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KJC3_003914-T1, KJC3_003914-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003914-T1
Unique NameKJC3_003914-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3413257..3415970+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003914-T1 ID=KJC3_003914-T1|Name=KJC3_003914-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2714bp|location=Sequence derived from alignment at ch3:3413257..3415970+ (Aspergillus niger KJC3)
CTTTCCATTCCACTCATTCCACTCCATTTCTCTCGGTTCGATGCGTAATG
GTCAGACATCTTTTCGGAGGCTTGATTGCTGCCCATCATGCGGTTCCCCA
CTTCTGCATCTTTTCCTTTTCTTGTCTCCTTCCCCCGGCTGGCCCTCGCG
TGGTCGGCTTCCTTGACTGGTTCCACGGCCCGATACTAACGAGTCAAACC
CGGTCCTCATGATGGGTCCTTCTCTTTTTTTCTGAATTTTTCCTTTTTTA
TCCTCTCCTCTTACGCCGATGACGCTTTTGGGGAATGATGAGGTAGTACT
CAGTCTCAGTCGTAGTTGTAGCTGGACGAGGAGGAGGCCCATGGGCCGAT
ATGTGTGCCCTTTAAATACCACCCCCCTTCTGGCATTCCCCAGATACTTC
TACCTCTTTTCTCTTCTTCTTTCTGCGTGTGTCTCTATCCCCACCTTATC
TCTCTTCCTATACAGAAGATCCTTACCCCGGTCGTGGGAGGCATCTTCTC
TGTCTCTCTATATCTCACCCTCTCTCATACCCGCAAAGAGAGTGAACAAA
ACCTATACTCCTTCTCCCCCCCTCCCACCGATTGTACCTCCCTTGTACAT
ATCATAAAAGTCTCCCTTTAATATCACAAGCGGCTGTCACACCGCACTTT
CCATTTCCAATCATGGGTGTCGTACACGACCTGGACACCTCCCATGATGA
CCACAAGGAGGGAACCGCCTTGGAGATGGACGATGTCCTCAAGGACCCCA
AGGCCATCGAGGAATTCAACGAAGCTGCCATGGATGCAGAGTTGTTGCAA
CTCGAAGAGCAGCTGCAGGAGAGGAAGCCCGGTTGGTTCGTGGGCTTCTC
CAATCCATCTGTGTATACCTACGTCCTAGTGGCCTTTGCCTCCATGGGTG
GTCTGCTCTCCGGTCTGGATCAGTCCCTCATCAGTGGTGCCAACATCTAC
CTGCCCGATGCATTGAACCTTACCGACAACCAAAGTAGTCTTGTGGATGC
TGGTATGCCTCTGGGTGCCGTGGCCGGTGCCCTGATCCTCTCCCCCGCCA
ACGAGTACCTCGGTCGTCGCATGGCCATCATCGTCTCCTGCATCCTGTAT
ACTATCGGTGCCGCCTTGGAGGCCGGTGCCATCAGCTTCGGTATGATCTT
TGCTGGACGTTTCGTGCTTGGTATGGGTGTGGGTCTGGAAGGTGGTACAG
TCCCTGTGTATGTCGCCGAGTCTGGTATGTACTTTTACCCCTTACTTCCT
TTTACATCATCATCAACGTCCAATGTATCGACTAACGTCACTTCAGTGCC
CCGCAAGATGCGTGGTAACCTCGTCTCACTATACCAGTTGAACATCGCTC
TCGGTGAAGTCCTGGGCTATGCCGTGGCCGCCATCTTCCTCGATGTCAAG
GGTAACTGGCGTTACATCCTGGGATCTTCCCTGGTGTTCTCGACCATTCT
GCTAGTGGGTATGCTTTTCCTGCCGGAGAGTCCGCGTTACCTCATGCACA
AGGGCCGGGCCGTGGAAGCCTACGGCGTATGGAAGCGAATCCGCGGCTTC
AACGACTATGACGCCAAGGACGAGTTCCTGGGCATGCGCCAGGCGGTGGA
TGCCGAGCGCGAAGAACAAGCCGCTACCAAGAAGTACGCCTGGATGGACT
TCATCACAGTGCCGCGCGCCCGTCGCGCCATGGTCTACGCCAACATCATG
GTCTTCCTGGGCCAATTCACCGGTGTCAACGCCATCATGTACTACATGAG
CACACTGATGGATGCCATCGGCTTCGACGAGCGTGACAGCGTCTTCATGT
CTTTGGTTGGTGGTGGCTCCCTCCTGATCGGCACCATCCCGGCGGTGCTG
TACATGGAACGGTTCGGCCGCCGCTACTGGGCCAATGCGATGCTCCCCGG
GTTTTTCATCGGCTTAGTGCTGGTGGGCATCGGCTACCAGATCAACTACC
AGACCCACCCCAAAGCCGCCCAGGGCGTCTACCTCACCGGCATCATCCTC
