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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3382713..3384200+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003900-T1 ID=KJC3_003900-T1|Name=KJC3_003900-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1488bp|location=Sequence derived from alignment at ch3:3382713..3384200+ (Aspergillus niger KJC3)
TTAGGCTCATGAAGGTCGGTTTTTATCCCAATGGCGGACAATCAGCCCTC
TCCCGATTACTCCCGGCCTCAGTTTCCTGCTCATAATGAGCCGCGGGTGT
GGGTTATCACGGCCGGGGATTCCCCCATCGGCATCTCTGTGACGCGCCAG
ATCTTAATGCATGGAGACTATGCCCTGGTTGGACTGGCGCACTCGAGCCT
AGATCGCGATGAATGTCGTCGAGATATGTTCGATGCTTTTCTGGCAGAAA
TTGAAAGCAATGAGGGATGGGGGAAGCGATTCAAGGCACTGCCTCTGGAC
ATAAGGTGTGATTGGGTCTTGTTACTCTCGAATATATGACATAGGCTTAT
AATAATCTCACAGAATGGTCGGCGAATGTCAGGCCATAGTGGCGCAAGCT
GTCGCTTCATTCGGCAGAGTAGACGTTCTTCTTTGCTGTACTAGCCAAGG
TTAGCTTTCAACGGCCTCGATACCCACATCTTGCACATCGCTAAATGGCA
TCGTAGCCCTCATCGGAACAGTGGAAGAGCTCTCAGCCTCGCAGCAGACA
CTAAATCTAGTCCGAGATCAATTCGAGAGTAACTACTTCGGACCACTCAA
TATCATCAAGGCAGCGCTGCCGCACATGCGAAGGCAAAAGGCAGGGCACA
TCACGATCCTCTCCGGCATCAGTAAGCACAGCTCCTTCTTCTCACATACA
TCAGGCAAAATCTAACCAGAGACAGCCGCTCACATAGGTACACCCGGACT
GGGAATGTACTGCGCAGCCGGATGGGCTCTCGAAGGCTTCTGCGATGTGA
GATTCACTACCACATTTCCCACCCTCTATCCCAACTTTATCGCTAACCAA
TCCATTACCAGAGTCTCGCATATGAGATCGCTCCATTCAACATCAAGCTC
ACCATTTTCCAATGCAGCATCGAGATCGGCATTCTCACAAACTTAGTAAC
CAGCGTTCCACCCATAGGTCCCGTATACTCATCCGCTGCTAACCACGCGC
CACTCTTCCGCGGAATCATGAACCGACTCGTGTCACGTCTGTCGAGCAAC
ACGCAATCCTCAGCGGGTTCATCAAATGGGTCGAACCAAGGTAACTCTAT
CGAAGATGGTCCATTCTCGGCCTCAGAGGTCATATCAACGTATCCTCCGC
TAAGTTCGGCGCATATGGAGGTGCTGGTGAGTGAGACTGTCTATGCTATT
ACAGCTATTGCGGGCCATGAGAATCCACCGTCCCGACATATTGTGGGGCA
GGAGGGTGTGGCTAGCGTAAAGGAGAAGCTCAAGACGGTTAGTGAAGAGC
TGGAGGACTTCATTCAGGCAAGCTTTGCTGTGGATTATGCTGCTGATGAG
GCTGGTCGGTCGTCTAAGGAGGAGGGTATGATTATGGGTATGGGTACTGG
TCATGAGGGATTTCAATGATTATTAAGTCTTGATGTGTTTGGATCAATAA
TAGGTAATATTGTGAATGAGTTCGCTCATGCCTATGGT back to topCoding sequence (CDS) from alignment at ch3:3382713..3384200+ >KJC3_003900-T1 ID=KJC3_003900-T1|Name=KJC3_003900-T1|organism=Aspergillus niger KJC3|type=CDS|length=5775bp|location=Sequence derived from alignment at ch3:3382713..3384200+ (Aspergillus niger KJC3)
