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KJC3_003932-T1, KJC3_003932-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003932-T1
Unique NameKJC3_003932-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3470243..3471296+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003932-T1 ID=KJC3_003932-T1|Name=KJC3_003932-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1054bp|location=Sequence derived from alignment at ch3:3470243..3471296+ (Aspergillus niger KJC3)
CGTTGAACTCCCCTCTCTCCCCCAACCTTCTCCGTTCCACATCTCAAAAT
GGCCACTGTATGTGGGGTTCCTGTTTTTGTCATAAAATTGTCTCGGATGG
CGAGAGATATGTGTCAGCTAACTGCTTGGTGTACAGCGTAGCGCCGCTCT
CAAGGTCGACTGGGCCAAGTTGACCAGCTCCCTCGGACTCCGCGGCCAGA
CCGCTGCTTCCCTCCAGGCCTTCAAGAAGCGTAACGACGATGCGCGCCGC
AAGGTTCAGATCCTGTCTGAGCAGGCCCAGACTGTCGACTTCGAGCACTA
CCGCAAGGTCCTGAAGAACCAGGCCATCGTCAACGAGATCGAGAACCACT
TCAAGAACTTCAAGCCCGCCACCTACGATGTCAGCCGCCAGCTGAAGGCC
ATCGATGCTTTCGAGGCCCAGGCCGTCAAGGGCGCTGAGGAGACCAAGGG
CAAGGTTGAGTCCGAGCTCCGCAGTCTCCAGAAGACCCTCGAGAACATTG
AGACCGCCCGTCCCTTCGAGGACCTCACTGTTGTATGTTATGGTGTCCCA
GGATTGGACTACGCAGGATCTTGGTACAGATTTATTAATGTCTCTTTTTC
TTTTCCTTTTAGGATGAGGTTGCCGCCGCTCAGCCCGAGATCGACGAGAA
GACCGCCTCCCTTGTCTCCAAGGGCAGATGGATGCCGGCTGGTTACAAGG
TGCGTAATACAATACCTGCATTAATGCCTAACTCTGCGACGAGTAAAACT
AATGGATGTTGGAATTATAGGAGCGCTTCGGCGACATGTCCGTTGTTTAA
ACGGTTACATCTTTTGTACCTATTTTACGTCTCTCCGTCCTTCGACCAGT
ATAATCACACGAAGTTACCCTTTGTTGTCAAGCATGTTGGCCAGTTAGGA
TACCCTTGCTCTCTGGCAGTGTGATGTCGGTTGTAGGGTCATGTATAGAA
ACAATGTTGAATTTAGATGGTTCCCTCACCAACCGGACCGTTTTTGTATA
TCGGCCCTCGACCGCTATGTTACGCTCCATATAAAGCAGTCGACTATATT
TACC
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Coding sequence (CDS) from alignment at ch3:3470243..3471296+

>KJC3_003932-T1 ID=KJC3_003932-T1|Name=KJC3_003932-T1|organism=Aspergillus niger KJC3|type=CDS|length=2088bp|location=Sequence derived from alignment at ch3:3470243..3471296+ (Aspergillus niger KJC3)
ATGGCCACTCGTAGCGCCGCTCTCAAGGTCGACTGGGCCAAGTTGACCAG
CTCCCTCGGACTCCGCGGCCAGACCGCTGCTTCCCTCCAGGCCTTCAAGA
AGCGTAACGACGATGCGCGCCGCAAGGTTCAGATCCTGTCTGAGCAGGCC
CAGACTGTCGACTTCGAGCACTACCGCAAGGTCCTGAAGAACCAGGCCAT
CGTCAACGAGATCGAGAACCACTTCAAGAACTTCAAGCCCGCCACCTACG
ATGTCAGCCGCCAGCTGAAGGCCATCGATGCTTTCGAGGCCCAGGCCGTC
AAGGGCGCTGAGGAGACCAAGGGCAAGGTTGAGTCCGAGCTCCGCAGTCT
CCAGAAGACCCTCGAGAACATTGAGACCGCCCGTCCCTTCGAGGACCTCA
CTGTTGATGAGGTTGCCGCCGCTCAGCCCGAGATCGACGAGAAGACCGCC
TCCCTTGTCTCCAAGGGCAGATGGATGCCGGCTGGTTACAAGGAGCGCTT
CGGCGACATGTCCGTTGTTTAAATGGCCACTCGTAGCGCCGCTCTCAAGG
TCGACTGGGCCAAGTTGACCAGCTCCCTCGGACTCCGCGGCCAGACCGCT
GCTTCCCTCCAGGCCTTCAAGAAGCGTAACGACGATGCGCGCCGCAAGGT
