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KJC3_003909-T1, KJC3_003909-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003909-T1
Unique NameKJC3_003909-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3399519..3403421-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003909-T1 ID=KJC3_003909-T1|Name=KJC3_003909-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3903bp|location=Sequence derived from alignment at ch3:3399519..3403421- (Aspergillus niger KJC3)
AAATGATGACCAAACTGGGCAGCAAATCCCGTGCTTGATGCCCATCCCAT
CTTTTTTTCCCACACACAAACATGTCTTTCCCTTCTTCTCCTGTTCGGTC
CCAGCCAGCTCTTTAGTGTTTGCAACCACCTTCTTCCATCTTGTTCAACT
ACTGCTGCTGCTGCGCTGCTGCTAATCCTCTCTTATCTATCTCGGGTCAT
AAAATCATGACGCACTTCCCCCCAAAGCCTCGTTCTGATTGCCTCACCTC
CTGTATATCTGTACTACAAACCACTACTAGAATAGACACTGCTGCTTCCT
GTCTCCTTCAGTCTCGCCCAACCCTTCTCCCCTCCTGTGTTCGTCTATCG
GCTCCACTGCCTCCATGACTATTGCCTGGTCCGCAACCATCGGCCGTACC
TGAAAGGTGCACCCTCCCTCCGGATCTCCGCCACCGAACTTCCTGATTGA
TAAAACTATTCCCTCTGGCTAGATGCTGATCCATGGACTAGTTATTCTTA
ATTCTTTGCCCTTAACCACCTCTCCCTCACCGCCCTTAACCTCTCTTTTC
ACTTCGATTGCCTCCCCAGAGGAATGAATACAATAGAGAGATCGGAACAG
TGACACTACCCGGGGTATACTGCGGCCATACCGTTTCGGCCTCGCTTCGC
CGCAAGGCCTTCCTTGCCACCCAACACGTCTGGCTATTTGCGTCGATCAA
CTGGGAAATCTCAAGGCTATTCATTCACTCCTTACACTGCGGCGGCTTGC
GTCCACCATGACAGAGTTGGACTCGCTTCCAGAAGATGAGCGCTCGGTGG
AGTTATCATCCATTGCTGCCATCTACCCCGAGATCAAGATAGATCCGTCC
TCGCCATTCAAAGCATCCCTCACCCTACCGGTTAAGCCATCTGCTCCCCT
GCGTGTCTGCTTCCAGCAACAATCCGAGACAGAGTTCCCCGCCGTACTAA
CTCCTCCCACGTCGGTTGATGCCAACGATCCTGGCTTTCCTTTCAAGACA
GGTGACCATAACTCCGCTAGCCTCAATCGCGATAGTCATACACTCTCACA
TCTTCCTCCCATCTGCCTCGAAATCGAGCTGCCCCAAGGTTACCCTTCCG
AAGAACCGCCCATTTTCAGGCTTGAAACAAACCCTCCGTGGTTGCCACCT
TCTATATTGTCAGGTCTTTTGGATGACGGAAAACGTCTTTGGGAGGAATG
TGGCAAGGACCTCGTGGTATACACATATATTGACCATCTTCAGCAACTTG
GGGAGTCAGCTTTTGGGGTTGGCGACATATCCGGTGGCGAAGTTCAACTT
CCCCGTGAGTTAAAGATCGCATTGCTAGACTTCAACAACAAAGCCGAACG
GGAAAGGTTCGAGGAGGAGACCTTTGAGTGTGGAGTCTGTCTCGAACCCA
AGAAGGGCACGATTTGCCACCGACTCGTACTTTGTGGGCATGTCTTCTGC
GTGCCTTGTCTCCAAGACTTCTACAACTCTTGTATAACGGAAGGCGACGT
CGAAGGTGTCAAGTGTTTGGCTCCTGGTTGTGGTAAAGAATCAAACAGTA
CCTCTCCCACCGACGCCCGTCCGAAGAAACACAAAAAGCAAGATCGAACC
CTGAGCCCCAGCGAGCTTCTTCAGATCCCGTTAGAACAAGAGACAGTGCA
GCGTTACGTTTTCCTGAAACGGAAGAAGAAGCTCGAGGCGGACAAGTCGA
CTGTGTATTGCCCACGGCAGTGGTGTCAAGGAGCCGCACGATCCAAGAGA
CACCCCAAGCCTGTTGATCCAATGACAGATGACCTCGATGACGAAGATGA
CGAAGATGAAGAGGGACCCGTGTTCGATCCCTTAGGGGAGGAGGCTCAGC
TACCACCAATGTCCGAGCGCGTCGCCATCTGCGAAGATTGCAACTATGCC
TTCTGTTGTGTTTGCAAGAAGGGCTGGCATGGCGAACTCGTACGGTGCTT
CCCTCGCCGCGAAGCAGAGCTCTCGGCCGAGGAGAAAGCAACGGAGGAGT
ATCTGCGTATGTACACCTCGGCATGTCCGACATGCGATGCTCCATGCCAG
