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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3459135..3461434- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003925-T1 ID=KJC3_003925-T1|Name=KJC3_003925-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2300bp|location=Sequence derived from alignment at ch3:3459135..3461434- (Aspergillus niger KJC3)
ATGAGGACAGAAGAGCACAATCCGCTGAACCGGCGACATTCCTCTACGCT
GCACTATCAGACCTTCGACACCCCGCCGCCGAAATCTCGCGGAAGACCGA
ACTCCGGTCAATCTGGATCATCAGGCGACGACTCGCATCACCAACCAAGC
GATTCTCAACATGGATCGGGGCACGGATCGCCCCTGCCGAAGAAACAGAT
GGCGGTGCTTGCGATGATATCCCTCTGCGAGCAGACTGCTTTCAATTCCG
TCAGTCCCTACCTACCCGATATGGCGTCATCCTTCCCTGAAGTCGAACCC
GATATGGTCGGTGTATACGTCGGAGCGATTGCTACTGCGTTCGCAGTAGC
ACAGTTGATCACAAATTACTTCTGGGGCTGGCTATCTGATCGCATAGGGC
GGAAACCGGTTATTCTGCTGGGTACAATCCTCACGGCGGCTTGCTTTTGC
GCTTTTGGATTTTGCAGAACGCTTTACCAGGCAATCGTTGTTCAGGCGAT
GATGGGTGCCGTCAATGGCAACCAAGGTCTGGTCTCTACATGCCTGGGTG
AGATCACTGATCGGAGCAACCAGTCGAAGGCCTTTACCTATCTGCCTGTT
CTTTATGGTATTGGTGGCATAACCGGACCTCTCCTGGGTGGCTTGTTGGT
CTTCGAGCGGAATCCCTTCGACAAGAGCCAACCCAACCCCTTCCCGTACC
TCATGCCGAACCTGCTCGCCGGTGGAGTCTTAGTTGTGGACTTCGTCCTG
TCGATATTCTTCCTCGAAGAGAGCTTGGAGGATGCAGAGACCTTGCCAGA
TTTCAAGCAAAGAGTTCGTGCTCTGTTTGCGTGGTTGTGGGAGTGGACTA
GTTCTGCAAAGAGCGCGAGTCGGGTAAAACCGCCACATACCGGCAGTTAT
CGCCATCTTCGTACAAGCTCGTACGAAAGTCAGGATCATGATAGCGAACT
AGACTCGGCGTCAGAGGTATCGGAGACTCGCCAGACACACCACGAGTCAT
TGACACGGAGTGAAATATTCAATCGGGATACTGTGCTGCTCCTTTTGACC
TATCTCATCTTCGCTCTCTGCAACGTTGCCTTCAACTCCCTGTTTCCTAT
CTTCTCGCAAGCCCGTCCCCCACTTGGGCGTGGCCTGACTCCCTCGGAGA
TCGGTCTTGCTCAAGGGTTCTCTGGCTTTGTCACAATTGTTTTTCAAATC
TGCATTTTCGGCAAATTGAGAGACAAGATGGGAAATCGCTGGTCTTACCG
AGCGGGCCTTTTTGGCTTTGTCATTTCATTCCTGCTAATGCCTTTTGTCG
GGTACAAGAGCGATGGCGGTAATGGAATAAGCGGGAAGACCGCGCTTTTG
GCGATCGAGTTGTGCTTTGCGTTGCTCGTCAAAACAGTCGCTTCAGTTGG
CGGGCTGACAAGCGCACTTCTACTGGTAAGTAGTTGGATATCTCTGTCAA
TGACAGAAGAAAGATCATCAAGCTAACCATGGCCAACCTAGATTACCAAC
TCCGCCCCGGATCATGCCGTTTTAGGATCCCTCAACGGACTCGCTCAAAC
TCTTTCGGCCGCAGGCCGTGCAGTCGGCCCATTTCTATCCGGCAGCCTAT
TCTCTCTCGCATCCAGACTGAAGCACAAAGGAGAAGCCATGCCATTCGGC
GTTTTCGCCGCCGTTTCCTTTGTCGGGTTCATCCTGAGTTTCGGCATCCG
TGGCCGCTCCCTCGAAGCCGAGGACTGGGAAAGCGATAGCGACGACACTT
ACAAGTCAGACGATGACGAAGCTGGCGCGTGAGAGGGGGCCCGTATGCGC
CCTTCTTACTCCTAGCAATCAATCAATCGATCCTAACATATAAACCGAGC
