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KJC3_003933-T1, KJC3_003933-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003933-T1
Unique NameKJC3_003933-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3471452..3473609+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003933-T1 ID=KJC3_003933-T1|Name=KJC3_003933-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2158bp|location=Sequence derived from alignment at ch3:3471452..3473609+ (Aspergillus niger KJC3)
CTCTGGTTTGCTCCCCATATTTTCCCCAGTCTCAAGGACGAGTTCCTTCC
GATCGAATTGCTGTTCGGTCTTGATTGCCGCATTGAGCAAATAGTTTGTT
TGTCATGGTCGTAGTTTGCAAGGCTCTGGGATTAGACTCGAGACTTAGCC
GATCCCGAACAGCCTAAACTCTCTGCGCGAACACGACACAGGGGATCCTG
CACTTCATGGCTGGCTCTGGATTGCACATCCACGTCGTGATGGATCAATT
ATGAGCCACAAAGCCAAATCATCAAAGTCAGAGGCTTAAGTTTACTGACT
GCGAACCTATTTGTTATCGGTTCAATCAAATTACGATCTCCACTCTGACA
GATTCGCGCCCCTATTTTTGCTTCGCCAGGAACTCAGCTGGGAAACTGGA
TGGTCTAGACCATAATTTGATGACCACTAAACACCGATGGTCCTGTCAAA
CTACAAGTACTTAAGTTCAGGATGGTAAGCTTATCGCCAATGAATGTTGA
AGCTCAGGCCATCCTCTCGAAGTGCCGTCCCTCAAGACTCTATATTATAT
ATCCCTCCAGTATACGGATAATTACTAGTTGAAAGGCCATTAGTATTCAG
TTCACAATGCCTAACGTCTCGCAGCCGGCCCTTGCCGGATTATCAGCACT
CGAAAGACTACCGGTGGAAATCATCCAAGAAATCTTCCTCCACTGTCTCG
AAGTTAATCTCCCGCGAGCCTCCATACACATCTCCCGGGCTCTTTCCAAC
ACAGTCCTGTACACATGGGTCACTCGCTATGTCTTCAGCAGCACCAACGA
AAGCTCAAGACAAGACTTCTTCACGCCTGATTTTCTTCCCTGGCCTCTTG
ATGTTTTTGCACTCTCTCCCAATGAAAGGAGAGACCTGCAAAACGTCATC
CTCAGTTGTCGCTGGTGTACACTACCTTTGATCCGCAAATGCCAGAGGGA
ATACATAGAGCATACGATCCGCCGCAAATGTCTGCAGCTAGACTTATCAC
CTGGAGACCGCCAGGTCCTCATCAATATTGGCGAGCAATTCGACAAAGAT
TTACCTCTTATGCCTGATGAAACACCCCATGCTCATCGCGGAAAAGGCGA
CCTGATCCTCAAAGCCAAAATCCCAAAGTCAGATGTGGACTGCAAAGTTG
CAGTGTGGTTCAATGCTGGCGCGGTCCAGATCCGTCCATCCAGCGAGATA
TACCAGGAGACTGACATCTTCCGCCTACCATGCTTCGCGGCCAATCTACC
AGTTCGGGTCCCGGACAAGCTACTTTTTCCTCCATGGACTGAATCTAAGC
TGGACTTCCTCGAGTTGCTCTCGATGGACGGCTATCTTGACGAGGATCCC
GAGCATCCGCGGGCGAAGCGGATCCTTCGACAGACGATTCGAGACCGTGA
CCTCGCAACGTTTAAGCGATTGCTGAGCATGCGTATTCGTGTGCCGTGGT
ACAAGTACCCCATTCGGTGGCCGGTTCTTCCAAATCACTTCTACGTGGCT
