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KJC3_003928-T1, KJC3_003928-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003928-T1
Unique NameKJC3_003928-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3462397..3464798-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003928-T1 ID=KJC3_003928-T1|Name=KJC3_003928-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2402bp|location=Sequence derived from alignment at ch3:3462397..3464798- (Aspergillus niger KJC3)
CGCCCGCAAATTCCCCACTGCGCGGATCTCGCCGTTCACTCCAACATCAT
TGTTCACTCGCCTCCGTACCCCAGTTTCGCCAATACAGCATATCTACTTA
TCAGCAGCATGTTGGAAGCATTCGAGATCTTGACTGCCTCAGGGGTAGTC
CTGTGGTCGAAATCGTACGCGCCCGTCGGGGCGCATATTGTTAACAGCCT
TATCAATGATGTCTTCATCGAGGAGAAGGTCCAGCTTCAGGCAACGAACA
ATGCTGCCCCTTCGTTCAAGAAAGAGAAGTACACTCTAAAGTGGAAAAGA
GTGAAGGAATTCGACTTGATCTTTGTGGTATGCTGTTGTCTCCGACCGCG
TCTCAGCTCTTCTGTCTCTGACCGCAAATCGCTCTAGGCCGTCTATCAGT
CTCTCTTACAGCTTGGTTGGATCGACAAACTCCTGGACAACATTTCCACC
CTGTACATCGATTTGTACAAGGATCAATTACGAAGTACTCGCGCAAGGAT
AGCACAGTACCCCTTTGACAAATACTTTGACCAGCAAGTTCGGGAGCTTG
AGGATAAGTCGGGGCCTATCTCTTCGGAGGCATTCGTGGCTCATGCGGTC
GATAAGAAAGACCCGCTGGTATCGTCTGACAATGGCGGCCCCCCTCCGCC
ACCTGTGCCTGGTCTTCTCAAAGGTATGCATCTAAATGGGCCTTATAAAA
TGTAACGATACTAACATTCCTAAAGCGCAGCATCAAGCTGCGCTAGCCGG
GGCGACCTCTGATGAGAGTACGCCACCGCACACCCCGGATACATCGCGGT
CATCCACCCCTGTTGCGAACCACATCATAACTGCCAAGGGGGGGCCAGCT
GGCCGAGTTTCACGTCGTGCACGCAAGGCCGCTAACGCCAGCGCCAATGC
TTCCTCAGGCGACGAAAACCGCAAAGGAAAGACACCCAAGAGCGGAAAAA
AGATGCGCAAGTGGGATGCCGATGGATTTGCCGATGAAGATGATGGTCAG
ATCCTCGACTACTCAGCCCATGCTGACGGTGAAGAAGCCGCTGCTCCAGC
TGTGGAAGGCGTGTCGCAAGATTCTTGGGGACGCAGAACTGGCAAGGGCC
AGTTCGTACTGAAAGATTTGGGAGACGAAGTTCACTCGATTTTGGAAAAT
GCAGAAAGCGACAAAGCAAAGGATGTGTCCTCTGCTGGTTTCGTCGGTTC
AGGTTTCAATGCCATTGGAGGTCTTCTACGTAATATCGTGGGCGGGAAGA
CCCTTACCGAAGCAGATTTGGAGAAGCCCTTGAAGACCATGGAAGATCAT
TTGTTGAGGAAGAACGTTGCACGCGAGGCCGCGGTCCGGCTGTGTGAGGG
TGTCCAGCGGGAGCTCGTGGGGAAAAAAACAGGCAATTTCCAAAGTGTGG
ATGCTGCTTTGCGCTCGGCCATGGAGTCATCTCTTCGGAAAATACTGACG
CCTACCTCCTCTCTTGATCTGCTCCGTGAAATCGATGCGGTTACGTCTCC
CACTAGCAAGCAGCAATCTCCTCGTCCTTATGTTATTTCGATCGTTGGTG
