You are here

Home

KJC3_003895-T1, KJC3_003895-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003895-T1
Unique NameKJC3_003895-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3367100..3368934+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003895-T1 ID=KJC3_003895-T1|Name=KJC3_003895-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1835bp|location=Sequence derived from alignment at ch3:3367100..3368934+ (Aspergillus niger KJC3)
TGTTGCACCTCTCATCCTTGCTCCTTCTTCCTCCTCTCCCCTTAATCCCT
TGTCAACGCGGCAACCATGGCGGCCCCAAGGCTTCCATTCCTTTACCCAA
ATCTGATGCGCGCAGTTCGATCCTGCGAACCCCATACCTACCGCTCTCTT
CGCCTTTCATCCCGCAACCAGTACGCTCCCTTCCACACCAGTCCACGACG
AAGTCAGGAAACCTACCATCGAAGATACGGGCCTGCCGCAGAAGCGAACC
TACCACCGCCCTCCAAACCTAAAGATGAACCAGCTCGTCAACAGCCCACC
AACTCTTCATCCGGGAAAGACAAGGACAGCAATGCTGCTTCATCTCCGAA
CCCAACCCCACCAGCGCAATCGCAGCCAAAGGACACCGACACCACCTCCG
AGGCCTCATCACAGTCGCAACAAGACAAGTTTGCCTCTGCAGACACAGAA
CTGCTAGACGAGGAGAAATCCGCACAAGAACAAGAGCCCCGTGAAGACTC
CGAGCCCATCCTCGACGCCCGTGATGCCGATGAGGTCAATGCTATATCAA
GCGAAAGACCCCCCGAGGAATCCATCCATCTTCACCATCCACTCAACCAG
AACCCTCTCGAGGGTGTACTTCACATGCCATCTCCTTCATCCTACCTGAC
TACAACCGGCGGTCTCGCCTCCGAAAATAACCACCCGAACCTCGCCCCAG
CCCCTTACGTTCACCACTTTGATACATACTCGCTCGTTCGCGACCTCTCC
ACAGGTGGCTTCTCCGAAGAACAATCCGTCACAATCATGAAGGCAGTCCG
GACCATCCTACACAGTAACCTTGATCTTGCACGCCAAAGCCTGACCTCCA
AATCGGACGTTGAGAACGAGTCCTACCTGTTCAAAGCAGCTTGCTCGGAA
CTCCAATCCTCTTTACAGACGGCCAGAAACTCCGAAATGCAGCGTCAGCG
GACGTCCCGAACACAGCTACAGCACGAGTCTGACATTCTATCTCAACGCT
TGAACCAGGAACTGGCCGGTCTGAAAGACGACATCAAGGGAATGTTCAAC
GATCACAAGATGACGACCCGCGAACAACAGCGAAGCATCGACACCTCTGT
ACAGGAACTAAATTACAAAATCACTGTCTCTCTGAACAGTGACGGCAAGA
GTGAAATTGAGGGTCTGCGCTGGATTCTAACCAGGAGAGCTGCTATGGCC
GTTGCTACTAGTGCCTGTAAGTCACATTCTATACCTTCCTTACACTCCTT
CTCAAGTTTAATACTAATATCGTACAGTCATGATCATCTGCTTCCTGAAA
TACTACTCCGTCCGCAAGGCGCAGGAGAGCGCGGAGAAGAAAAAGAAAGA
GCAAGATCTCCCAGTCAAGGGCGGAACTAAAGAGGCCCGAGCAGCAGCTG
CCGTCGCCGGCCGGGATCCTCTCCAGCCCAAGTCGGCGCCAGTTCCGGGG
GTTCATCTTGGAGAGTCCCTTGGCTGAACTTCCATTACTCTCCTTTCATT
CCCAGTTCAAATGATTTTACCGATTGTACAACAACCAATCCATCTACTTC
CTACTTCTCCTGTATATCATCCATTCTTATACCAGTTATAGATTTTCTCC
TTTTGTTTTCTTAGCCCACATCACATTGATTTATCTCCCTCCTGGTTGGT
GAGACATCTCGATACCCCCACGCATATATCTATCTTTTGACATTCTCTCT
CTTTCTCTCTTTCACATTCAGTTCTCTACTGTTCCCTGGATGGGGACAAT
CGCAACATATAGACGGGTTCCATCGTTCATTATCCTTGTCATATCATGTC
ATGTTAACATTTCAAATCATTGTACCTATACCTAT
back to top

