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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3431555..3436962+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003918-T1 ID=KJC3_003918-T1|Name=KJC3_003918-T1|organism=Aspergillus niger KJC3|type=mRNA|length=5408bp|location=Sequence derived from alignment at ch3:3431555..3436962+ (Aspergillus niger KJC3)
GTCTTCGAATCATCGTCGCCACTGGTCTCGTCACTCTTTTCTTCTGGGCC
CAAACTGAGCTGGTCTCTCCGATCCTAATCATCCCACCCTCGTTCTTTTA
TCTATCTATCTATCGGGCTCTTCCTGCAGCCACCCAACTTTCCCTCGCCC
TGGGCTCCCCTCAGCCGTTTTGAGGCCCTGCAGTGTGATCTATCATCATC
CGCCGAAACTCTGCTCCTCTAGACTTCTTATTCCCTCACTTTTCTTTTTC
TCGCCCTAGTTCCCTTCCTCACTCTTTTGTCAGACCTTTCCCCCGGTGTC
CTCTCTGCCACGGTGCTCCGACATACACCTACTGATTCATTCACTGCACC
TCCGCAACTGTCCATCCGGTGATCGCGATTGTACCAGCTCATCCCCAAAT
CCCCCTCACCCTCCCGACCTTCTGGCTGTCATCTTTATATAACTTTGGCG
GGATCGCGTCAGCATGCTCGCTCTTCAGCTACACTCACTCTCTTTTACAC
TTGATACTACAGCTCGACCCCCATCATTGAGAACCCGTTATTGATTATTC
CGCGACTGACCTGACCCGGTTATCTGGGAGCCGTCGTTCTCCCGGAGCTT
GCCGTTCTATCCCGACATGGCCAGCAGTCGCGTCAACCCCCTTCACCCAC
CCACTCGTCTGTCCACGGCGCGGTCCCAATCGCCGGGCCGTCCGGCGGTA
CCGAACTATCAGAATCTCGACCCGTTACTCGGCAACCTGTCCCCCGAATC
AACTCTCCAAGCGCTGTCCGCAACCGATGCCGTGCCCCGGAATGAGCAGG
CCGCCCACGATATCCTCTCCAAAAGTATCTCGCAAGTCTCCCCGGCAGAG
CGCGCCCTCGGTATCCGCGCAGCCATTGCAGCCCAGAAGCTCAATCTATG
GTATAAAGAAGTCCAGTCTTGGGAATGGCCGAATCGGAGTGACATTCAAC
TAGGGAAGGGCTTCGTACCCCCTCCCGGCGCTGCCGCTGAGGAGTACTGC
GGAAGCCTTCCCAAAGCCGTAGTAGATCAGCATGAAAAGCGGATTGAGGA
GATTCGCGATGGCATGGATGTCTTGGATGTGGATGAGCTTAAAGAGCACG
TTCTCAATGCCCACATTCCAGTCCGGTCTCGGCCTTCGTCAGCCAATAGC
ACCTTATCGGTGCCTCCACCACTCAGCTATGTTCAACTCAGTGACTTCAC
GGCCGTCATCACTGCCACCATTCTCCGCGCTCTTCCGCTTCTTTCGCGCT
TGAACAGTCTCTTGTCTACGTGGGACGTCCGATTGTTGGTTCTGCGCCAG
ATACCTGAACTGCTCAGGCGACTGCGTCTGGCGCGTTCCGAACTGGATTC
TGCCTTGGACTTGATAAAGTCACCCACTCTTCCTGACGAAGATGGTCCCT
TGTACTCTCGCCCTAACTATCATGCCAAAAGGGCCACCTTAGAACTGACT
GTTGTGTCTGCTGGTCGACAATTGGACCGCGTCCTCGATGCGCTTGAAGG
ACGCGAGGACTCGCTTCCCGAGAGCTGGATTGATGATCTGGAGGCTATCG
AGTCAGAGTTCGGAACATGGGTTATGGAAGCCGAACGACGTACTGTCGAA
AACGAATGGCGACGAACAATTGCCACTGCTGAAAAGGATGCCCAATATCA
TACCCCGGAGACAGCGCGGGCACAGGCACCACCCGAGATCAGAGACACCG
ACAAACTGGCCCTCAACACGTCCGTGCCTGTGTCACAGGCTGGCCACCTA