TCAACGGCGTTGGAAAGTCGACGAACTTGGGAAAGATTTGCTATTTTCTA
CTGCAGAACAAATACCGTGTTCTCATCGCCGCATGCGATACTTTCCGATC
TGGAGCTGTGGAACAGCTACGTGTTCATGCACGGAACCTCAGGGAACTCA
GTGCCCGCGAGAACGTTGGCGAGGTTGAGCTGTACGAGAAGGGTTACGGA
AAGGATGCAGCAAACGTGGCGAAGGATGCTGTCGAATACGGAGCTGCCAA
CCACTTCGATGTCGTCCTTATCGATACTGCCGGCCGCCGACACAACGACC
AGCGCCTCATGTCCTCGCTGGAGAAGTTTGCTAAATTTGCTAATCCAGAC
AAGATCTTCATGGTTGGCGAAGCCTTGGTTGGTACGGACAGTGTGATGCA
GGCTCGCAATTTCAACCAGGCCTTCGGTACTGGGCGGAACCTTGACGGCT
TCATCATCAGCAAATGTGATACAGTTGGTGACATGGTGGGGACGCTGGTC
AGCATGGTGCATGCTACAGGTATTCCCATTGTCTTCTTGGGAGTTGGTCA
GCATTATGGTGACCTGAGAGGACTCAGTGTCCCTTGGGCTGTCAATTTGT
TGATGAAGTGATTGGCGCGCAGCTTACATTAATATACTTCCGGCGAGTAA
TGAATATGACTACGATGAAGAACCATGAATTCCACACATAGGCTAGTCCA
AGCTACTCATAATCTTTAGTCGGGTCACAGTGTAGTGTCGCTTTGAAGAA
CGTACCTATCAGAAGCCATGATAATGGTTCCAGCAGAAGGCTACACGAGA
TGAACGTGCAGATCATCGGCAACGGGACAGTAGGCCAGAGCTTGGATGCG
GA
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Coding sequence (CDS) from alignment at ch3:3462397..3464798-

>KJC3_003928-T1 ID=KJC3_003928-T1|Name=KJC3_003928-T1|organism=Aspergillus niger KJC3|type=CDS|length=5823bp|location=Sequence derived from alignment at ch3:3462397..3464798- (Aspergillus niger KJC3)
CGCAGCATCAAGCTGCGCTAGCCGGGGCGACCTCTGATGAGAGTACGCCA
CCGCACACCCCGGATACATCGCGGTCATCCACCCCTGTTGCGAACCACAT
CATAACTGCCAAGGGGGGGCCAGCTGGCCGAGTTTCACGTCGTGCACGCA
AGGCCGCTAACGCCAGCGCCAATGCTTCCTCAGGCGACGAAAACCGCAAA
GGAAAGACACCCAAGAGCGGAAAAAAGATGCGCAAGTGGGATGCCGATGG
ATTTGCCGATGAAGATGATGGTCAGATCCTCGACTACTCAGCCCATGCTG
ACGGTGAAGAAGCCGCTGCTCCAGCTGTGGAAGGCGTGTCGCAAGATTCT
TGGGGACGCAGAACTGGCAAGGGCCAGTTCGTACTGAAAGATTTGGGAGA
CGAAGTTCACTCGATTTTGGAAAATGCAGAAAGCGACAAAGCAAAGGATG
TGTCCTCTGCTGGTTTCGTCGGTTCAGGTTTCAATGCCATTGGAGGTCTT
CTACGTAATATCGTGGGCGGGAAGACCCTTACCGAAGCAGATTTGGAGAA
GCCCTTGAAGACCATGGAAGATCATTTGTTGAGGAAGAACGTTGCACGCG
AGGCCGCGGTCCGGCTGTGTGAGGGTGTCCAGCGGGAGCTCGTGGGGAAA
AAAACAGGCAATTTCCAAAGTGTGGATGCTGCTTTGCGCTCGGCCATGGA
GTCATCTCTTCGGAAAATACTGACGCCTACCTCCTCTCTTGATCTGCTCC
GTGAAATCGATGCGGTTACGTCTCCCACTAGCAAGCAGCAATCTCCTCGT
CCTTATGTTATTTCGATCGTTGGTGTCAACGGCGTTGGAAAGTCGACGAA
CTTGGGAAAGATTTGCTATTTTCTACTGCAGAACAAATACCGTGTTCTCA
