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KJC3_003917-T1, KJC3_003917-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003917-T1
Unique NameKJC3_003917-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3427781..3429404-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003917-T1 ID=KJC3_003917-T1|Name=KJC3_003917-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1624bp|location=Sequence derived from alignment at ch3:3427781..3429404- (Aspergillus niger KJC3)
CGACCGTCTTCGGCTTCAATCAGACTGAACTAGTGTAGCATCAAATCTCT
GTCCATGCAAGTAGTTCCCTGGATTCAAGATGCGTTTTCGAACTCAAATA
GCCAACGCGTCTATCTTCTCCAGTAAGTGGCCTTCCCATCCCCTATCCCT
TTCACCCAAGCTCCCCAGCCAAATCAGCCGTGTTTCAACAACCGCCGCCA
TCACCATACTTACAATAGACGCACCCCCATACTAACTCCACATCCCCCCC
AGAACTAACCGCCTCCCTCTCCTCCCTGGGAAAGGTATGTTGGATGCGTC
TTGAAAAAGACTTCATCCGCTTCACCATCATCCCCGACCAAGGCACGCAA
GTATGGGCTCAACTCCCCATCGTACGTCTCCCCCATCCCCCAAGCCTACT
CCAAACTAACACTCCACCCCCAGGATACCATCTTCGAAGAAGAGTCTTAC
ATCTGTGAATCCAACACCGGAGCAATCAACCTCGAAGTCCCCATCGGCGC
ACTCCACCGCGCCCTGCGCTCCGCCGTATCCGCCAAACTAGCCAACCTCA
GACTCACCAAAAAGGGCAACGTACCTCTCCTAGCACTAACTATTCGCGCT
ACCTCCTGGACCACGACATCCAATGCCCTGGACATCCCAGAAGCAACGAC
AACAACAGACCACTCCTCATCCACCATCGACAATGCCACTGCCACTGCCA
GACCATCGGGCACTGGGCCCCGGGAACGCGAAACAGTAATCACCCAGGAA
ATCCCCATTAAAGTACTCCACGAGTCCGCAGTCGAAGGACTCCACCAGCC
ACGCTGTCGGGATCCAGATGTAAATATCCTTCTTCCAAGCTTAATCCAGT
TGAAGAGCATCTCGGAGCGTTTTACGAAATTGGCTACGACTTCTTCCAAT
AAAACATCAACAGCAGCAGTAGGGGGATCTACTTCAACAACACCATCACT
ATCATCACCCAAGCTTGAACTCTCCGCTAACATGCACGGCTCCCTCAAAG
TAGCCGTCGGGACGGACGCATTCCGGATATCGAGCGTCTGGACGGATCTA
CTGAATCCGAGTCTGGATCCGGGGCAGCTGGGCGATGGGAGAGAGTTGAA
TCAGTTGCCGAGTGAGAGGATGAGGGAGGTGCCGGCGGATGATGAGGCTG
GGTGGGCGAAGGTCAGGATTGATGGGAAGGATTGGAGTCGGATTTTGAGT
GTCGGCAGGTTGAATCCGAGGGTTGTTGCTTGTAAGTTCCTTTCTCTCTT
TCTTTTCCAATTTCTTTCTCTAGGATTTTAGGGCTAATGATGGCTTGGGG
ATAGCGTTTATTCATGAGACGGCTTTGGTGCTGTATGTCTTCTTACCTGG
GAGTTGGAATGAGCAGGATTCATGTCTGACGGTGAGTCACACTTTTCTTA
TAGTTTGCTGTGTGGGAGAAGGGCGAGGTGGGGCTGACTGGTTGTTGTGC
AGTATTATATCACTTCTTATGCGGTTTAGTTGAGGGCACAGCGCACATAG
CATATCATAGAATGATGATGGGTTTACGATGATGAGCTGGTATAGGAACA
CTACTTGTTCTGGGATGCATATATGAAATACGGATATAAAAAGTTACCTA
GGGGTTGAGGTGCTTATCTACTAT
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Coding sequence (CDS) from alignment at ch3:3427781..3429404-