TTCCCCATGGAGACTATTGCCGAGGAAGAAGTCAGCAGTCCCGTCGAACC
GTCTGCCCCAAGTGACGCTCAGGATGATAAGAACTTAACGGCATCCGAAC
CGGCCGTCATGCCGGCTGCTCACAGTGTGAACGAAAACCTTGCATCTTCC
GGTACATCCGATGCGACGGATTCTCTGATCAAGTCTGTTAAAAGCACTGT
CTCCATCACCCCTCCACAGGAACCCTTGGCATCTAGCTCCACGGTCAACA
TCATTGCACCTTCTCCCGATGGGCTAGAAGAGACAGGTACCCGGACCGAT
GAACGTCGGGCGCTTCCACCTGTCACTTCGGAGGCTACCCAGTCCTTGGA
GGAACCGGAGACTAGCAACGAGACGAGCGCGTGCAATGACTCGACTCCTG
ATCACCCTGATTCCGAGCATCATTCCTCCTCGCTTGTTCCTCAACAGACA
ATCACAACCATGCCATCTGTCGGCCTATGCGAAACCTGTCCGAGCCTACT
TGAAGAAGAGACCCCACGGGCTTCTTTAGACATCCAGGCTCGCGACGCAG
GGTTAACCGACCCGTTCAAGATGGCTACAGATGCGCCTGCATTGTTTGAG
GATGGGCGCGCAGATGTAATGCCATCGTTGGAATCTGATGCAGTTCGTCA
TTCTTCGCCCGAAGTAAATCTGCAGGCTCCTGCTAGCCCTGATGCACAGT
CATCGGACGCAGGTAGTGTGATTGTACGGCGACGAACAAGTTCAGCCCAG
TCGCCTCTCAGCCAACAGGAAAAGCTTCCCGCAGATAACGAAGTGGTATC
CAGAGACACCCACAGCACTAGTCCCGTGGTTGAAAGCCGCGAGCAACGGC
AGCTCACTCTGGACAAGAGTGAAGTAGCCAGCCCAGTCAGTGTGGCGGCC
CAAACCACTTCCAATGATAGTCCTGCTGCGCAGTCAGGCAACCGAAGAGA
CTCTTGTCAATTGGTACCTGCGAATGCTGTTCTTGAGTCTCCTGCCCGCT
CGGCAAACTCTAAAAATGATAAGCAGCCCCCAAGTCACTCTATGAACAAC
GTGCACCAAGAGTCCCATGGTGGCAATACACCCAAAAAGCCTCTGGAGAG
TCCGATCAAACTATCGAGGTCTCGACCAGGGCGCTTATCTTTTGAAAAGG
AGAAAAACAAATCTCGAGGCCGGCGCACGTCTACTGATTCGTCTTGTTCT
GATTATCCATCACTCGTCTCCAGCCCTGAGATTCACGAGCCCCGTACATC
CTCTTCCAATGGAACGCCTCTGCTGCTTGAGACTCCTCCACCATTTCAGG
ATGGCTATCAGTCATCCGATCCAGTACCACCTGGGAGCGACCACACGTTG
CGAGAAGATCGTTTACTCCGCCTGGATAACCAAAAATCATCCCCACGTGC
CAATTTCGCCCATAATCGAAACCTCAGTCTTCCCTTGCAGCGTTTCATCA
ACGAAAGGTTGGAGATGAATTACGATGACGAAAGCGGTAGTGATATGGAT
GGCGTCGCTTCCAACAGGAAGTCCACGGATGTGTATGCGGATTTGCGGCT
GGGCCAGAAAAAGGCACTGTTGCCTGCACACATCAGCAAGTTCGCCATTC
CCTCCAACAGCGCACAGCGCGCTGCAACCCAGCCTTTGGATGCACCAAGT
CAAGGAAGCCCTAGACCGGTCACCAATGGCAACACCGCTAAAGTTCTGTC
CAAGGCCTGGGAGCACAAGAAGGGCTCTGTTCCGAAAAATACAAACCGAA
GTGGTCTGCAGTCGGAGCCGCCTGTACACTCAAGCACCAACCGCTTGAGG
AGACAGTTAACTTCGCATCCTAGTCTTGAGAGTATCGGGGCGTATAGATC
CAACACCCGATCTGGCGATGACACGTCTTCGGTTACAGCTATTTCCAGGG
CTGGATCTCGACCATCCACCCCAGGCTCACAGCTGAGGAAACCCAAAGAT
CACCTGGACGAGAAAATCAGTTCTATCTTGTCAACCCTTCCTGCTCGAAT
CCATCTGATGTCTGCTGATGGCCAAGACTTTGATGCGGGTTCTGCGGCGA
CGTCAATCCCCTTGAAGGCTAGGGAACGGTTTCGTTCCATATCGCCCCAG
GGAACACCGTCCCGTAGCAGCACACCTACCCCCTCCTTGACCCTGACAGC