TACCAGGCCTTCTTCGGCTCCTACGCGTGTCTCACCTGGGTCGTGCCCGC
CGAAGTCTTCCCCACTTATTTGCGCAGTTACGGCATGACCACCGCCGACG
CCAACCTCTTCCTCTGCTCCTTCATCGTCACCTACAACTTCACCCGCATG
ATGAAGGCCATGACCCGGATCGGTCTGACTCTGGGTTTCTATGGTGGAAT
TGCCTTCATTGGCTGGTTCTACCAGATCATTTTCATGCCTGAGACCAAGA
ACAAGTCCCTCGAGGAAATCGATGAGCTTTTCTCCCGTCCCACTTCTGCT
ATTGTCAAGGAGAATCTGAAGAGTACGGGCGAGGTCATTGATGATTTGTT
CCACTTGCGCTTCAAGAAGGTGTTTTCGCCGCCGCCGAAGGAGGACTGAT
TGACTGATTGATTGATTCATGGGTTGGGAGTATTTTGACCCATGTATCGT
TTTTGGTCAATGTGGATGATGTATATGTTTATGAATATAGGATGATCTGA
AGATGAAACAAGAAGAAAAACAGAAAAAAGAAACGAAAAATTGGGTATCT
CCCCGCCTTTTTTGATTTACTTACGGGTTTATGAGGACTCTATATGCTCT
ATTTAATGTCTGATGTAACTACCTACTTACTACCATTTGCTTTTTCAACG
TCAATAATACCCATACCCATTCTGCCACATACATCTACATCTACCTGCAG
TATTTACCTACTAC
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Coding sequence (CDS) from alignment at ch3:3413257..3415970+

>KJC3_003914-T1 ID=KJC3_003914-T1|Name=KJC3_003914-T1|organism=Aspergillus niger KJC3|type=CDS|length=3330bp|location=Sequence derived from alignment at ch3:3413257..3415970+ (Aspergillus niger KJC3)
ATGGGTGTCGTACACGACCTGGACACCTCCCATGATGACCACAAGGAGGG
AACCGCCTTGGAGATGGACGATGTCCTCAAGGACCCCAAGGCCATCGAGG
AATTCAACGAAGCTGCCATGGATGCAGAGTTGTTGCAACTCGAAGAGCAG
CTGCAGGAGAGGAAGCCCGGTTGGTTCGTGGGCTTCTCCAATCCATCTGT
GTATACCTACGTCCTAGTGGCCTTTGCCTCCATGGGTGGTCTGCTCTCCG
GTCTGGATCAGTCCCTCATCAGTGGTGCCAACATCTACCTGCCCGATGCA
TTGAACCTTACCGACAACCAAAGTAGTCTTGTGGATGCTGGTATGCCTCT
GGGTGCCGTGGCCGGTGCCCTGATCCTCTCCCCCGCCAACGAGTACCTCG
GTCGTCGCATGGCCATCATCGTCTCCTGCATCCTGTATACTATCGGTGCC
GCCTTGGAGGCCGGTGCCATCAGCTTCGGTATGATCTTTGCTGGACGTTT
CGTGCTTGGTATGGGTGTGGGTCTGGAAGGTGGTACAGTCCCTGTGTATG
TCGCCGAGTCTGTGCCCCGCAAGATGCGTGGTAACCTCGTCTCACTATAC
CAGTTGAACATCGCTCTCGGTGAAGTCCTGGGCTATGCCGTGGCCGCCAT
CTTCCTCGATGTCAAGGGTAACTGGCGTTACATCCTGGGATCTTCCCTGG
TGTTCTCGACCATTCTGCTAGTGGGTATGCTTTTCCTGCCGGAGAGTCCG
CGTTACCTCATGCACAAGGGCCGGGCCGTGGAAGCCTACGGCGTATGGAA
GCGAATCCGCGGCTTCAACGACTATGACGCCAAGGACGAGTTCCTGGGCA
TGCGCCAGGCGGTGGATGCCGAGCGCGAAGAACAAGCCGCTACCAAGAAG
TACGCCTGGATGGACTTCATCACAGTGCCGCGCGCCCGTCGCGCCATGGT
CTACGCCAACATCATGGTCTTCCTGGGCCAATTCACCGGTGTCAACGCCA
TCATGTACTACATGAGCACACTGATGGATGCCATCGGCTTCGACGAGCGT
GACAGCGTCTTCATGTCTTTGGTTGGTGGTGGCTCCCTCCTGATCGGCAC
CATCCCGGCGGTGCTGTACATGGAACGGTTCGGCCGCCGCTACTGGGCCA
ATGCGATGCTCCCCGGGTTTTTCATCGGCTTAGTGCTGGTGGGCATCGGC
TACCAGATCAACTACCAGACCCACCCCAAAGCCGCCCAGGGCGTCTACCT
CACCGGCATCATCCTCTACCAGGCCTTCTTCGGCTCCTACGCGTGTCTCA
CCTGGGTCGTGCCCGCCGAAGTCTTCCCCACTTATTTGCGCAGTTACGGC
ATGACCACCGCCGACGCCAACCTCTTCCTCTGCTCCTTCATCGTCACCTA
CAACTTCACCCGCATGATGAAGGCCATGACCCGGATCGGTCTGACTCTGG
GTTTCTATGGTGGAATTGCCTTCATTGGCTGGTTCTACCAGATCATTTTC