>KJC3_003917-T1 ID=KJC3_003917-T1|Name=KJC3_003917-T1|organism=Aspergillus niger KJC3|type=CDS|length=5370bp|location=Sequence derived from alignment at ch3:3427781..3429404- (Aspergillus niger KJC3)
TATTATATCACTTCTTATGCGGTTTAGCGTTTATTCATGAGACGGCTTTG
GTGCTGTATGTCTTCTTACCTGGGAGTTGGAATGAGCAGGATTCATGTCT
GACGGATACCATCTTCGAAGAAGAGTCTTACATCTGTGAATCCAACACCG
GAGCAATCAACCTCGAAGTCCCCATCGGCGCACTCCACCGCGCCCTGCGC
TCCGCCGTATCCGCCAAACTAGCCAACCTCAGACTCACCAAAAAGGGCAA
CGTACCTCTCCTAGCACTAACTATTCGCGCTACCTCCTGGACCACGACAT
CCAATGCCCTGGACATCCCAGAAGCAACGACAACAACAGACCACTCCTCA
TCCACCATCGACAATGCCACTGCCACTGCCAGACCATCGGGCACTGGGCC
CCGGGAACGCGAAACAGTAATCACCCAGGAAATCCCCATTAAAGTACTCC
ACGAGTCCGCAGTCGAAGGACTCCACCAGCCACGCTGTCGGGATCCAGAT
GTAAATATCCTTCTTCCAAGCTTAATCCAGTTGAAGAGCATCTCGGAGCG
TTTTACGAAATTGGCTACGACTTCTTCCAATAAAACATCAACAGCAGCAG
TAGGGGGATCTACTTCAACAACACCATCACTATCATCACCCAAGCTTGAA
CTCTCCGCTAACATGCACGGCTCCCTCAAAGTAGCCGTCGGGACGGACGC
ATTCCGGATATCGAGCGTCTGGACGGATCTACTGAATCCGAGTCTGGATC
CGGGGCAGCTGGGCGATGGGAGAGAGTTGAATCAGTTGCCGAGTGAGAGG
ATGAGGGAGGTGCCGGCGGATGATGAGGCTGGGTGGGCGAAGGTCAGGAT
TGATGGGAAGGATTGGAGTCGGATTTTGAGTGTCGGCAGGTTGAATCCGA
GGGTTGTTGCTTAACTAACCGCCTCCCTCTCCTCCCTGGGAAAGGTATGT
TGGATGCGTCTTGAAAAAGACTTCATCCGCTTCACCATCATCCCCGACCA
AGGCACGCAAGTATGGGCTCAACTCCCCATCATGCGTTTTCGAACTCAAA
TAGCCAACGCGTCTATCTTCTCCATATTATATCACTTCTTATGCGGTTTA
GCGTTTATTCATGAGACGGCTTTGGTGCTGTATGTCTTCTTACCTGGGAG
TTGGAATGAGCAGGATTCATGTCTGACGGATACCATCTTCGAAGAAGAGT
CTTACATCTGTGAATCCAACACCGGAGCAATCAACCTCGAAGTCCCCATC
GGCGCACTCCACCGCGCCCTGCGCTCCGCCGTATCCGCCAAACTAGCCAA
CCTCAGACTCACCAAAAAGGGCAACGTACCTCTCCTAGCACTAACTATTC
GCGCTACCTCCTGGACCACGACATCCAATGCCCTGGACATCCCAGAAGCA
ACGACAACAACAGACCACTCCTCATCCACCATCGACAATGCCACTGCCAC
TGCCAGACCATCGGGCACTGGGCCCCGGGAACGCGAAACAGTAATCACCC
AGGAAATCCCCATTAAAGTACTCCACGAGTCCGCAGTCGAAGGACTCCAC
CAGCCACGCTGTCGGGATCCAGATGTAAATATCCTTCTTCCAAGCTTAAT
CCAGTTGAAGAGCATCTCGGAGCGTTTTACGAAATTGGCTACGACTTCTT
CCAATAAAACATCAACAGCAGCAGTAGGGGGATCTACTTCAACAACACCA
TCACTATCATCACCCAAGCTTGAACTCTCCGCTAACATGCACGGCTCCCT
CAAAGTAGCCGTCGGGACGGACGCATTCCGGATATCGAGCGTCTGGACGG
ATCTACTGAATCCGAGTCTGGATCCGGGGCAGCTGGGCGATGGGAGAGAG
TTGAATCAGTTGCCGAGTGAGAGGATGAGGGAGGTGCCGGCGGATGATGA
GGCTGGGTGGGCGAAGGTCAGGATTGATGGGAAGGATTGGAGTCGGATTT
TGAGTGTCGGCAGGTTGAATCCGAGGGTTGTTGCTTAACTAACCGCCTCC
CTCTCCTCCCTGGGAAAGGTATGTTGGATGCGTCTTGAAAAAGACTTCAT