TGCGCCCTCGCGCAGGAGATATTCGCATGCACACGCCCCAGAGGAGAGCT
CCGTGAAGCTCTACCACCTCCATCGAGGTGGAAAGGTTGCCCCGACCAAA
CTTTTTGTTCGGTCAGTGGGTGAGAATGGAGAACGCGTTATGGTTCGAGT
TGGCGGTGGATGGGCAGACCTGGCTGAATATTTGAGGGAGTATGCCATCC
ACCATGGACGCCGGCATGTTTCAGATACCCCTCGTGTTGAAGTCCAGGGC
CTGTCCACGCGTACCTCTCCCACGTACTCCGTTAGTGGGCGTCGCACTCC
CTCCCGGCCGCGGTCTGTCATCGGCAATCGGCCATCTTCATCATTGGCTG
TGCGCAAAACCAGACGCACCTCGAACGTGTCGGATGTAACCGAGTTCCGG
GCGGCGCAGGCAGCTGGCGACTCGCTCACTGCCTCGTACTCGCCTATGTC
GACTGTGTCATCCCGCAGAAGACTGTCAGCTTCATCCAATGCCTCAATGG
GCGCTGCCTCTTCAGCCAGCGAGTTCCGTCACGGATCGTATTCTCCTTCC
ACCACTGCTGCAGGTAGCAACTCTCATTCGATTCCACTCGGCCTTGCAGG
GCCGAAGCCGCGGTCGAGAAATGTCTCGATCAGCCCAGAGAGTGAGGCGT
GGGTTGAAGATGTTCTTGGCCAAGCTCGGAGGAGCTCGTCCTTAAGGCCT
TACAACTATGGCCTGTCATCTCAGGACCCGGAGCCTGCTTCAGCCAAGGC
TCCAACCATCCCCAAGTCGAGAAGTATCAGCGACCTGGGAATGGCCGGTT
CTAGCAGACGCGTCGCACTACGCGGACTTGCAAAACGATAAACCTACAAA
CAATCACCCTAATCTTAATCCTTCCATACGCTCACCTGATCTACACTCTT
TCTCCCACACACACTCTCTCTCCGCCCCTCCTCTCGCCTGCATTGTCTAC
TAGTACTGGCGTTTTGCCGTTTTCCTGGGTTTCTCGGTTTGGACACGGGG
TACTAAAAGTGTTAGACAGCTGCATTGTCCGTTTCCTTCTTTTTCGGTTG
CATTATCGGGCGAAGGTTTCTTTCTCTTTCTCTTCTTTCACATTCTTCCT
TTTCATCCAAGACATGCATCATTCTGTCTTGGCTATCTTCATCTTTTCCC
ACCATTGCATCAGCGGGTTTCATTCTTGTTTTACCACATTTTTTTCTTTC
TCGTTACTCTCTCTCCTCTATCTTGGAAGAGATGTTTTCTCCACCTTCGG
TCCTGGTTGACCGGCCACATTTCCGTTCTATTTTCGTGACTCCTGTCTGT
ATCTGTCTGTGTCCGTTTGTTCGTGTTCACTTATTATTATATTTAGCCCT
TGATTTGTATGTAGATACCCTTAGGTAGGCTTGGGTCTTTTGTTGTTGTT
GATGTCGTCCGTCCGTCCTCTTGCTGGATAGAAAGAAGGACTGACTGGCT
GGCTTGCTTGATAACTTACTTAGTACATAGTGAGGGATTATTTGAATCTG
TTGATATT back to topCoding sequence (CDS) from alignment at ch3:3431555..3436962+ >KJC3_003918-T1 ID=KJC3_003918-T1|Name=KJC3_003918-T1|organism=Aspergillus niger KJC3|type=CDS|length=4125bp|location=Sequence derived from alignment at ch3:3431555..3436962+ (Aspergillus niger KJC3)
ATGGCCAGCAGTCGCGTCAACCCCCTTCACCCACCCACTCGTCTGTCCAC
GGCGCGGTCCCAATCGCCGGGCCGTCCGGCGGTACCGAACTATCAGAATC
TCGACCCGTTACTCGGCAACCTGTCCCCCGAATCAACTCTCCAAGCGCTG
TCCGCAACCGATGCCGTGCCCCGGAATGAGCAGGCCGCCCACGATATCCT
CTCCAAAAGTATCTCGCAAGTCTCCCCGGCAGAGCGCGCCCTCGGTATCC
GCGCAGCCATTGCAGCCCAGAAGCTCAATCTATGGTATAAAGAAGTCCAG
TCTTGGGAATGGCCGAATCGGAGTGACATTCAACTAGGGAAGGGCTTCGT