TCGCCGCATGCGATACTTTCCGATCTGGAGCTGTGGAACAGCTACGTGTT
CATGCACGGAACCTCAGGGAACTCAGTGCCCGCGAGAACGTTGGCGAGGT
TGAGCTGTACGAGAAGGGTTACGGAAAGGATGCAGCAAACGTGGCGAAGG
ATGCTGTCGAATACGGAGCTGCCAACCACTTCGATGTCGTCCTTATCGAT
ACTGCCGGCCGCCGACACAACGACCAGCGCCTCATGTCCTCGCTGGAGAA
GTTTGCTAAATTTGCTAATCCAGACAAGATCTTCATGGTTGGCGAAGCCT
TGGTTGGTACGGACAGTGTGATGCAGGCTCGCAATTTCAACCAGGCCTTC
GGTACTGGGCGGAACCTTGACGGCTTCATCATCAGCAAATGTGATACAGT
TGGTGACATGGTGGGGACGCTGGTCAGCATGGTGCATGCTACAGGTATTC
CCATTGTCTTCTTGGGAGTTGGTCAGCATTATGGTGACCTGAGAGGACTC
AGTGTCCCTTGGGCTGTCAATTTGTTGATGAAGTGAGCCGTCTATCAGTC
TCTCTTACAGCTTGGTTGGATCGACAAACTCCTGGACAACATTTCCACCC
TGTACATCGATTTGTACAAGGATCAATTACGAAGTACTCGCGCAAGGATA
GCACAGTACCCCTTTGACAAATACTTTGACCAGCAAGTTCGGGAGCTTGA
GGATAAGTCGGGGCCTATCTCTTCGGAGGCATTCGTGGCTCATGCGGTCG
ATAAGAAAGACCCGCTGGTATCGTCTGACAATGGCGGCCCCCCTCCGCCA
CCTGTGCCTGGTCTTCTCAAAGATGTTGGAAGCATTCGAGATCTTGACTG
CCTCAGGGGTAGTCCTGTGGTCGAAATCGTACGCGCCCGTCGGGGCGCAT
ATTGTTAACAGCCTTATCAATGATGTCTTCATCGAGGAGAAGGTCCAGCT
TCAGGCAACGAACAATGCTGCCCCTTCGTTCAAGAAAGAGAAGTACACTC
TAAAGTGGAAAAGAGTGAAGGAATTCGACTTGATCTTTGTGCGCAGCATC
AAGCTGCGCTAGCCGGGGCGACCTCTGATGAGAGTACGCCACCGCACACC
CCGGATACATCGCGGTCATCCACCCCTGTTGCGAACCACATCATAACTGC
CAAGGGGGGGCCAGCTGGCCGAGTTTCACGTCGTGCACGCAAGGCCGCTA
ACGCCAGCGCCAATGCTTCCTCAGGCGACGAAAACCGCAAAGGAAAGACA
CCCAAGAGCGGAAAAAAGATGCGCAAGTGGGATGCCGATGGATTTGCCGA
TGAAGATGATGGTCAGATCCTCGACTACTCAGCCCATGCTGACGGTGAAG
AAGCCGCTGCTCCAGCTGTGGAAGGCGTGTCGCAAGATTCTTGGGGACGC
AGAACTGGCAAGGGCCAGTTCGTACTGAAAGATTTGGGAGACGAAGTTCA
CTCGATTTTGGAAAATGCAGAAAGCGACAAAGCAAAGGATGTGTCCTCTG
CTGGTTTCGTCGGTTCAGGTTTCAATGCCATTGGAGGTCTTCTACGTAAT
ATCGTGGGCGGGAAGACCCTTACCGAAGCAGATTTGGAGAAGCCCTTGAA
GACCATGGAAGATCATTTGTTGAGGAAGAACGTTGCACGCGAGGCCGCGG
TCCGGCTGTGTGAGGGTGTCCAGCGGGAGCTCGTGGGGAAAAAAACAGGC
AATTTCCAAAGTGTGGATGCTGCTTTGCGCTCGGCCATGGAGTCATCTCT
TCGGAAAATACTGACGCCTACCTCCTCTCTTGATCTGCTCCGTGAAATCG
ATGCGGTTACGTCTCCCACTAGCAAGCAGCAATCTCCTCGTCCTTATGTT
ATTTCGATCGTTGGTGTCAACGGCGTTGGAAAGTCGACGAACTTGGGAAA
GATTTGCTATTTTCTACTGCAGAACAAATACCGTGTTCTCATCGCCGCAT
GCGATACTTTCCGATCTGGAGCTGTGGAACAGCTACGTGTTCATGCACGG
AACCTCAGGGAACTCAGTGCCCGCGAGAACGTTGGCGAGGTTGAGCTGTA