CCGCTTCACCATCATCCCCGACCAAGGCACGCAAGTATGGGCTCAACTCC
CCATCATGCGTTTTCGAACTCAAATAGCCAACGCGTCTATCTTCTCCATA
TTATATCACTTCTTATGCGGTTTAGCGTTTATTCATGAGACGGCTTTGGT
GCTGTATGTCTTCTTACCTGGGAGTTGGAATGAGCAGGATTCATGTCTGA
CGGATACCATCTTCGAAGAAGAGTCTTACATCTGTGAATCCAACACCGGA
GCAATCAACCTCGAAGTCCCCATCGGCGCACTCCACCGCGCCCTGCGCTC
CGCCGTATCCGCCAAACTAGCCAACCTCAGACTCACCAAAAAGGGCAACG
TACCTCTCCTAGCACTAACTATTCGCGCTACCTCCTGGACCACGACATCC
AATGCCCTGGACATCCCAGAAGCAACGACAACAACAGACCACTCCTCATC
CACCATCGACAATGCCACTGCCACTGCCAGACCATCGGGCACTGGGCCCC
GGGAACGCGAAACAGTAATCACCCAGGAAATCCCCATTAAAGTACTCCAC
GAGTCCGCAGTCGAAGGACTCCACCAGCCACGCTGTCGGGATCCAGATGT
AAATATCCTTCTTCCAAGCTTAATCCAGTTGAAGAGCATCTCGGAGCGTT
TTACGAAATTGGCTACGACTTCTTCCAATAAAACATCAACAGCAGCAGTA
GGGGGATCTACTTCAACAACACCATCACTATCATCACCCAAGCTTGAACT
CTCCGCTAACATGCACGGCTCCCTCAAAGTAGCCGTCGGGACGGACGCAT
TCCGGATATCGAGCGTCTGGACGGATCTACTGAATCCGAGTCTGGATCCG
GGGCAGCTGGGCGATGGGAGAGAGTTGAATCAGTTGCCGAGTGAGAGGAT
GAGGGAGGTGCCGGCGGATGATGAGGCTGGGTGGGCGAAGGTCAGGATTG
ATGGGAAGGATTGGAGTCGGATTTTGAGTGTCGGCAGGTTGAATCCGAGG
GTTGTTGCTTAACTAACCGCCTCCCTCTCCTCCCTGGGAAAGGTATGTTG
GATGCGTCTTGAAAAAGACTTCATCCGCTTCACCATCATCCCCGACCAAG
GCACGCAAGTATGGGCTCAACTCCCCATCATGCGTTTTCGAACTCAAATA
GCCAACGCGTCTATCTTCTCCATATTATATCACTTCTTATGCGGTTTAGC
GTTTATTCATGAGACGGCTTTGGTGCTGTATGTCTTCTTACCTGGGAGTT
GGAATGAGCAGGATTCATGTCTGACGGATACCATCTTCGAAGAAGAGTCT
TACATCTGTGAATCCAACACCGGAGCAATCAACCTCGAAGTCCCCATCGG
CGCACTCCACCGCGCCCTGCGCTCCGCCGTATCCGCCAAACTAGCCAACC
TCAGACTCACCAAAAAGGGCAACGTACCTCTCCTAGCACTAACTATTCGC
GCTACCTCCTGGACCACGACATCCAATGCCCTGGACATCCCAGAAGCAAC
GACAACAACAGACCACTCCTCATCCACCATCGACAATGCCACTGCCACTG
CCAGACCATCGGGCACTGGGCCCCGGGAACGCGAAACAGTAATCACCCAG
GAAATCCCCATTAAAGTACTCCACGAGTCCGCAGTCGAAGGACTCCACCA
GCCACGCTGTCGGGATCCAGATGTAAATATCCTTCTTCCAAGCTTAATCC
AGTTGAAGAGCATCTCGGAGCGTTTTACGAAATTGGCTACGACTTCTTCC
AATAAAACATCAACAGCAGCAGTAGGGGGATCTACTTCAACAACACCATC
ACTATCATCACCCAAGCTTGAACTCTCCGCTAACATGCACGGCTCCCTCA
AAGTAGCCGTCGGGACGGACGCATTCCGGATATCGAGCGTCTGGACGGAT
CTACTGAATCCGAGTCTGGATCCGGGGCAGCTGGGCGATGGGAGAGAGTT
GAATCAGTTGCCGAGTGAGAGGATGAGGGAGGTGCCGGCGGATGATGAGG
CTGGGTGGGCGAAGGTCAGGATTGATGGGAAGGATTGGAGTCGGATTTTG
AGTGTCGGCAGGTTGAATCCGAGGGTTGTTGCTTAACTAACCGCCTCCCT
CTCCTCCCTGGGAAAGGTATGTTGGATGCGTCTTGAAAAAGACTTCATCC
GCTTCACCATCATCCCCGACCAAGGCACGCAAGTATGGGCTCAACTCCCC