ATGGCGGACAATCAGCCCTCTCCCGATTACTCCCGGCCTCAGTTTCCTGC
TCATAATGAGCCGCGGGTGTGGGTTATCACGGCCGGGGATTCCCCCATCG
GCATCTCTGTGACGCGCCAGATCTTAATGCATGGAGACTATGCCCTGGTT
GGACTGGCGCACTCGAGCCTAGATCGCGATGAATGTCGTCGAGATATGTT
CGATGCTTTTCTGGCAGAAATTGAAAGCAATGAGGGATGGGGGAAGCGAT
TCAAGGCACTGCCTCTGGACATAAGAATGGTCGGCGAATGTCAGGCCATA
GTGGCGCAAGCTGTCGCTTCATTCGGCAGAGTAGACGTTCTTCTTTGCTG
TACTAGCCAAGCCCTCATCGGAACAGTGGAAGAGCTCTCAGCCTCGCAGC
AGACACTAAATCTAGTCCGAGATCAATTCGAGAGTAACTACTTCGGACCA
CTCAATATCATCAAGGCAGCGCTGCCGCACATGCGAAGGCAAAAGGCAGG
GCACATCACGATCCTCTCCGGCATCACCGCTCACATAGGTACACCCGGAC
TGGGAATGTACTGCGCAGCCGGATGGGCTCTCGAAGGCTTCTGCGATAGT
CTCGCATATGAGATCGCTCCATTCAACATCAAGCTCACCATTTTCCAATG
CAGCATCGAGATCGGCATTCTCACAAACTTAGTAACCAGCGTTCCACCCA
TAGGTCCCGTATACTCATCCGCTGCTAACCACGCGCCACTCTTCCGCGGA
ATCATGAACCGACTCGTGTCACGTCTGTCGAGCAACACGCAATCCTCAGC
GGGTTCATCAAATGGGTCGAACCAAGGTAACTCTATCGAAGATGGTCCAT
TCTCGGCCTCAGAGGTCATATCAACGTATCCTCCGCTAAGTTCGGCGCAT
ATGGAGGTGCTGGTGAGTGAGACTGTCTATGCTATTACAGCTATTGCGGG
CCATGAGAATCCACCGTCCCGACATATTGTGGGGCAGGAGGGTGTGGCTA
GCGTAAAGGAGAAGCTCAAGACGGTTAGTGAAGAGCTGGAGGACTTCATT
CAGGCAAGCTTTGCTGTGGATTATGCTGCTGATGAGGCTGGTCGGTCGTC
TAAGGAGGAGGGTATGATTATGGGTATGGGTACTGGTCATGAGGGATTTC
AATGAATGGCGGACAATCAGCCCTCTCCCGATTACTCCCGGCCTCAGTTT
CCTGCTCATAATGAGCCGCGGGTGTGGGTTATCACGGCCGGGGATTCCCC
CATCGGCATCTCTGTGACGCGCCAGATCTTAATGCATGGAGACTATGCCC
TGGTTGGACTGGCGCACTCGAGCCTAGATCGCGATGAATGTCGTCGAGAT
ATGTTCGATGCTTTTCTGGCAGAAATTGAAAGCAATGAGGGATGGGGGAA
GCGATTCAAGGCACTGCCTCTGGACATAAGAATGGTCGGCGAATGTCAGG
CCATAGTGGCGCAAGCTGTCGCTTCATTCGGCAGAGTAGACGTTCTTCTT
TGCTGTACTAGCCAAGCCCTCATCGGAACAGTGGAAGAGCTCTCAGCCTC
GCAGCAGACACTAAATCTAGTCCGAGATCAATTCGAGAGTAACTACTTCG
GACCACTCAATATCATCAAGGCAGCGCTGCCGCACATGCGAAGGCAAAAG
GCAGGGCACATCACGATCCTCTCCGGCATCACCGCTCACATAGGTACACC
CGGACTGGGAATGTACTGCGCAGCCGGATGGGCTCTCGAAGGCTTCTGCG
ATAGTCTCGCATATGAGATCGCTCCATTCAACATCAAGCTCACCATTTTC
CAATGCAGCATCGAGATCGGCATTCTCACAAACTTAGTAACCAGCGTTCC
ACCCATAGGTCCCGTATACTCATCCGCTGCTAACCACGCGCCACTCTTCC
GCGGAATCATGAACCGACTCGTGTCACGTCTGTCGAGCAACACGCAATCC