AAGCAAATGGGTTGCAATCATATGATATGTTTCAAATGCGACACCCACTT
CTGCTATCTCTGCTCTAGTTGGCTCTGCGAAGACAACCCTTACCGCCATT
TCAACGACATCAACAGTGGATGTTTCAATCGACTGTGGGATCTGGAAGGT
GGCGATGGGATCAATCCCGATGGAGCCGCAGCCTTGCATCGTGTACCCGA
CGAACTGCTGGACTTCGACGATGGCAGCGATGACGAGGACCTCGTTGCTT
GGGAACTCGGCAGACGACCTCCACCTCCTGCTCCGGTCCCTCCAAGAGTC
AACAACGGCGCAGCTGGAGGTAATCGCCATCGTGGGAACAACGCCAATGA
TCTCGACGCCGCAGGTCGAGCAGCCGCAGCTGAAAGACAAGCTCAAGCAC
GAGCAATGGCCGAGGTCCGCCGTCGTCCAGATGGCGAGCCTCCCCAAGTC
AGACGCCCGGGACTCCAGAGGTTTCTGGACCTGGTCCTGAATGACCGGGA
AGACGAATGGGACAGTGACGAGCTAGATGATGATTTCTAGCAATGGCCCC
ATCACTTCCACGGATCTAAATATATTGGAACCTCCTACCATACCTCACCC
CCCTTTTTGGTATCTATACTTGTTTCTTCATGGATATACCGTATCACGAC
ACGACTCATGTACGTTTTGCGAAGCTTGCCATTCATCTCTAACTATGACC
TTGACGACTATGACTATGCATGCATCTTGCATTAGCGAAAATGTTCATTG
GTTTTGGACATATTCCTTTTATTTTCTCTTTGCATCACACTGCATCCAAC
ATCCAAAATTCAATTTAAGCCGTGTTGATCTTCTTTGGCATGTATATCAT
GATATGTTTTTCTGTTTCAAAAAGAAAGCAACGTCTATTTAATACTCGCT
TTTCCATTTTCTTCCCGATCGAAATCTTGCATTTCGATTACAAAATAGGG
TAAAGTAAACCATACATCCGTATAAACAACACATATCGGAGTCAAAAGTA
TGTCCATTGAGACCACGGAAATAGAAAAGGTGAGGGGCCTCAGATCCCGA
AATAAGAGAAACTAAATAACAGAGAGAAATAAGAGCGATCGAGTAACCCA
GTCTTAGAAAGAGACCCTAGCACCTTGGAACGAACTTCTTGGTTTGGAAT
CCATGGTCATAGCGCTGTGCTTAAAAAGTTTCAGTGACAACAACAATACG
CTCCAAAAACGCCCTTTTTCATATATGCAATGCGAGGAAGAGGCGATCAA
TGACTCGCACCCTCACGCTCACGCCCCAGTACTTTTCATCACCACTATCC
TAAATCTATCATAATTTTGCTTTTTGTGGCACAAAGGGGAAGAGCCTATA
CAAGGAGGATATCATCTTCCTCGTCGAGATCCTGGCCATTCGGACCGGCA
TCCGTAGTATTCCACTTGTACCAGAACTCATAACTCATGATGGTATGGTC
CGCGTACATGAGCATTAGCCGGTAATGGCGCGATGGGTTCCAGCCGCGCC
AGCTTTCCTCGGGCTGGTAGGCACTGCTTGCGCGGGCGTGGCATTCTGGC
AAGCTGAGCGGGGGTGGTTGGGGGCTGTCGTCATCGGCAGTTTCACTGGG
ATCGACTTCCGAATCGTTGATCTCTTCATTGAAGGAACTCTGTTGTAGCA
TGACGCTGCTTGATAGAGAGGAGCTGGGTTCGTCATGACTCAGGTACTTG
AATTGGAAGGCGAGGTCCTCGGGCTTGACGTCGCGGGGGATATAAGGTAC
GTCCGGCGGGATCTCGAAACCTTGGATGGGACTGACGCTCATTCCCAAGA
TGGGGACGAGAGGACGGTCGCCGTATTTTTCTTGACTCTCGAACGGTACA
ATC
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Coding sequence (CDS) from alignment at ch3:3399519..3403421-

>KJC3_003909-T1 ID=KJC3_003909-T1|Name=KJC3_003909-T1|organism=Aspergillus niger KJC3|type=CDS|length=1833bp|location=Sequence derived from alignment at ch3:3399519..3403421- (Aspergillus niger KJC3)
ATGACAGAGTTGGACTCGCTTCCAGAAGATGAGCGCTCGGTGGAGTTATC
ATCCATTGCTGCCATCTACCCCGAGATCAAGATAGATCCGTCCTCGCCAT
TCAAAGCATCCCTCACCCTACCGGTTAAGCCATCTGCTCCCCTGCGTGTC
TGCTTCCAGCAACAATCCGAGACAGAGTTCCCCGCCGTACTAACTCCTCC
CACGTCGGTTGATGCCAACGATCCTGGCTTTCCTTTCAAGACAGGTGACC
ATAACTCCGCTAGCCTCAATCGCGATAGTCATACACTCTCACATCTTCCT
CCCATCTGCCTCGAAATCGAGCTGCCCCAAGGTTACCCTTCCGAAGAACC
GCCCATTTTCAGGCTTGAAACAAACCCTCCGTGGTTGCCACCTTCTATAT