TCAGATCCTGTCTGAGCAGGCCCAGACTGTCGACTTCGAGCACTACCGCA
AGGTCCTGAAGAACCAGGCCATCGTCAACGAGATCGAGAACCACTTCAAG
AACTTCAAGCCCGCCACCTACGATGTCAGCCGCCAGCTGAAGGCCATCGA
TGCTTTCGAGGCCCAGGCCGTCAAGGGCGCTGAGGAGACCAAGGGCAAGG
TTGAGTCCGAGCTCCGCAGTCTCCAGAAGACCCTCGAGAACATTGAGACC
GCCCGTCCCTTCGAGGACCTCACTGTTGATGAGGTTGCCGCCGCTCAGCC
CGAGATCGACGAGAAGACCGCCTCCCTTGTCTCCAAGGGCAGATGGATGC
CGGCTGGTTACAAGGAGCGCTTCGGCGACATGTCCGTTGTTTAAATGGCC
ACTCGTAGCGCCGCTCTCAAGGTCGACTGGGCCAAGTTGACCAGCTCCCT
CGGACTCCGCGGCCAGACCGCTGCTTCCCTCCAGGCCTTCAAGAAGCGTA
ACGACGATGCGCGCCGCAAGGTTCAGATCCTGTCTGAGCAGGCCCAGACT
GTCGACTTCGAGCACTACCGCAAGGTCCTGAAGAACCAGGCCATCGTCAA
CGAGATCGAGAACCACTTCAAGAACTTCAAGCCCGCCACCTACGATGTCA
GCCGCCAGCTGAAGGCCATCGATGCTTTCGAGGCCCAGGCCGTCAAGGGC
GCTGAGGAGACCAAGGGCAAGGTTGAGTCCGAGCTCCGCAGTCTCCAGAA
GACCCTCGAGAACATTGAGACCGCCCGTCCCTTCGAGGACCTCACTGTTG
ATGAGGTTGCCGCCGCTCAGCCCGAGATCGACGAGAAGACCGCCTCCCTT
GTCTCCAAGGGCAGATGGATGCCGGCTGGTTACAAGGAGCGCTTCGGCGA
CATGTCCGTTGTTTAAATGGCCACTCGTAGCGCCGCTCTCAAGGTCGACT
GGGCCAAGTTGACCAGCTCCCTCGGACTCCGCGGCCAGACCGCTGCTTCC
CTCCAGGCCTTCAAGAAGCGTAACGACGATGCGCGCCGCAAGGTTCAGAT
CCTGTCTGAGCAGGCCCAGACTGTCGACTTCGAGCACTACCGCAAGGTCC
TGAAGAACCAGGCCATCGTCAACGAGATCGAGAACCACTTCAAGAACTTC
AAGCCCGCCACCTACGATGTCAGCCGCCAGCTGAAGGCCATCGATGCTTT
CGAGGCCCAGGCCGTCAAGGGCGCTGAGGAGACCAAGGGCAAGGTTGAGT
CCGAGCTCCGCAGTCTCCAGAAGACCCTCGAGAACATTGAGACCGCCCGT
CCCTTCGAGGACCTCACTGTTGATGAGGTTGCCGCCGCTCAGCCCGAGAT
CGACGAGAAGACCGCCTCCCTTGTCTCCAAGGGCAGATGGATGCCGGCTG
GTTACAAGGAGCGCTTCGGCGACATGTCCGTTGTTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000276mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
Vocabulary: Molecular Function
TermDefinition
GO:0015078proton transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATP7KJC3_003932Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003932-T1KJC3_003932-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003932-T1.utr5p1KJC3_003932-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003932-T1.exon1KJC3_003932-T1.exon1Aspergillus niger KJC3exon
KJC3_003932-T1.exon2KJC3_003932-T1.exon2Aspergillus niger KJC3exon
KJC3_003932-T1.exon3KJC3_003932-T1.exon3Aspergillus niger KJC3exon
KJC3_003932-T1.exon4KJC3_003932-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003932-T1.cdsKJC3_003932-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003932-T1.utr3p1KJC3_003932-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036228
DBxrefInterPro:IPR008689
DBxrefPFAM:PF05873
ProductATP synthase d subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3470243..3471296 +
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