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KJC3_003904-T1, KJC3_003904-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003904-T1
Unique NameKJC3_003904-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3389639..3391135+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003904-T1 ID=KJC3_003904-T1|Name=KJC3_003904-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1497bp|location=Sequence derived from alignment at ch3:3389639..3391135+ (Aspergillus niger KJC3)
CGCCAGTCTATAATATATCATAGCAATGACCGATGACAGATGATTCATTT
ATCCCTCTGCTTATCCAGTGAATAGCCTGGGTCGTAGATCGGCGGTGGTT
CAAGCCCATCTGGCTAGCCGCGCAGTAGGTCGAAACCGGCTACCGTAATA
ATCTTCACGCCTTCAATCTCGGGACCTGACTTACGGAGCACTTTTCTCAT
TCTCAGTCAAGACTACAACCACTACGTGGCGCGCCTATCTCTATCAATTG
ACATTGAAAAGTAGAGGAAGAAGAGTAATGGACTAATTACTTTGGATATC
TCCTTAGCAGCCGCCATATCCCCCATCCCCCTTCCCTTTGAACCGCTCCT
GCGGAATCACACGTGCACGAAGAAAACAACTCTCCATCAACACAACGACT
CTCACAGACACCGTCTCCAAGATGACGGAACCACCAGCGAAACGTGCTCG
CCGAGTCGATAGCTCAGCTATGTGGGACCAAGATGACCGGAGGACACGTT
CACCCGAATTAGAACCAGATTATACCAGAAGCCCTCGACGGGACCATGTT
GCGAGAGATGATGGACGACGCGATGGGCCTCGTGATGATCGGAGATACCG
TTCTCGCTCCAGGGACCGGAGAGACAGGAGGCGAGATAGAAGCCGGTCGA
GGGATCGCCGCGACCGCGACCGCAGAGACAGAGACGGACGGGGAATGAGG
GATAGGGAAAGAAGTGTCAGTCGGGATAGGCACTATGATAGACGCGGTAT
GTCGGAGATAAGAATCAAAACTCTTTAAACTACGGATGCTAACAACGCAT
GAAGGCTATCCTTCAAAAGGAGACAGGTACAGGTCGCGATCACCTATTCC
GAACGGCAACAGGGACCGGTCGCGGACGCCGCCACCTCGCGGACCCCGGA
GCGACCGCAGGCACGACCGCAGGGACCATAGAGGACAGACAAACGGTGCT
ACGGATGCGAAGTCAGGAGGGAACCGGTTCAAAGACGAAATGGAGGTGGA
CAGTGACGGAGCTGTTGGAGAAGACGATGTCGAGGAAATGATGCGCCGCA
GCATGGGATTCACGAAATTCAGGAGCACGAAGAATACCAAGGTCCCCGGG
AACGACATTTACGGAGTCCGCAAGGAGAAGAAGACGGAGTACAGACAGTA
CATGAATCGTGTCGGAGGATTCAACAGACCTCTCAGTCCCTCGAGGTAAC
CAAGGCCTTCTGTCTCCCGGCTACCTTCACGATATTATCGGTCGCCTCTT
GCTCACATCCTCAACTTTGCACTTTCGACTTATTCCACACTTCTAAATGT
TCTTTCTCTGTTGGGGCGATATCAGTTTTCATGCATGGCTGGAGTCAAGA
TCTATGGAGGGATTTTTCTTTTGTTGTCGCTCGACTTTTTTCAAGCAAAT
AAGATACCTTTCAAAGCCTGTCTATACCCTTGCATTGGTTCTTAGTAGAT
CGAATCAAGGCAGATGTAATATAATTAAGACTTATCAGGACGCTCGG
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Coding sequence (CDS) from alignment at ch3:3389639..3391135+

>KJC3_003904-T1 ID=KJC3_003904-T1|Name=KJC3_003904-T1|organism=Aspergillus niger KJC3|type=CDS|length=1440bp|location=Sequence derived from alignment at ch3:3389639..3391135+ (Aspergillus niger KJC3)
ATGACGGAACCACCAGCGAAACGTGCTCGCCGAGTCGATAGCTCAGCTAT
GTGGGACCAAGATGACCGGAGGACACGTTCACCCGAATTAGAACCAGATT
ATACCAGAAGCCCTCGACGGGACCATGTTGCGAGAGATGATGGACGACGC
GATGGGCCTCGTGATGATCGGAGATACCGTTCTCGCTCCAGGGACCGGAG
AGACAGGAGGCGAGATAGAAGCCGGTCGAGGGATCGCCGCGACCGCGACC
GCAGAGACAGAGACGGACGGGGAATGAGGGATAGGGAAAGAAGTGTCAGT
CGGGATAGGCACTATGATAGACGCGGCTATCCTTCAAAAGGAGACAGGTA
CAGGTCGCGATCACCTATTCCGAACGGCAACAGGGACCGGTCGCGGACGC
CGCCACCTCGCGGACCCCGGAGCGACCGCAGGCACGACCGCAGGGACCAT
AGAGGACAGACAAACGGTGCTACGGATGCGAAGTCAGGAGGGAACCGGTT
CAAAGACGAAATGGAGGTGGACAGTGACGGAGCTGTTGGAGAAGACGATG
TCGAGGAAATGATGCGCCGCAGCATGGGATTCACGAAATTCAGGAGCACG
AAGAATACCAAGGTCCCCGGGAACGACATTTACGGAGTCCGCAAGGAGAA
GAAGACGGAGTACAGACAGTACATGAATCGTGTCGGAGGATTCAACAGAC
CTCTCAGTCCCTCGAGGTAAATGACGGAACCACCAGCGAAACGTGCTCGC
CGAGTCGATAGCTCAGCTATGTGGGACCAAGATGACCGGAGGACACGTTC
ACCCGAATTAGAACCAGATTATACCAGAAGCCCTCGACGGGACCATGTTG
CGAGAGATGATGGACGACGCGATGGGCCTCGTGATGATCGGAGATACCGT
TCTCGCTCCAGGGACCGGAGAGACAGGAGGCGAGATAGAAGCCGGTCGAG
GGATCGCCGCGACCGCGACCGCAGAGACAGAGACGGACGGGGAATGAGGG
ATAGGGAAAGAAGTGTCAGTCGGGATAGGCACTATGATAGACGCGGCTAT
CCTTCAAAAGGAGACAGGTACAGGTCGCGATCACCTATTCCGAACGGCAA
CAGGGACCGGTCGCGGACGCCGCCACCTCGCGGACCCCGGAGCGACCGCA
GGCACGACCGCAGGGACCATAGAGGACAGACAAACGGTGCTACGGATGCG
AAGTCAGGAGGGAACCGGTTCAAAGACGAAATGGAGGTGGACAGTGACGG
AGCTGTTGGAGAAGACGATGTCGAGGAAATGATGCGCCGCAGCATGGGAT
TCACGAAATTCAGGAGCACGAAGAATACCAAGGTCCCCGGGAACGACATT
TACGGAGTCCGCAAGGAGAAGAAGACGGAGTACAGACAGTACATGAATCG
TGTCGGAGGATTCAACAGACCTCTCAGTCCCTCGAGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008380RNA splicing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003904KJC3_003904Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003904-T1.utr5p1KJC3_003904-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003904-T1.exon1KJC3_003904-T1.exon1Aspergillus niger KJC3exon
KJC3_003904-T1.exon2KJC3_003904-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003904-T1.cdsKJC3_003904-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003904-T1.utr3p1KJC3_003904-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003904-T1KJC3_003904-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013957
DBxrefPFAM:PF08648
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3389639..3391135 +
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