CGAGAAGGGTTACGGAAAGGATGCAGCAAACGTGGCGAAGGATGCTGTCG
AATACGGAGCTGCCAACCACTTCGATGTCGTCCTTATCGATACTGCCGGC
CGCCGACACAACGACCAGCGCCTCATGTCCTCGCTGGAGAAGTTTGCTAA
ATTTGCTAATCCAGACAAGATCTTCATGGTTGGCGAAGCCTTGGTTGGTA
CGGACAGTGTGATGCAGGCTCGCAATTTCAACCAGGCCTTCGGTACTGGG
CGGAACCTTGACGGCTTCATCATCAGCAAATGTGATACAGTTGGTGACAT
GGTGGGGACGCTGGTCAGCATGGTGCATGCTACAGGTATTCCCATTGTCT
TCTTGGGAGTTGGTCAGCATTATGGTGACCTGAGAGGACTCAGTGTCCCT
TGGGCTGTCAATTTGTTGATGAAGTGAGCCGTCTATCAGTCTCTCTTACA
GCTTGGTTGGATCGACAAACTCCTGGACAACATTTCCACCCTGTACATCG
ATTTGTACAAGGATCAATTACGAAGTACTCGCGCAAGGATAGCACAGTAC
CCCTTTGACAAATACTTTGACCAGCAAGTTCGGGAGCTTGAGGATAAGTC
GGGGCCTATCTCTTCGGAGGCATTCGTGGCTCATGCGGTCGATAAGAAAG
ACCCGCTGGTATCGTCTGACAATGGCGGCCCCCCTCCGCCACCTGTGCCT
GGTCTTCTCAAAGATGTTGGAAGCATTCGAGATCTTGACTGCCTCAGGGG
TAGTCCTGTGGTCGAAATCGTACGCGCCCGTCGGGGCGCATATTGTTAAC
AGCCTTATCAATGATGTCTTCATCGAGGAGAAGGTCCAGCTTCAGGCAAC
GAACAATGCTGCCCCTTCGTTCAAGAAAGAGAAGTACACTCTAAAGTGGA
AAAGAGTGAAGGAATTCGACTTGATCTTTGTGCGCAGCATCAAGCTGCGC
TAGCCGGGGCGACCTCTGATGAGAGTACGCCACCGCACACCCCGGATACA
TCGCGGTCATCCACCCCTGTTGCGAACCACATCATAACTGCCAAGGGGGG
GCCAGCTGGCCGAGTTTCACGTCGTGCACGCAAGGCCGCTAACGCCAGCG
CCAATGCTTCCTCAGGCGACGAAAACCGCAAAGGAAAGACACCCAAGAGC
GGAAAAAAGATGCGCAAGTGGGATGCCGATGGATTTGCCGATGAAGATGA
TGGTCAGATCCTCGACTACTCAGCCCATGCTGACGGTGAAGAAGCCGCTG
CTCCAGCTGTGGAAGGCGTGTCGCAAGATTCTTGGGGACGCAGAACTGGC
AAGGGCCAGTTCGTACTGAAAGATTTGGGAGACGAAGTTCACTCGATTTT
GGAAAATGCAGAAAGCGACAAAGCAAAGGATGTGTCCTCTGCTGGTTTCG
TCGGTTCAGGTTTCAATGCCATTGGAGGTCTTCTACGTAATATCGTGGGC
GGGAAGACCCTTACCGAAGCAGATTTGGAGAAGCCCTTGAAGACCATGGA
AGATCATTTGTTGAGGAAGAACGTTGCACGCGAGGCCGCGGTCCGGCTGT
GTGAGGGTGTCCAGCGGGAGCTCGTGGGGAAAAAAACAGGCAATTTCCAA
AGTGTGGATGCTGCTTTGCGCTCGGCCATGGAGTCATCTCTTCGGAAAAT
ACTGACGCCTACCTCCTCTCTTGATCTGCTCCGTGAAATCGATGCGGTTA
CGTCTCCCACTAGCAAGCAGCAATCTCCTCGTCCTTATGTTATTTCGATC
GTTGGTGTCAACGGCGTTGGAAAGTCGACGAACTTGGGAAAGATTTGCTA
TTTTCTACTGCAGAACAAATACCGTGTTCTCATCGCCGCATGCGATACTT
TCCGATCTGGAGCTGTGGAACAGCTACGTGTTCATGCACGGAACCTCAGG
GAACTCAGTGCCCGCGAGAACGTTGGCGAGGTTGAGCTGTACGAGAAGGG
TTACGGAAAGGATGCAGCAAACGTGGCGAAGGATGCTGTCGAATACGGAG
CTGCCAACCACTTCGATGTCGTCCTTATCGATACTGCCGGCCGCCGACAC
