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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3403706..3405211+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003910-T1 ID=KJC3_003910-T1|Name=KJC3_003910-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1506bp|location=Sequence derived from alignment at ch3:3403706..3405211+ (Aspergillus niger KJC3)
GTCTGCCATCCTAATTTTAGAAAGAATTTCAACCCGATCAACCTGCAGGA
CCATCCTAGAATCTTAACATCTGTCTACCCCGAATAGATCTCACACCCGT
TATGTCTGTGTGCCAGTCTTGATCAGGTTTCTGATTCGGTTTAGCCCGTT
CTGCCAGCTGGTATTGTAATTCTGGGTAGCTTCTGGTTCCTTGTCCACCC
ACCATCTGCTAGCTCCCAGCAAGACTATATAAAGAGAAACATCACTCAAT
CATTGTTTTTGAACTTGAACCCCGAGTTCCACAAAATGGCTGATATACCA
TTGGCATCCTTGTCTTTGACTCATGTCCACTACGTAAGTCTTTGCCAATG
CTCCTGAATAGTCAAAGTAGCCCGGATCTCAACGCCGGACCGTCGCTGAC
CAAGACTATCAAACGGAAATAGGACCCCAATGATCCAATTTCCTTTCTTT
CTGCCTGGCTTGCCTTAGTGCCACAAGCGCTATGCGTGAGCTATGCTACC
CTGATCTGGGCTTCAAGAGAAGCTGAGGTAGTCTTGATGTTTGCGGGTCA
GATGGGTTGCGAAGCACTGAATTTTGTGCTCAAGCGCATCGTCAAAGAGG
AGAGGCCAAAACGTAGGTATTTCTTTGCAGATGTTTTGCTTTCCTTCGAC
ATGAAATGGATGGAGCTAACGACTCTCTAAAGAAATGCTGGGTAAAGGCT
ATGGCATGCCATCTTCTCATGCCCAGTTCATGGCCTATCTCGCCGTCTAT
GCATCACTCTTCCTCATCTACCGACACAGCCCGAGCTTATCGCAATCAGG
AGCAACCCTTCACTTCTGGACGCGAGTATTGATTTCCTTGGTGCTGTGTC
TCGGTGCTGGTGCAGTAGCCGTTAGCCGCATTTACCTGAATTACCACACC
CCCAAGCAGGTCCTGGCCGGGTGTGGCGCAGGTATGATCTGTGCGTTCGC
TTGGTTCTTCATCACCGGGCTACTCAGGTCGCAGGGATGGATTGATTGGG
TTTTGAACCTGGAGGTTGTTCAATTCTTTCGTGTGAGAGATTTGGTTGTG
AACGAAGATCTCGCCGAGGCCGGATGGCAACGCTGGGAGGCCAAGCAAAA
ACTGAAGCGGAAGGGGGCCGGAGGTCAGGCATCGTCGAAAACCGAATAGT
GCGATTCGATGACATTGAAGCGCAAGCTCGTATACCCGCCGTCCTCTGTG
ATACCCATAGATTTCACTGCCTATGATTGATAAATGCATGCAAGGCCTGG
GAAGTGAAAGTCCCTCGGCTTGGTTCGATCCTGGCTGGAGTTACAGATTT
GCCTACTATGATAGGCTTCATTTATCTACGAGTATGGGGTAAACTTGGCG
ATTAGTCCTTCCTTAATTGCTTTGTTGAAGATGAAGGGTTTTAGTAATAT
AAATGTTGGTGGTACCGATTGGAACATGCAGCTTCGCCTGAGGATATATA
TTGCAACAAGACGGGGACTAGAACTGCCAGCAGTACTAGTACTGTCGGAG
TAGTAG back to topCoding sequence (CDS) from alignment at ch3:3403706..3405211+ >KJC3_003910-T1 ID=KJC3_003910-T1|Name=KJC3_003910-T1|organism=Aspergillus niger KJC3|type=CDS|length=2115bp|location=Sequence derived from alignment at ch3:3403706..3405211+ (Aspergillus niger KJC3)
ATGGCTGATATACCATTGGCATCCTTGTCTTTGACTCATGTCCACTACGA
CCCCAATGATCCAATTTCCTTTCTTTCTGCCTGGCTTGCCTTAGTGCCAC
AAGCGCTATGCGTGAGCTATGCTACCCTGATCTGGGCTTCAAGAGAAGCT
GAGGTAGTCTTGATGTTTGCGGGTCAGATGGGTTGCGAAGCACTGAATTT