CAAAACAAGAATAATCTTTACGACCTCACGATTTATCACTTACAGTTCCG
TTCCATAGACAAGAGCACGCCTTTCGCTAATTACCTTCCTGAGCTTGAGG
ACCTTACTATTTGAGCACGTCTTTCATAGTGCATTTTCATTCATTGATTC
TTTCATTCATTTCCCAATGCATACAGACATGCATGGTGTTTGGCGTCGTT
ATGTGCGCGCATTGTATATGCTGGTACGAAGACGAGACTTCTTTTGATTT
GGACTACGGATAGATATTGATAGCCTTGGGTGTTTCTCTGACCTCTACTA
CCCGATAGAATGGTCGTGTTGTGTTCCAGTCACGCTTTCTTTCTTTCTTT
CTTTCGCCTTCCATTGGCAGCTGTATAAATAGGATATCAGTTTGCGGTTT
AGCTTATGATGTACCCTTCCTTGTTAGAAATTTGAAACTCAATCACAGCT
back to topCoding sequence (CDS) from alignment at ch3:3459135..3461434- >KJC3_003925-T1 ID=KJC3_003925-T1|Name=KJC3_003925-T1|organism=Aspergillus niger KJC3|type=CDS|length=3432bp|location=Sequence derived from alignment at ch3:3459135..3461434- (Aspergillus niger KJC3)
ATTACCAACTCCGCCCCGGATCATGCCGTTTTAGGATCCCTCAACGGACT
CGCTCAAACTCTTTCGGCCGCAGGCCGTGCAGTCGGCCCATTTCTATCCG
GCAGCCTATTCTCTCTCGCATCCAGACTGAAGCACAAAGGAGAAGCCATG
CCATTCGGCGTTTTCGCCGCCGTTTCCTTTGTCGGGTTCATCCTGAGTTT
CGGCATCCGTGGCCGCTCCCTCGAAGCCGAGGACTGGGAAAGCGATAGCG
ACGACACTTACAAGTCAGACGATGACGAAGCTGGCGCGTGAATGAGGACA
GAAGAGCACAATCCGCTGAACCGGCGACATTCCTCTACGCTGCACTATCA
GACCTTCGACACCCCGCCGCCGAAATCTCGCGGAAGACCGAACTCCGGTC
AATCTGGATCATCAGGCGACGACTCGCATCACCAACCAAGCGATTCTCAA
CATGGATCGGGGCACGGATCGCCCCTGCCGAAGAAACAGATGGCGGTGCT
TGCGATGATATCCCTCTGCGAGCAGACTGCTTTCAATTCCGTCAGTCCCT
ACCTACCCGATATGGCGTCATCCTTCCCTGAAGTCGAACCCGATATGGTC
GGTGTATACGTCGGAGCGATTGCTACTGCGTTCGCAGTAGCACAGTTGAT
CACAAATTACTTCTGGGGCTGGCTATCTGATCGCATAGGGCGGAAACCGG
TTATTCTGCTGGGTACAATCCTCACGGCGGCTTGCTTTTGCGCTTTTGGA
TTTTGCAGAACGCTTTACCAGGCAATCGTTGTTCAGGCGATGATGGGTGC
CGTCAATGGCAACCAAGGTCTGGTCTCTACATGCCTGGGTGAGATCACTG
ATCGGAGCAACCAGTCGAAGGCCTTTACCTATCTGCCTGTTCTTTATGGT
ATTGGTGGCATAACCGGACCTCTCCTGGGTGGCTTGTTGGTCTTCGAGCG
GAATCCCTTCGACAAGAGCCAACCCAACCCCTTCCCGTACCTCATGCCGA
ACCTGCTCGCCGGTGGAGTCTTAGTTGTGGACTTCGTCCTGTCGATATTC
TTCCTCGAAGAGAGCTTGGAGGATGCAGAGACCTTGCCAGATTTCAAGCA
AAGAGTTCGTGCTCTGTTTGCGTGGTTGTGGGAGTGGACTAGTTCTGCAA
AGAGCGCGAGTCGGGTAAAACCGCCACATACCGGCAGTTATCGCCATCTT
CGTACAAGCTCGTACGAAAGTCAGGATCATGATAGCGAACTAGACTCGGC
GTCAGAGGTATCGGAGACTCGCCAGACACACCACGAGTCATTGACACGGA
GTGAAATATTCAATCGGGATACTGTGCTGCTCCTTTTGACCTATCTCATC
TTCGCTCTCTGCAACGTTGCCTTCAACTCCCTGTTTCCTATCTTCTCGCA
AGCCCGTCCCCCACTTGGGCGTGGCCTGACTCCCTCGGAGATCGGTCTTG
