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KJC3_003897-T1, KJC3_003897-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003897-T1
Unique NameKJC3_003897-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3376009..3377610+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003897-T1 ID=KJC3_003897-T1|Name=KJC3_003897-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1602bp|location=Sequence derived from alignment at ch3:3376009..3377610+ (Aspergillus niger KJC3)
CATCTATCGAAGCTTTCTGCAATGACGACGATCGTATGCAAACGCCTGGT
GCAGCAGCGGGTTGCCCGCGCGAATTGGGTGGTGGGCGATGGTTGCCGTA
CCCTCACCACCAGCGCTCCGTGGCTTGCAGGACACAATCGATGGTCTCAG
ATCAAACATGACAAGGCCAAAAATGACAAGGCAAAAAGCAAGGAGCGCCA
ACTTATTGGCAAGGAAATCAGCAGTGCAACTCAGAGTATGTACTTGGAAG
GCTTTCGACAATCAATCCCCCGTCATTCTTCGGTATTGATCTCAAGCAGT
GTGGGGTCCCGATCCTAAATTCAATCCGCGCCTTACCCTCGCCCTTTCCA
ATGCAAAGCGAGCAGGAATTCCAAAGACTGTGATCGAAGCAGCAGTTGCT
CGGGGACAGGGCATAAGTGTCACTGGTGAAGCTTTGGAACAGGTCACGGT
CGAAGCTATTCTCCCTCATTCGGTTGCGGCCGTTCTCGAGTGTCTGACCG
ATCAGAAAGCCCGTGTATTGCAAGACGTTCGACACGCTATCAAAGATGCC
GGGGGCATCGTCACACCTACCACATACCTCTTTGAAAAGAAAGGCAGGAT
CATCTTCGAGAAGAAGGATGGGGTGGATCCCGACGACTATATAGACCAGG
CTATCGAAGCAGGTGCGACGGATATCACGGCAGATGAGCAAGGCCGGCTC
CTTGTCTTCACAGAGCCTACGGAAACAAAGAGTGTGGGCGAGACACTTGA
GAAAATGATTGGCCTTTCCATTGAGGAGTTGGATATCATATGGGATCCCA
ACCAAGACACAATAGTCGATCTCAAGGATGAGGCACAGGTTGCGGAAATG
GAGGATATCATCAGTGACCTTCGAGAAGAGCCGAGTCTACGAGATATCTA
CCTGAACACAGTCCAGCGCTTCTGATGATTTTTCATTGATTTTTGGCAGC
TTGATGCCTTCCACGACTACAGCCTGGGGCCTCTCATACTTCCTCATTAC
AGTGTACACTAGACTCGGAACACCTTGGAGTGGCTGGCGGCTCGTCGAGC
CCTTTCTGTATTATATTACTACAAATCACGAAATATCAAAGCGTGTACGC
ATTTCGAATACATACGAGAGGAAGGCATAAGTGAGTTTTCTTCTGATACC
ATTCTCTACTCTTTTCGCAAAGCCTTCATCGTGCTCCGCATTAAATTACC
AATCCCAACACTTCCAGTCGCGTCAAGCCAGTCAAGCATGCGCACCCTAT
ACTCCTGCCACGTCATCTTCATGCCTCCTTCTTTCTCCAGCGCACTCAGT
GCCTTCTGCGTCACTGGCTTCCTCAGCTTGGGCTGTTCATCGCTAATGTT
GTTTTCCTCCTCGAGGTCAGAGAAACAGGCCGCAGACATGTTGCACAATG
CCACGTGGTGGCTTAGAGAGAAAACCGAGGAAATTGTGTAGACAAAAGAG
GAATCGCGCTTTCTTTCCCTCTCATTGAACTCACGAATGAATCGCGTCAG
TGCACCAACGGTGGGGGCCGGTATCAAACAACCCACGGCGTTGGGGTCTT
CCGAGTTGAGTCCTCGGTTCCGCCAGATCAGATTACAGATGTCCATAATA
TA
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Coding sequence (CDS) from alignment at ch3:3376009..3377610+

>KJC3_003897-T1 ID=KJC3_003897-T1|Name=KJC3_003897-T1|organism=Aspergillus niger KJC3|type=CDS|length=1680bp|location=Sequence derived from alignment at ch3:3376009..3377610+ (Aspergillus niger KJC3)
ATGACGACGATCGTATGCAAACGCCTGGTGCAGCAGCGGGTTGCCCGCGC
GAATTGGGTGGTGGGCGATGGTTGCCGTACCCTCACCACCAGCGCTCCGT