TCAGCGGGTTCATCAAATGGGTCGAACCAAGGTAACTCTATCGAAGATGG
TCCATTCTCGGCCTCAGAGGTCATATCAACGTATCCTCCGCTAAGTTCGG
CGCATATGGAGGTGCTGGTGAGTGAGACTGTCTATGCTATTACAGCTATT
GCGGGCCATGAGAATCCACCGTCCCGACATATTGTGGGGCAGGAGGGTGT
GGCTAGCGTAAAGGAGAAGCTCAAGACGGTTAGTGAAGAGCTGGAGGACT
TCATTCAGGCAAGCTTTGCTGTGGATTATGCTGCTGATGAGGCTGGTCGG
TCGTCTAAGGAGGAGGGTATGATTATGGGTATGGGTACTGGTCATGAGGG
ATTTCAATGAATGGCGGACAATCAGCCCTCTCCCGATTACTCCCGGCCTC
AGTTTCCTGCTCATAATGAGCCGCGGGTGTGGGTTATCACGGCCGGGGAT
TCCCCCATCGGCATCTCTGTGACGCGCCAGATCTTAATGCATGGAGACTA
TGCCCTGGTTGGACTGGCGCACTCGAGCCTAGATCGCGATGAATGTCGTC
GAGATATGTTCGATGCTTTTCTGGCAGAAATTGAAAGCAATGAGGGATGG
GGGAAGCGATTCAAGGCACTGCCTCTGGACATAAGAATGGTCGGCGAATG
TCAGGCCATAGTGGCGCAAGCTGTCGCTTCATTCGGCAGAGTAGACGTTC
TTCTTTGCTGTACTAGCCAAGCCCTCATCGGAACAGTGGAAGAGCTCTCA
GCCTCGCAGCAGACACTAAATCTAGTCCGAGATCAATTCGAGAGTAACTA
CTTCGGACCACTCAATATCATCAAGGCAGCGCTGCCGCACATGCGAAGGC
AAAAGGCAGGGCACATCACGATCCTCTCCGGCATCACCGCTCACATAGGT
ACACCCGGACTGGGAATGTACTGCGCAGCCGGATGGGCTCTCGAAGGCTT
CTGCGATAGTCTCGCATATGAGATCGCTCCATTCAACATCAAGCTCACCA
TTTTCCAATGCAGCATCGAGATCGGCATTCTCACAAACTTAGTAACCAGC
GTTCCACCCATAGGTCCCGTATACTCATCCGCTGCTAACCACGCGCCACT
CTTCCGCGGAATCATGAACCGACTCGTGTCACGTCTGTCGAGCAACACGC
AATCCTCAGCGGGTTCATCAAATGGGTCGAACCAAGGTAACTCTATCGAA
GATGGTCCATTCTCGGCCTCAGAGGTCATATCAACGTATCCTCCGCTAAG
TTCGGCGCATATGGAGGTGCTGGTGAGTGAGACTGTCTATGCTATTACAG
CTATTGCGGGCCATGAGAATCCACCGTCCCGACATATTGTGGGGCAGGAG
GGTGTGGCTAGCGTAAAGGAGAAGCTCAAGACGGTTAGTGAAGAGCTGGA
GGACTTCATTCAGGCAAGCTTTGCTGTGGATTATGCTGCTGATGAGGCTG
GTCGGTCGTCTAAGGAGGAGGGTATGATTATGGGTATGGGTACTGGTCAT
GAGGGATTTCAATGAATGGCGGACAATCAGCCCTCTCCCGATTACTCCCG
GCCTCAGTTTCCTGCTCATAATGAGCCGCGGGTGTGGGTTATCACGGCCG
GGGATTCCCCCATCGGCATCTCTGTGACGCGCCAGATCTTAATGCATGGA
GACTATGCCCTGGTTGGACTGGCGCACTCGAGCCTAGATCGCGATGAATG
TCGTCGAGATATGTTCGATGCTTTTCTGGCAGAAATTGAAAGCAATGAGG
GATGGGGGAAGCGATTCAAGGCACTGCCTCTGGACATAAGAATGGTCGGC
GAATGTCAGGCCATAGTGGCGCAAGCTGTCGCTTCATTCGGCAGAGTAGA
CGTTCTTCTTTGCTGTACTAGCCAAGCCCTCATCGGAACAGTGGAAGAGC
TCTCAGCCTCGCAGCAGACACTAAATCTAGTCCGAGATCAATTCGAGAGT
AACTACTTCGGACCACTCAATATCATCAAGGCAGCGCTGCCGCACATGCG
AAGGCAAAAGGCAGGGCACATCACGATCCTCTCCGGCATCACCGCTCACA