ACCCCCTCCCGGCGCTGCCGCTGAGGAGTACTGCGGAAGCCTTCCCAAAG
CCGTAGTAGATCAGCATGAAAAGCGGATTGAGGAGATTCGCGATGGCATG
GATGTCTTGGATGTGGATGAGCTTAAAGAGCACGTTCTCAATGCCCACAT
TCCAGTCCGGTCTCGGCCTTCGTCAGCCAATAGCACCTTATCGGTGCCTC
CACCACTCAGCTATGTTCAACTCAGTGACTTCACGGCCGTCATCACTGCC
ACCATTCTCCGCGCTCTTCCGCTTCTTTCGCGCTTGAACAGTCTCTTGTC
TACGTGGGACGTCCGATTGTTGGTTCTGCGCCAGATACCTGAACTGCTCA
GGCGACTGCGTCTGGCGCGTTCCGAACTGGATTCTGCCTTGGACTTGATA
AAGTCACCCACTCTTCCTGACGAAGATGGTCCCTTGTACTCTCGCCCTAA
CTATCATGCCAAAAGGGCCACCTTAGAACTGACTGTTGTGTCTGCTGGTC
GACAATTGGACCGCGTCCTCGATGCGCTTGAAGGACGCGAGGACTCGCTT
CCCGAGAGCTGGATTGATGATCTGGAGGCTATCGAGTCAGAGTTCGGAAC
ATGGGTTATGGAAGCCGAACGACGTACTGTCGAAAACGAATGGCGACGAA
CAATTGCCACTGCTGAAAAGGATGCCCAATATCATACCCCGGAGACAGCG
CGGGCACAGGCACCACCCGAGATCAGAGACACCGACAAACTGGCCCTCAA
CACGTCCGTGCCTGTGTCACAGGCTGGCCACCTATTCCCCATGGAGACTA
TTGCCGAGGAAGAAGTCAGCAGTCCCGTCGAACCGTCTGCCCCAAGTGAC
GCTCAGGATGATAAGAACTTAACGGCATCCGAACCGGCCGTCATGCCGGC
TGCTCACAGTGTGAACGAAAACCTTGCATCTTCCGGTACATCCGATGCGA
CGGATTCTCTGATCAAGTCTGTTAAAAGCACTGTCTCCATCACCCCTCCA
CAGGAACCCTTGGCATCTAGCTCCACGGTCAACATCATTGCACCTTCTCC
CGATGGGCTAGAAGAGACAGGTACCCGGACCGATGAACGTCGGGCGCTTC
CACCTGTCACTTCGGAGGCTACCCAGTCCTTGGAGGAACCGGAGACTAGC
AACGAGACGAGCGCGTGCAATGACTCGACTCCTGATCACCCTGATTCCGA
GCATCATTCCTCCTCGCTTGTTCCTCAACAGACAATCACAACCATGCCAT
CTGTCGGCCTATGCGAAACCTGTCCGAGCCTACTTGAAGAAGAGACCCCA
CGGGCTTCTTTAGACATCCAGGCTCGCGACGCAGGGTTAACCGACCCGTT
CAAGATGGCTACAGATGCGCCTGCATTGTTTGAGGATGGGCGCGCAGATG
TAATGCCATCGTTGGAATCTGATGCAGTTCGTCATTCTTCGCCCGAAGTA
AATCTGCAGGCTCCTGCTAGCCCTGATGCACAGTCATCGGACGCAGGTAG
TGTGATTGTACGGCGACGAACAAGTTCAGCCCAGTCGCCTCTCAGCCAAC
AGGAAAAGCTTCCCGCAGATAACGAAGTGGTATCCAGAGACACCCACAGC
ACTAGTCCCGTGGTTGAAAGCCGCGAGCAACGGCAGCTCACTCTGGACAA
GAGTGAAGTAGCCAGCCCAGTCAGTGTGGCGGCCCAAACCACTTCCAATG
ATAGTCCTGCTGCGCAGTCAGGCAACCGAAGAGACTCTTGTCAATTGGTA
CCTGCGAATGCTGTTCTTGAGTCTCCTGCCCGCTCGGCAAACTCTAAAAA
TGATAAGCAGCCCCCAAGTCACTCTATGAACAACGTGCACCAAGAGTCCC
ATGGTGGCAATACACCCAAAAAGCCTCTGGAGAGTCCGATCAAACTATCG
AGGTCTCGACCAGGGCGCTTATCTTTTGAAAAGGAGAAAAACAAATCTCG
AGGCCGGCGCACGTCTACTGATTCGTCTTGTTCTGATTATCCATCACTCG
TCTCCAGCCCTGAGATTCACGAGCCCCGTACATCCTCTTCCAATGGAACG
CCTCTGCTGCTTGAGACTCCTCCACCATTTCAGGATGGCTATCAGTCATC