TGTCAGGTCTTTTGGATGACGGAAAACGTCTTTGGGAGGAATGTGGCAAG
GACCTCGTGGTATACACATATATTGACCATCTTCAGCAACTTGGGGAGTC
AGCTTTTGGGGTTGGCGACATATCCGGTGGCGAAGTTCAACTTCCCCGTG
AGTTAAAGATCGCATTGCTAGACTTCAACAACAAAGCCGAACGGGAAAGG
TTCGAGGAGGAGACCTTTGAGTGTGGAGTCTGTCTCGAACCCAAGAAGGG
CACGATTTGCCACCGACTCGTACTTTGTGGGCATGTCTTCTGCGTGCCTT
GTCTCCAAGACTTCTACAACTCTTGTATAACGGAAGGCGACGTCGAAGGT
GTCAAGTGTTTGGCTCCTGGTTGTGGTAAAGAATCAAACAGTACCTCTCC
CACCGACGCCCGTCCGAAGAAACACAAAAAGCAAGATCGAACCCTGAGCC
CCAGCGAGCTTCTTCAGATCCCGTTAGAACAAGAGACAGTGCAGCGTTAC
GTTTTCCTGAAACGGAAGAAGAAGCTCGAGGCGGACAAGTCGACTGTGTA
TTGCCCACGGCAGTGGTGTCAAGGAGCCGCACGATCCAAGAGACACCCCA
AGCCTGTTGATCCAATGACAGATGACCTCGATGACGAAGATGACGAAGAT
GAAGAGGGACCCGTGTTCGATCCCTTAGGGGAGGAGGCTCAGCTACCACC
AATGTCCGAGCGCGTCGCCATCTGCGAAGATTGCAACTATGCCTTCTGTT
GTGTTTGCAAGAAGGGCTGGCATGGCGAACTCGTACGGTGCTTCCCTCGC
CGCGAAGCAGAGCTCTCGGCCGAGGAGAAAGCAACGGAGGAGTATCTGCG
TATGTACACCTCGGCATGTCCGACATGCGATGCTCCATGCCAGAAGCAAA
TGGGTTGCAATCATATGATATGTTTCAAATGCGACACCCACTTCTGCTAT
CTCTGCTCTAGTTGGCTCTGCGAAGACAACCCTTACCGCCATTTCAACGA
CATCAACAGTGGATGTTTCAATCGACTGTGGGATCTGGAAGGTGGCGATG
GGATCAATCCCGATGGAGCCGCAGCCTTGCATCGTGTACCCGACGAACTG
CTGGACTTCGACGATGGCAGCGATGACGAGGACCTCGTTGCTTGGGAACT
CGGCAGACGACCTCCACCTCCTGCTCCGGTCCCTCCAAGAGTCAACAACG
GCGCAGCTGGAGGTAATCGCCATCGTGGGAACAACGCCAATGATCTCGAC
GCCGCAGGTCGAGCAGCCGCAGCTGAAAGACAAGCTCAAGCACGAGCAAT
GGCCGAGGTCCGCCGTCGTCCAGATGGCGAGCCTCCCCAAGTCAGACGCC
CGGGACTCCAGAGGTTTCTGGACCTGGTCCTGAATGACCGGGAAGACGAA
TGGGACAGTGACGAGCTAGATGATGATTTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003909KJC3_003909Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003909-T1KJC3_003909-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003909-T1.cdsKJC3_003909-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003909-T1.utr3p2KJC3_003909-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_003909-T1.utr3p1KJC3_003909-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003909-T1.exon3KJC3_003909-T1.exon3Aspergillus niger KJC3exon
KJC3_003909-T1.exon2KJC3_003909-T1.exon2Aspergillus niger KJC3exon
KJC3_003909-T1.exon1KJC3_003909-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003909-T1.utr5p2KJC3_003909-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_003909-T1.utr5p1KJC3_003909-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR016135
DBxrefInterPro:IPR001841
DBxrefInterPro:IPR017907
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR002867
DBxrefInterPro:IPR006575
DBxrefPFAM:PF05773
DBxrefPFAM:PF01485
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3399519..3403421 -
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