ATCATGCGTTTTCGAACTCAAATAGCCAACGCGTCTATCTTCTCCATATT
ATATCACTTCTTATGCGGTTTAGCGTTTATTCATGAGACGGCTTTGGTGC
TGTATGTCTTCTTACCTGGGAGTTGGAATGAGCAGGATTCATGTCTGACG
GATACCATCTTCGAAGAAGAGTCTTACATCTGTGAATCCAACACCGGAGC
AATCAACCTCGAAGTCCCCATCGGCGCACTCCACCGCGCCCTGCGCTCCG
CCGTATCCGCCAAACTAGCCAACCTCAGACTCACCAAAAAGGGCAACGTA
CCTCTCCTAGCACTAACTATTCGCGCTACCTCCTGGACCACGACATCCAA
TGCCCTGGACATCCCAGAAGCAACGACAACAACAGACCACTCCTCATCCA
CCATCGACAATGCCACTGCCACTGCCAGACCATCGGGCACTGGGCCCCGG
GAACGCGAAACAGTAATCACCCAGGAAATCCCCATTAAAGTACTCCACGA
GTCCGCAGTCGAAGGACTCCACCAGCCACGCTGTCGGGATCCAGATGTAA
ATATCCTTCTTCCAAGCTTAATCCAGTTGAAGAGCATCTCGGAGCGTTTT
ACGAAATTGGCTACGACTTCTTCCAATAAAACATCAACAGCAGCAGTAGG
GGGATCTACTTCAACAACACCATCACTATCATCACCCAAGCTTGAACTCT
CCGCTAACATGCACGGCTCCCTCAAAGTAGCCGTCGGGACGGACGCATTC
CGGATATCGAGCGTCTGGACGGATCTACTGAATCCGAGTCTGGATCCGGG
GCAGCTGGGCGATGGGAGAGAGTTGAATCAGTTGCCGAGTGAGAGGATGA
GGGAGGTGCCGGCGGATGATGAGGCTGGGTGGGCGAAGGTCAGGATTGAT
GGGAAGGATTGGAGTCGGATTTTGAGTGTCGGCAGGTTGAATCCGAGGGT
TGTTGCTTAACTAACCGCCTCCCTCTCCTCCCTGGGAAAGGTATGTTGGA
TGCGTCTTGAAAAAGACTTCATCCGCTTCACCATCATCCCCGACCAAGGC
ACGCAAGTATGGGCTCAACTCCCCATCATGCGTTTTCGAACTCAAATAGC
CAACGCGTCTATCTTCTCCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030896checkpoint clamp complex
GO:0005730nucleolus
Vocabulary: Biological Process
TermDefinition
GO:0000077DNA damage checkpoint
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003917KJC3_003917Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003917-T1KJC3_003917-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003917-T1.cdsKJC3_003917-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003917-T1.utr3p1KJC3_003917-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003917-T1.exon5KJC3_003917-T1.exon5Aspergillus niger KJC3exon
KJC3_003917-T1.exon4KJC3_003917-T1.exon4Aspergillus niger KJC3exon
KJC3_003917-T1.exon3KJC3_003917-T1.exon3Aspergillus niger KJC3exon
KJC3_003917-T1.exon2KJC3_003917-T1.exon2Aspergillus niger KJC3exon
KJC3_003917-T1.exon1KJC3_003917-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003917-T1.utr5p1KJC3_003917-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007150
DBxrefInterPro:IPR016580
DBxrefPFAM:PF04005
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3427781..3429404 -
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