CGATCCAGTACCACCTGGGAGCGACCACACGTTGCGAGAAGATCGTTTAC
TCCGCCTGGATAACCAAAAATCATCCCCACGTGCCAATTTCGCCCATAAT
CGAAACCTCAGTCTTCCCTTGCAGCGTTTCATCAACGAAAGGTTGGAGAT
GAATTACGATGACGAAAGCGGTAGTGATATGGATGGCGTCGCTTCCAACA
GGAAGTCCACGGATGTGTATGCGGATTTGCGGCTGGGCCAGAAAAAGGCA
CTGTTGCCTGCACACATCAGCAAGTTCGCCATTCCCTCCAACAGCGCACA
GCGCGCTGCAACCCAGCCTTTGGATGCACCAAGTCAAGGAAGCCCTAGAC
CGGTCACCAATGGCAACACCGCTAAAGTTCTGTCCAAGGCCTGGGAGCAC
AAGAAGGGCTCTGTTCCGAAAAATACAAACCGAAGTGGTCTGCAGTCGGA
GCCGCCTGTACACTCAAGCACCAACCGCTTGAGGAGACAGTTAACTTCGC
ATCCTAGTCTTGAGAGTATCGGGGCGTATAGATCCAACACCCGATCTGGC
GATGACACGTCTTCGGTTACAGCTATTTCCAGGGCTGGATCTCGACCATC
CACCCCAGGCTCACAGCTGAGGAAACCCAAAGATCACCTGGACGAGAAAA
TCAGTTCTATCTTGTCAACCCTTCCTGCTCGAATCCATCTGATGTCTGCT
GATGGCCAAGACTTTGATGCGGGTTCTGCGGCGACGTCAATCCCCTTGAA
GGCTAGGGAACGGTTTCGTTCCATATCGCCCCAGGGAACACCGTCCCGTA
GCAGCACACCTACCCCCTCCTTGACCCTGACAGCTGCGCCCTCGCGCAGG
AGATATTCGCATGCACACGCCCCAGAGGAGAGCTCCGTGAAGCTCTACCA
CCTCCATCGAGGTGGAAAGGTTGCCCCGACCAAACTTTTTGTTCGGTCAG
TGGGTGAGAATGGAGAACGCGTTATGGTTCGAGTTGGCGGTGGATGGGCA
GACCTGGCTGAATATTTGAGGGAGTATGCCATCCACCATGGACGCCGGCA
TGTTTCAGATACCCCTCGTGTTGAAGTCCAGGGCCTGTCCACGCGTACCT
CTCCCACGTACTCCGTTAGTGGGCGTCGCACTCCCTCCCGGCCGCGGTCT
GTCATCGGCAATCGGCCATCTTCATCATTGGCTGTGCGCAAAACCAGACG
CACCTCGAACGTGTCGGATGTAACCGAGTTCCGGGCGGCGCAGGCAGCTG
GCGACTCGCTCACTGCCTCGTACTCGCCTATGTCGACTGTGTCATCCCGC
AGAAGACTGTCAGCTTCATCCAATGCCTCAATGGGCGCTGCCTCTTCAGC
CAGCGAGTTCCGTCACGGATCGTATTCTCCTTCCACCACTGCTGCAGGTA
GCAACTCTCATTCGATTCCACTCGGCCTTGCAGGGCCGAAGCCGCGGTCG
AGAAATGTCTCGATCAGCCCAGAGAGTGAGGCGTGGGTTGAAGATGTTCT
TGGCCAAGCTCGGAGGAGCTCGTCCTTAAGGCCTTACAACTATGGCCTGT
CATCTCAGGACCCGGAGCCTGCTTCAGCCAAGGCTCCAACCATCCCCAAG
TCGAGAAGTATCAGCGACCTGGGAATGGCCGGTTCTAGCAGACGCGTCGC
ACTACGCGGACTTGCAAAACGATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008017 | microtubule binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003918-T1.utr5p1 | KJC3_003918-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003918-T1.utr3p1 | KJC3_003918-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036534 |
| DBxref | InterPro:IPR003108 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3431555..3436962 + |
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