|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3467541..3468251+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003930-T1 ID=KJC3_003930-T1|Name=KJC3_003930-T1|organism=Aspergillus niger KJC3|type=mRNA|length=711bp|location=Sequence derived from alignment at ch3:3467541..3468251+ (Aspergillus niger KJC3)
ATGGCCGATATCGATGTTCAGGTTGCTCAATGGAAGCTGGTTGAGGTTGG
CCGCGTTGTGCTGATCCGCAGCGGTCCTTACACCGGCAAGCTCGCTGCCA
TTGTTGAGATTGTCGACCACAAGCGTGTACGTTTTTGCGCATATACCGGA
GTTGCTACGAGCGCGAAGGAATGGGATTTCTATTAGGAGGAAATGCGATA
TTGACAAAGAGTTCCACCGATTAGGTCTTGGTCGACGGTCCCTCCACCGA
GGAGCAGAAGATCGTTCCCCGCCACGTCCTTCCTCTCTCCCACGCCACCC
TCACTCACTTTGTCATCCCCCGTTTGCCCCGTGCTGCCGGTACTGGCCCC
GTGAAGAAGCTTTGGCAGAAGGAGGAGATCGATGGCAAGTGGGCCAAGTC
CAACTTCGCCCAGAAGACCGAGCGCGCTGAGCGCAGGAAGAACCTGTCCG
ACTTCGAGCGCTTCAAGGTCCTCCGCCTCCGGAAGCAGGTACGTTTGCGA
ATCGCGATGATGTGACATGCACGGAAGATTGGGTTATATGGAGAAATCAT
ATGAAAGTGGTCGGGACTATTGGTCGATTACTGGAAAAGAGCCGGGGACA
CTATGTGCATGGAGATTGCAGGAATAGGTGCTGACATTTTGGATTCAACA
GGCTCGCTACGAGGTCCAGAAGGCTCACGCTAAGCTCAGGGCGGCTGCTC
CTAAGTCATAG back to topCoding sequence (CDS) from alignment at ch3:3467541..3468251+ >KJC3_003930-T1 ID=KJC3_003930-T1|Name=KJC3_003930-T1|organism=Aspergillus niger KJC3|type=CDS|length=1350bp|location=Sequence derived from alignment at ch3:3467541..3468251+ (Aspergillus niger KJC3)
ATGGCCGATATCGATGTTCAGGTTGCTCAATGGAAGCTGGTTGAGGTTGG
CCGCGTTGTGCTGATCCGCAGCGGTCCTTACACCGGCAAGCTCGCTGCCA
TTGTTGAGATTGTCGACCACAAGCGTGTCTTGGTCGACGGTCCCTCCACC
GAGGAGCAGAAGATCGTTCCCCGCCACGTCCTTCCTCTCTCCCACGCCAC
CCTCACTCACTTTGTCATCCCCCGTTTGCCCCGTGCTGCCGGTACTGGCC
CCGTGAAGAAGCTTTGGCAGAAGGAGGAGATCGATGGCAAGTGGGCCAAG
TCCAACTTCGCCCAGAAGACCGAGCGCGCTGAGCGCAGGAAGAACCTGTC
CGACTTCGAGCGCTTCAAGGTCCTCCGCCTCCGGAAGCAGGCTCGCTACG
AGGTCCAGAAGGCTCACGCTAAGCTCAGGGCGGCTGCTCCTAAGTCATAG
ATGGCCGATATCGATGTTCAGGTTGCTCAATGGAAGCTGGTTGAGGTTGG
CCGCGTTGTGCTGATCCGCAGCGGTCCTTACACCGGCAAGCTCGCTGCCA
TTGTTGAGATTGTCGACCACAAGCGTGTCTTGGTCGACGGTCCCTCCACC
GAGGAGCAGAAGATCGTTCCCCGCCACGTCCTTCCTCTCTCCCACGCCAC
CCTCACTCACTTTGTCATCCCCCGTTTGCCCCGTGCTGCCGGTACTGGCC
CCGTGAAGAAGCTTTGGCAGAAGGAGGAGATCGATGGCAAGTGGGCCAAG
TCCAACTTCGCCCAGAAGACCGAGCGCGCTGAGCGCAGGAAGAACCTGTC
CGACTTCGAGCGCTTCAAGGTCCTCCGCCTCCGGAAGCAGGCTCGCTACG
AGGTCCAGAAGGCTCACGCTAAGCTCAGGGCGGCTGCTCCTAAGTCATAG
ATGGCCGATATCGATGTTCAGGTTGCTCAATGGAAGCTGGTTGAGGTTGG
CCGCGTTGTGCTGATCCGCAGCGGTCCTTACACCGGCAAGCTCGCTGCCA
TTGTTGAGATTGTCGACCACAAGCGTGTCTTGGTCGACGGTCCCTCCACC
GAGGAGCAGAAGATCGTTCCCCGCCACGTCCTTCCTCTCTCCCACGCCAC
CCTCACTCACTTTGTCATCCCCCGTTTGCCCCGTGCTGCCGGTACTGGCC
CCGTGAAGAAGCTTTGGCAGAAGGAGGAGATCGATGGCAAGTGGGCCAAG
TCCAACTTCGCCCAGAAGACCGAGCGCGCTGAGCGCAGGAAGAACCTGTC
CGACTTCGAGCGCTTCAAGGTCCTCCGCCTCCGGAAGCAGGCTCGCTACG
AGGTCCAGAAGGCTCACGCTAAGCTCAGGGCGGCTGCTCCTAAGTCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265BWR |
| DBxref | InterPro:IPR008991 |
| DBxref | InterPro:IPR041985 |
| DBxref | InterPro:IPR014722 |
| DBxref | InterPro:IPR002784 |
| DBxref | InterPro:IPR005824 |
| DBxref | PFAM:PF01929 |
| DBxref | PFAM:PF00467 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3467541..3468251 + |
|