GGCTTGCAGGACACAATCGATGGTCTCAGATCAAACATGACAAGGCCAAA
AATGACAAGGCAAAAAGCAAGGAGCGCCAACTTATTGGCAAGGAAATCAG
CAGTGCAACTCAGATGTGGGGTCCCGATCCTAAATTCAATCCGCGCCTTA
CCCTCGCCCTTTCCAATGCAAAGCGAGCAGGAATTCCAAAGACTGTGATC
GAAGCAGCAGTTGCTCGGGGACAGGGCATAAGTGTCACTGGTGAAGCTTT
GGAACAGGTCACGGTCGAAGCTATTCTCCCTCATTCGGTTGCGGCCGTTC
TCGAGTGTCTGACCGATCAGAAAGCCCGTGTATTGCAAGACGTTCGACAC
GCTATCAAAGATGCCGGGGGCATCGTCACACCTACCACATACCTCTTTGA
AAAGAAAGGCAGGATCATCTTCGAGAAGAAGGATGGGGTGGATCCCGACG
ACTATATAGACCAGGCTATCGAAGCAGGTGCGACGGATATCACGGCAGAT
GAGCAAGGCCGGCTCCTTGTCTTCACAGAGCCTACGGAAACAAAGAGTGT
GGGCGAGACACTTGAGAAAATGATTGGCCTTTCCATTGAGGAGTTGGATA
TCATATGGGATCCCAACCAAGACACAATAGTCGATCTCAAGGATGAGGCA
CAGGTTGCGGAAATGGAGGATATCATCAGTGACCTTCGAGAAGAGCCGAG
TCTACGAGATATCTACCTGAACACAGTCCAGCGCTTCTGAATGACGACGA
TCGTATGCAAACGCCTGGTGCAGCAGCGGGTTGCCCGCGCGAATTGGGTG
GTGGGCGATGGTTGCCGTACCCTCACCACCAGCGCTCCGTGGCTTGCAGG
ACACAATCGATGGTCTCAGATCAAACATGACAAGGCCAAAAATGACAAGG
CAAAAAGCAAGGAGCGCCAACTTATTGGCAAGGAAATCAGCAGTGCAACT
CAGATGTGGGGTCCCGATCCTAAATTCAATCCGCGCCTTACCCTCGCCCT
TTCCAATGCAAAGCGAGCAGGAATTCCAAAGACTGTGATCGAAGCAGCAG
TTGCTCGGGGACAGGGCATAAGTGTCACTGGTGAAGCTTTGGAACAGGTC
ACGGTCGAAGCTATTCTCCCTCATTCGGTTGCGGCCGTTCTCGAGTGTCT
GACCGATCAGAAAGCCCGTGTATTGCAAGACGTTCGACACGCTATCAAAG
ATGCCGGGGGCATCGTCACACCTACCACATACCTCTTTGAAAAGAAAGGC
AGGATCATCTTCGAGAAGAAGGATGGGGTGGATCCCGACGACTATATAGA
CCAGGCTATCGAAGCAGGTGCGACGGATATCACGGCAGATGAGCAAGGCC
GGCTCCTTGTCTTCACAGAGCCTACGGAAACAAAGAGTGTGGGCGAGACA
CTTGAGAAAATGATTGGCCTTTCCATTGAGGAGTTGGATATCATATGGGA
TCCCAACCAAGACACAATAGTCGATCTCAAGGATGAGGCACAGGTTGCGG
AAATGGAGGATATCATCAGTGACCTTCGAGAAGAGCCGAGTCTACGAGAT
ATCTACCTGAACACAGTCCAGCGCTTCTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003897KJC3_003897Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003897-T1KJC3_003897-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003897-T1.utr5p1KJC3_003897-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003897-T1.exon1KJC3_003897-T1.exon1Aspergillus niger KJC3exon
KJC3_003897-T1.exon2KJC3_003897-T1.exon2Aspergillus niger KJC3exon
KJC3_003897-T1.exon3KJC3_003897-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003897-T1.cdsKJC3_003897-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003897-T1.utr3p1KJC3_003897-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_003897-T1.utr3p2KJC3_003897-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029072
DBxrefInterPro:IPR017856
DBxrefInterPro:IPR002876
DBxrefInterPro:IPR026564
DBxrefPFAM:PF01709
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3376009..3377610 +
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