TAGGTACACCCGGACTGGGAATGTACTGCGCAGCCGGATGGGCTCTCGAA
GGCTTCTGCGATAGTCTCGCATATGAGATCGCTCCATTCAACATCAAGCT
CACCATTTTCCAATGCAGCATCGAGATCGGCATTCTCACAAACTTAGTAA
CCAGCGTTCCACCCATAGGTCCCGTATACTCATCCGCTGCTAACCACGCG
CCACTCTTCCGCGGAATCATGAACCGACTCGTGTCACGTCTGTCGAGCAA
CACGCAATCCTCAGCGGGTTCATCAAATGGGTCGAACCAAGGTAACTCTA
TCGAAGATGGTCCATTCTCGGCCTCAGAGGTCATATCAACGTATCCTCCG
CTAAGTTCGGCGCATATGGAGGTGCTGGTGAGTGAGACTGTCTATGCTAT
TACAGCTATTGCGGGCCATGAGAATCCACCGTCCCGACATATTGTGGGGC
AGGAGGGTGTGGCTAGCGTAAAGGAGAAGCTCAAGACGGTTAGTGAAGAG
CTGGAGGACTTCATTCAGGCAAGCTTTGCTGTGGATTATGCTGCTGATGA
GGCTGGTCGGTCGTCTAAGGAGGAGGGTATGATTATGGGTATGGGTACTG
GTCATGAGGGATTTCAATGAATGGCGGACAATCAGCCCTCTCCCGATTAC
TCCCGGCCTCAGTTTCCTGCTCATAATGAGCCGCGGGTGTGGGTTATCAC
GGCCGGGGATTCCCCCATCGGCATCTCTGTGACGCGCCAGATCTTAATGC
ATGGAGACTATGCCCTGGTTGGACTGGCGCACTCGAGCCTAGATCGCGAT
GAATGTCGTCGAGATATGTTCGATGCTTTTCTGGCAGAAATTGAAAGCAA
TGAGGGATGGGGGAAGCGATTCAAGGCACTGCCTCTGGACATAAGAATGG
TCGGCGAATGTCAGGCCATAGTGGCGCAAGCTGTCGCTTCATTCGGCAGA
GTAGACGTTCTTCTTTGCTGTACTAGCCAAGCCCTCATCGGAACAGTGGA
AGAGCTCTCAGCCTCGCAGCAGACACTAAATCTAGTCCGAGATCAATTCG
AGAGTAACTACTTCGGACCACTCAATATCATCAAGGCAGCGCTGCCGCAC
ATGCGAAGGCAAAAGGCAGGGCACATCACGATCCTCTCCGGCATCACCGC
TCACATAGGTACACCCGGACTGGGAATGTACTGCGCAGCCGGATGGGCTC
TCGAAGGCTTCTGCGATAGTCTCGCATATGAGATCGCTCCATTCAACATC
AAGCTCACCATTTTCCAATGCAGCATCGAGATCGGCATTCTCACAAACTT
AGTAACCAGCGTTCCACCCATAGGTCCCGTATACTCATCCGCTGCTAACC
ACGCGCCACTCTTCCGCGGAATCATGAACCGACTCGTGTCACGTCTGTCG
AGCAACACGCAATCCTCAGCGGGTTCATCAAATGGGTCGAACCAAGGTAA
CTCTATCGAAGATGGTCCATTCTCGGCCTCAGAGGTCATATCAACGTATC
CTCCGCTAAGTTCGGCGCATATGGAGGTGCTGGTGAGTGAGACTGTCTAT
GCTATTACAGCTATTGCGGGCCATGAGAATCCACCGTCCCGACATATTGT
GGGGCAGGAGGGTGTGGCTAGCGTAAAGGAGAAGCTCAAGACGGTTAGTG
AAGAGCTGGAGGACTTCATTCAGGCAAGCTTTGCTGTGGATTATGCTGCT
GATGAGGCTGGTCGGTCGTCTAAGGAGGAGGGTATGATTATGGGTATGGG
TACTGGTCATGAGGGATTTCAATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003900-T1.utr5p1 | KJC3_003900-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003900-T1.utr3p1 | KJC3_003900-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3382713..3384200 + |
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