ATGCCTGAGACCAAGAACAAGTCCCTCGAGGAAATCGATGAGCTTTTCTC
CCGTCCCACTTCTGCTATTGTCAAGGAGAATCTGAAGAGTACGGGCGAGG
TCATTGATGATTTGTTCCACTTGCGCTTCAAGAAGGTGTTTTCGCCGCCG
CCGAAGGAGGACTGAATGGGTGTCGTACACGACCTGGACACCTCCCATGA
TGACCACAAGGAGGGAACCGCCTTGGAGATGGACGATGTCCTCAAGGACC
CCAAGGCCATCGAGGAATTCAACGAAGCTGCCATGGATGCAGAGTTGTTG
CAACTCGAAGAGCAGCTGCAGGAGAGGAAGCCCGGTTGGTTCGTGGGCTT
CTCCAATCCATCTGTGTATACCTACGTCCTAGTGGCCTTTGCCTCCATGG
GTGGTCTGCTCTCCGGTCTGGATCAGTCCCTCATCAGTGGTGCCAACATC
TACCTGCCCGATGCATTGAACCTTACCGACAACCAAAGTAGTCTTGTGGA
TGCTGGTATGCCTCTGGGTGCCGTGGCCGGTGCCCTGATCCTCTCCCCCG
CCAACGAGTACCTCGGTCGTCGCATGGCCATCATCGTCTCCTGCATCCTG
TATACTATCGGTGCCGCCTTGGAGGCCGGTGCCATCAGCTTCGGTATGAT
CTTTGCTGGACGTTTCGTGCTTGGTATGGGTGTGGGTCTGGAAGGTGGTA
CAGTCCCTGTGTATGTCGCCGAGTCTGTGCCCCGCAAGATGCGTGGTAAC
CTCGTCTCACTATACCAGTTGAACATCGCTCTCGGTGAAGTCCTGGGCTA
TGCCGTGGCCGCCATCTTCCTCGATGTCAAGGGTAACTGGCGTTACATCC
TGGGATCTTCCCTGGTGTTCTCGACCATTCTGCTAGTGGGTATGCTTTTC
CTGCCGGAGAGTCCGCGTTACCTCATGCACAAGGGCCGGGCCGTGGAAGC
CTACGGCGTATGGAAGCGAATCCGCGGCTTCAACGACTATGACGCCAAGG
ACGAGTTCCTGGGCATGCGCCAGGCGGTGGATGCCGAGCGCGAAGAACAA
GCCGCTACCAAGAAGTACGCCTGGATGGACTTCATCACAGTGCCGCGCGC
CCGTCGCGCCATGGTCTACGCCAACATCATGGTCTTCCTGGGCCAATTCA
CCGGTGTCAACGCCATCATGTACTACATGAGCACACTGATGGATGCCATC
GGCTTCGACGAGCGTGACAGCGTCTTCATGTCTTTGGTTGGTGGTGGCTC
CCTCCTGATCGGCACCATCCCGGCGGTGCTGTACATGGAACGGTTCGGCC
GCCGCTACTGGGCCAATGCGATGCTCCCCGGGTTTTTCATCGGCTTAGTG
CTGGTGGGCATCGGCTACCAGATCAACTACCAGACCCACCCCAAAGCCGC
CCAGGGCGTCTACCTCACCGGCATCATCCTCTACCAGGCCTTCTTCGGCT
CCTACGCGTGTCTCACCTGGGTCGTGCCCGCCGAAGTCTTCCCCACTTAT
TTGCGCAGTTACGGCATGACCACCGCCGACGCCAACCTCTTCCTCTGCTC
CTTCATCGTCACCTACAACTTCACCCGCATGATGAAGGCCATGACCCGGA
TCGGTCTGACTCTGGGTTTCTATGGTGGAATTGCCTTCATTGGCTGGTTC
TACCAGATCATTTTCATGCCTGAGACCAAGAACAAGTCCCTCGAGGAAAT
CGATGAGCTTTTCTCCCGTCCCACTTCTGCTATTGTCAAGGAGAATCTGA
AGAGTACGGGCGAGGTCATTGATGATTTGTTCCACTTGCGCTTCAAGAAG
GTGTTTTCGCCGCCGCCGAAGGAGGACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003914KJC3_003914Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003914-T1.utr5p1KJC3_003914-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003914-T1.exon1KJC3_003914-T1.exon1Aspergillus niger KJC3exon
KJC3_003914-T1.exon2KJC3_003914-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003914-T1.cdsKJC3_003914-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003914-T1.utr3p1KJC3_003914-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003914-T1KJC3_003914-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3413257..3415970 +
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