Coding sequence (CDS) from alignment at ch3:3367100..3368934+

>KJC3_003895-T1 ID=KJC3_003895-T1|Name=KJC3_003895-T1|organism=Aspergillus niger KJC3|type=CDS|length=2700bp|location=Sequence derived from alignment at ch3:3367100..3368934+ (Aspergillus niger KJC3)
ATGGCGGCCCCAAGGCTTCCATTCCTTTACCCAAATCTGATGCGCGCAGT
TCGATCCTGCGAACCCCATACCTACCGCTCTCTTCGCCTTTCATCCCGCA
ACCAGTACGCTCCCTTCCACACCAGTCCACGACGAAGTCAGGAAACCTAC
CATCGAAGATACGGGCCTGCCGCAGAAGCGAACCTACCACCGCCCTCCAA
ACCTAAAGATGAACCAGCTCGTCAACAGCCCACCAACTCTTCATCCGGGA
AAGACAAGGACAGCAATGCTGCTTCATCTCCGAACCCAACCCCACCAGCG
CAATCGCAGCCAAAGGACACCGACACCACCTCCGAGGCCTCATCACAGTC
GCAACAAGACAAGTTTGCCTCTGCAGACACAGAACTGCTAGACGAGGAGA
AATCCGCACAAGAACAAGAGCCCCGTGAAGACTCCGAGCCCATCCTCGAC
GCCCGTGATGCCGATGAGGTCAATGCTATATCAAGCGAAAGACCCCCCGA
GGAATCCATCCATCTTCACCATCCACTCAACCAGAACCCTCTCGAGGGTG
TACTTCACATGCCATCTCCTTCATCCTACCTGACTACAACCGGCGGTCTC
GCCTCCGAAAATAACCACCCGAACCTCGCCCCAGCCCCTTACGTTCACCA
CTTTGATACATACTCGCTCGTTCGCGACCTCTCCACAGGTGGCTTCTCCG
AAGAACAATCCGTCACAATCATGAAGGCAGTCCGGACCATCCTACACAGT
AACCTTGATCTTGCACGCCAAAGCCTGACCTCCAAATCGGACGTTGAGAA
CGAGTCCTACCTGTTCAAAGCAGCTTGCTCGGAACTCCAATCCTCTTTAC
AGACGGCCAGAAACTCCGAAATGCAGCGTCAGCGGACGTCCCGAACACAG
CTACAGCACGAGTCTGACATTCTATCTCAACGCTTGAACCAGGAACTGGC
CGGTCTGAAAGACGACATCAAGGGAATGTTCAACGATCACAAGATGACGA
CCCGCGAACAACAGCGAAGCATCGACACCTCTGTACAGGAACTAAATTAC
AAAATCACTGTCTCTCTGAACAGTGACGGCAAGAGTGAAATTGAGGGTCT
GCGCTGGATTCTAACCAGGAGAGCTGCTATGGCCGTTGCTACTAGTGCCT
TCATGATCATCTGCTTCCTGAAATACTACTCCGTCCGCAAGGCGCAGGAG
AGCGCGGAGAAGAAAAAGAAAGAGCAAGATCTCCCAGTCAAGGGCGGAAC
TAAAGAGGCCCGAGCAGCAGCTGCCGTCGCCGGCCGGGATCCTCTCCAGC
CCAAGTCGGCGCCAGTTCCGGGGGTTCATCTTGGAGAGTCCCTTGGCTGA
ATGGCGGCCCCAAGGCTTCCATTCCTTTACCCAAATCTGATGCGCGCAGT
TCGATCCTGCGAACCCCATACCTACCGCTCTCTTCGCCTTTCATCCCGCA
ACCAGTACGCTCCCTTCCACACCAGTCCACGACGAAGTCAGGAAACCTAC
CATCGAAGATACGGGCCTGCCGCAGAAGCGAACCTACCACCGCCCTCCAA
ACCTAAAGATGAACCAGCTCGTCAACAGCCCACCAACTCTTCATCCGGGA
AAGACAAGGACAGCAATGCTGCTTCATCTCCGAACCCAACCCCACCAGCG
CAATCGCAGCCAAAGGACACCGACACCACCTCCGAGGCCTCATCACAGTC
GCAACAAGACAAGTTTGCCTCTGCAGACACAGAACTGCTAGACGAGGAGA
AATCCGCACAAGAACAAGAGCCCCGTGAAGACTCCGAGCCCATCCTCGAC
GCCCGTGATGCCGATGAGGTCAATGCTATATCAAGCGAAAGACCCCCCGA
GGAATCCATCCATCTTCACCATCCACTCAACCAGAACCCTCTCGAGGGTG
TACTTCACATGCCATCTCCTTCATCCTACCTGACTACAACCGGCGGTCTC
GCCTCCGAAAATAACCACCCGAACCTCGCCCCAGCCCCTTACGTTCACCA
CTTTGATACATACTCGCTCGTTCGCGACCTCTCCACAGGTGGCTTCTCCG
AAGAACAATCCGTCACAATCATGAAGGCAGTCCGGACCATCCTACACAGT
AACCTTGATCTTGCACGCCAAAGCCTGACCTCCAAATCGGACGTTGAGAA
CGAGTCCTACCTGTTCAAAGCAGCTTGCTCGGAACTCCAATCCTCTTTAC
AGACGGCCAGAAACTCCGAAATGCAGCGTCAGCGGACGTCCCGAACACAG
CTACAGCACGAGTCTGACATTCTATCTCAACGCTTGAACCAGGAACTGGC
CGGTCTGAAAGACGACATCAAGGGAATGTTCAACGATCACAAGATGACGA
CCCGCGAACAACAGCGAAGCATCGACACCTCTGTACAGGAACTAAATTAC
AAAATCACTGTCTCTCTGAACAGTGACGGCAAGAGTGAAATTGAGGGTCT
GCGCTGGATTCTAACCAGGAGAGCTGCTATGGCCGTTGCTACTAGTGCCT
TCATGATCATCTGCTTCCTGAAATACTACTCCGTCCGCAAGGCGCAGGAG
AGCGCGGAGAAGAAAAAGAAAGAGCAAGATCTCCCAGTCAAGGGCGGAAC
TAAAGAGGCCCGAGCAGCAGCTGCCGTCGCCGGCCGGGATCCTCTCCAGC
CCAAGTCGGCGCCAGTTCCGGGGGTTCATCTTGGAGAGTCCCTTGGCTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003895KJC3_003895Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003895-T1.utr5p1KJC3_003895-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003895-T1.exon1KJC3_003895-T1.exon1Aspergillus niger KJC3exon
KJC3_003895-T1.exon2KJC3_003895-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003895-T1.cdsKJC3_003895-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003895-T1.utr3p1KJC3_003895-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003895-T1KJC3_003895-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR024461
DBxrefPFAM:PF07798
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3367100..3368934 +
Powered by Drupal