AACGACCAGCGCCTCATGTCCTCGCTGGAGAAGTTTGCTAAATTTGCTAA
TCCAGACAAGATCTTCATGGTTGGCGAAGCCTTGGTTGGTACGGACAGTG
TGATGCAGGCTCGCAATTTCAACCAGGCCTTCGGTACTGGGCGGAACCTT
GACGGCTTCATCATCAGCAAATGTGATACAGTTGGTGACATGGTGGGGAC
GCTGGTCAGCATGGTGCATGCTACAGGTATTCCCATTGTCTTCTTGGGAG
TTGGTCAGCATTATGGTGACCTGAGAGGACTCAGTGTCCCTTGGGCTGTC
AATTTGTTGATGAAGTGAGCCGTCTATCAGTCTCTCTTACAGCTTGGTTG
GATCGACAAACTCCTGGACAACATTTCCACCCTGTACATCGATTTGTACA
AGGATCAATTACGAAGTACTCGCGCAAGGATAGCACAGTACCCCTTTGAC
AAATACTTTGACCAGCAAGTTCGGGAGCTTGAGGATAAGTCGGGGCCTAT
CTCTTCGGAGGCATTCGTGGCTCATGCGGTCGATAAGAAAGACCCGCTGG
TATCGTCTGACAATGGCGGCCCCCCTCCGCCACCTGTGCCTGGTCTTCTC
AAAGATGTTGGAAGCATTCGAGATCTTGACTGCCTCAGGGGTAGTCCTGT
GGTCGAAATCGTACGCGCCCGTCGGGGCGCATATTGTTAACAGCCTTATC
AATGATGTCTTCATCGAGGAGAAGGTCCAGCTTCAGGCAACGAACAATGC
TGCCCCTTCGTTCAAGAAAGAGAAGTACACTCTAAAGTGGAAAAGAGTGA
AGGAATTCGACTTGATCTTTGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005785signal recognition particle receptor complex
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005047signal recognition particle binding
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003928KJC3_003928Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003928-T1KJC3_003928-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003928-T1.cdsKJC3_003928-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003928-T1.utr3p1KJC3_003928-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003928-T1.exon3KJC3_003928-T1.exon3Aspergillus niger KJC3exon
KJC3_003928-T1.exon2KJC3_003928-T1.exon2Aspergillus niger KJC3exon
KJC3_003928-T1.exon1KJC3_003928-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003928-T1.utr5p1KJC3_003928-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011012
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR036225
DBxrefInterPro:IPR007222
DBxrefInterPro:IPR042101
DBxrefInterPro:IPR013822
DBxrefInterPro:IPR000897
DBxrefInterPro:IPR003593
DBxrefPFAM:PF02881
DBxrefPFAM:PF00448
DBxrefPFAM:PF04086
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3462397..3464798 -
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