCGCGAGTACTGGAAACGGACCCAGCTATTATTTGG
GCTCTTAACCATGGGATCTGAGCTCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003894-T1.utr5p1 | KJC3_003894-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003894-T1.utr3p1 | KJC3_003894-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | PFAM:PF08700 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3364266..3366972 + |
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