TGTGCTCAAGCGCATCGTCAAAGAGGAGAGGCCAAAACAAATGCTGGGTA
AAGGCTATGGCATGCCATCTTCTCATGCCCAGTTCATGGCCTATCTCGCC
GTCTATGCATCACTCTTCCTCATCTACCGACACAGCCCGAGCTTATCGCA
ATCAGGAGCAACCCTTCACTTCTGGACGCGAGTATTGATTTCCTTGGTGC
TGTGTCTCGGTGCTGGTGCAGTAGCCGTTAGCCGCATTTACCTGAATTAC
CACACCCCCAAGCAGGTCCTGGCCGGGTGTGGCGCAGGTATGATCTGTGC
GTTCGCTTGGTTCTTCATCACCGGGCTACTCAGGTCGCAGGGATGGATTG
ATTGGGTTTTGAACCTGGAGGTTGTTCAATTCTTTCGTGTGAGAGATTTG
GTTGTGAACGAAGATCTCGCCGAGGCCGGATGGCAACGCTGGGAGGCCAA
GCAAAAACTGAAGCGGAAGGGGGCCGGAGGTCAGGCATCGTCGAAAACCG
AATAGATGGCTGATATACCATTGGCATCCTTGTCTTTGACTCATGTCCAC
TACGACCCCAATGATCCAATTTCCTTTCTTTCTGCCTGGCTTGCCTTAGT
GCCACAAGCGCTATGCGTGAGCTATGCTACCCTGATCTGGGCTTCAAGAG
AAGCTGAGGTAGTCTTGATGTTTGCGGGTCAGATGGGTTGCGAAGCACTG
AATTTTGTGCTCAAGCGCATCGTCAAAGAGGAGAGGCCAAAACAAATGCT
GGGTAAAGGCTATGGCATGCCATCTTCTCATGCCCAGTTCATGGCCTATC
TCGCCGTCTATGCATCACTCTTCCTCATCTACCGACACAGCCCGAGCTTA
TCGCAATCAGGAGCAACCCTTCACTTCTGGACGCGAGTATTGATTTCCTT
GGTGCTGTGTCTCGGTGCTGGTGCAGTAGCCGTTAGCCGCATTTACCTGA
ATTACCACACCCCCAAGCAGGTCCTGGCCGGGTGTGGCGCAGGTATGATC
TGTGCGTTCGCTTGGTTCTTCATCACCGGGCTACTCAGGTCGCAGGGATG
GATTGATTGGGTTTTGAACCTGGAGGTTGTTCAATTCTTTCGTGTGAGAG
ATTTGGTTGTGAACGAAGATCTCGCCGAGGCCGGATGGCAACGCTGGGAG
GCCAAGCAAAAACTGAAGCGGAAGGGGGCCGGAGGTCAGGCATCGTCGAA
AACCGAATAGATGGCTGATATACCATTGGCATCCTTGTCTTTGACTCATG
TCCACTACGACCCCAATGATCCAATTTCCTTTCTTTCTGCCTGGCTTGCC
TTAGTGCCACAAGCGCTATGCGTGAGCTATGCTACCCTGATCTGGGCTTC
AAGAGAAGCTGAGGTAGTCTTGATGTTTGCGGGTCAGATGGGTTGCGAAG
CACTGAATTTTGTGCTCAAGCGCATCGTCAAAGAGGAGAGGCCAAAACAA
ATGCTGGGTAAAGGCTATGGCATGCCATCTTCTCATGCCCAGTTCATGGC
CTATCTCGCCGTCTATGCATCACTCTTCCTCATCTACCGACACAGCCCGA
GCTTATCGCAATCAGGAGCAACCCTTCACTTCTGGACGCGAGTATTGATT
TCCTTGGTGCTGTGTCTCGGTGCTGGTGCAGTAGCCGTTAGCCGCATTTA
CCTGAATTACCACACCCCCAAGCAGGTCCTGGCCGGGTGTGGCGCAGGTA
TGATCTGTGCGTTCGCTTGGTTCTTCATCACCGGGCTACTCAGGTCGCAG
GGATGGATTGATTGGGTTTTGAACCTGGAGGTTGTTCAATTCTTTCGTGT
GAGAGATTTGGTTGTGAACGAAGATCTCGCCGAGGCCGGATGGCAACGCT
GGGAGGCCAAGCAAAAACTGAAGCGGAAGGGGGCCGGAGGTCAGGCATCG
TCGAAAACCGAATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003910-T1.utr5p1 | KJC3_003910-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003910-T1.utr3p1 | KJC3_003910-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036938 |
| DBxref | InterPro:IPR039667 |
| DBxref | InterPro:IPR000326 |
| DBxref | PFAM:PF01569 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3403706..3405211 + |
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