CTCAAGGGTTCTCTGGCTTTGTCACAATTGTTTTTCAAATCTGCATTTTC
GGCAAATTGAGAGACAAGATGGGAAATCGCTGGTCTTACCGAGCGGGCCT
TTTTGGCTTTGTCATTTCATTCCTGCTAATGCCTTTTGTCGGGTACAAGA
GCGATGGCGGTAATGGAATAAGCGGGAAGACCGCGCTTTTGGCGATCGAG
TTGTGCTTTGCGTTGCTCGTCAAAACAGTCGCTTCAGTTGGCGGGCTGAC
AAGCGCACTTCTACTGATTACCAACTCCGCCCCGGATCATGCCGTTTTAG
GATCCCTCAACGGACTCGCTCAAACTCTTTCGGCCGCAGGCCGTGCAGTC
GGCCCATTTCTATCCGGCAGCCTATTCTCTCTCGCATCCAGACTGAAGCA
CAAAGGAGAAGCCATGCCATTCGGCGTTTTCGCCGCCGTTTCCTTTGTCG
GGTTCATCCTGAGTTTCGGCATCCGTGGCCGCTCCCTCGAAGCCGAGGAC
TGGGAAAGCGATAGCGACGACACTTACAAGTCAGACGATGACGAAGCTGG
CGCGTGAATGAGGACAGAAGAGCACAATCCGCTGAACCGGCGACATTCCT
CTACGCTGCACTATCAGACCTTCGACACCCCGCCGCCGAAATCTCGCGGA
AGACCGAACTCCGGTCAATCTGGATCATCAGGCGACGACTCGCATCACCA
ACCAAGCGATTCTCAACATGGATCGGGGCACGGATCGCCCCTGCCGAAGA
AACAGATGGCGGTGCTTGCGATGATATCCCTCTGCGAGCAGACTGCTTTC
AATTCCGTCAGTCCCTACCTACCCGATATGGCGTCATCCTTCCCTGAAGT
CGAACCCGATATGGTCGGTGTATACGTCGGAGCGATTGCTACTGCGTTCG
CAGTAGCACAGTTGATCACAAATTACTTCTGGGGCTGGCTATCTGATCGC
ATAGGGCGGAAACCGGTTATTCTGCTGGGTACAATCCTCACGGCGGCTTG
CTTTTGCGCTTTTGGATTTTGCAGAACGCTTTACCAGGCAATCGTTGTTC
AGGCGATGATGGGTGCCGTCAATGGCAACCAAGGTCTGGTCTCTACATGC
CTGGGTGAGATCACTGATCGGAGCAACCAGTCGAAGGCCTTTACCTATCT
GCCTGTTCTTTATGGTATTGGTGGCATAACCGGACCTCTCCTGGGTGGCT
TGTTGGTCTTCGAGCGGAATCCCTTCGACAAGAGCCAACCCAACCCCTTC
CCGTACCTCATGCCGAACCTGCTCGCCGGTGGAGTCTTAGTTGTGGACTT
CGTCCTGTCGATATTCTTCCTCGAAGAGAGCTTGGAGGATGCAGAGACCT
TGCCAGATTTCAAGCAAAGAGTTCGTGCTCTGTTTGCGTGGTTGTGGGAG
TGGACTAGTTCTGCAAAGAGCGCGAGTCGGGTAAAACCGCCACATACCGG
CAGTTATCGCCATCTTCGTACAAGCTCGTACGAAAGTCAGGATCATGATA
GCGAACTAGACTCGGCGTCAGAGGTATCGGAGACTCGCCAGACACACCAC
GAGTCATTGACACGGAGTGAAATATTCAATCGGGATACTGTGCTGCTCCT
TTTGACCTATCTCATCTTCGCTCTCTGCAACGTTGCCTTCAACTCCCTGT
TTCCTATCTTCTCGCAAGCCCGTCCCCCACTTGGGCGTGGCCTGACTCCC
TCGGAGATCGGTCTTGCTCAAGGGTTCTCTGGCTTTGTCACAATTGTTTT
TCAAATCTGCATTTTCGGCAAATTGAGAGACAAGATGGGAAATCGCTGGT
CTTACCGAGCGGGCCTTTTTGGCTTTGTCATTTCATTCCTGCTAATGCCT
TTTGTCGGGTACAAGAGCGATGGCGGTAATGGAATAAGCGGGAAGACCGC
GCTTTTGGCGATCGAGTTGTGCTTTGCGTTGCTCGTCAAAACAGTCGCTT
CAGTTGGCGGGCTGACAAGCGCACTTCTACTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003925-T1.utr3p1 | KJC3_003925-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3459135..3461434 - |
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