TTGAAGTATGCGGATGAGGTGAAGGACCCTTTCGTCAGGTTGCTGGTGAG
TCAGCGATGGGAGGATATCCCATCCGACGACTTTCAGCTCAAGGATCAAT
TGATGGCTAAACTTGGGACAGGCATCTCGGGATAAGTTGCCAGGATGACC
TCAGTCCGCAGGACCCACACGATATACCCAACTACGGGGTACACCCAATT
TACTTCGACTCTTATAGTTTGGTGAAAATTTCATTGCTCGAAATGGAAAC
ACAGGATATCAGGCAGGACACAAAGGACGAGAAGGAAACGCAAGGAACCA
CAAAAACTCCGAACTGATATCCACATTCATATCCATATCCGTCATAACTT
CATGGCGATTAAGTCAAGGTCTTGGTCGAGGTCGGGCATGTCTCGTATCG
ATCAATGTCAGACTCTTGACCTTCGCGTTCTTCTCCTCCTCCCACCACAG
GATCCGCAGGTCAGACACGAGATAATCACGTCGAAGAGGGTAACGACACC
GTCGATGATGGCCTTGCAGACAGCACCGATTGTGTTGACGATGCCCATCA
GGCAAGCGCCGATGGCGTGGAAGATACTAGTGATCTATATATACATGTGT
TAGCCAATCACCAGTTCATTTGTTCATAATATAAAGCAAGAGAAGACGAT
AAAAGAAG
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Coding sequence (CDS) from alignment at ch3:3471452..3473609+

>KJC3_003933-T1 ID=KJC3_003933-T1|Name=KJC3_003933-T1|organism=Aspergillus niger KJC3|type=CDS|length=2853bp|location=Sequence derived from alignment at ch3:3471452..3473609+ (Aspergillus niger KJC3)
ATGCCGGCCCTTGCCGGATTATCAGCACTCGAAAGACTACCGGTGGAAAT
CATCCAAGAAATCTTCCTCCACTGTCTCGAAGTTAATCTCCCGCGAGCCT
CCATACACATCTCCCGGGCTCTTTCCAACACAGTCCTGTACACATGGGTC
ACTCGCTATGTCTTCAGCAGCACCAACGAAAGCTCAAGACAAGACTTCTT
CACGCCTGATTTTCTTCCCTGGCCTCTTGATGTTTTTGCACTCTCTCCCA
ATGAAAGGAGAGACCTGCAAAACGTCATCCTCAGTTGTCGCTGGTGTACA
CTACCTTTGATCCGCAAATGCCAGAGGGAATACATAGAGCATACGATCCG
CCGCAAATGTCTGCAGCTAGACTTATCACCTGGAGACCGCCAGGTCCTCA
TCAATATTGGCGAGCAATTCGACAAAGATTTACCTCTTATGCCTGATGAA
ACACCCCATGCTCATCGCGGAAAAGGCGACCTGATCCTCAAAGCCAAAAT
CCCAAAGTCAGATGTGGACTGCAAAGTTGCAGTGTGGTTCAATGCTGGCG
CGGTCCAGATCCGTCCATCCAGCGAGATATACCAGGAGACTGACATCTTC
CGCCTACCATGCTTCGCGGCCAATCTACCAGTTCGGGTCCCGGACAAGCT
ACTTTTTCCTCCATGGACTGAATCTAAGCTGGACTTCCTCGAGTTGCTCT
CGATGGACGGCTATCTTGACGAGGATCCCGAGCATCCGCGGGCGAAGCGG
ATCCTTCGACAGACGATTCGAGACCGTGACCTCGCAACGTTTAAGCGATT
GCTGAGCATGCGTATTCGTGTGCCGTGGTACAAGTACCCCATTCGGTGGC
CGGTTCTTCCAAATCACTTCTACGTGGCTTTGAAGTATGCGGATGAGGTG
AAGGACCCTTTCGTCAGGTTGCTGGCATCTCGGGATAAGTTGCCAGGATG
AATGCCGGCCCTTGCCGGATTATCAGCACTCGAAAGACTACCGGTGGAAA
TCATCCAAGAAATCTTCCTCCACTGTCTCGAAGTTAATCTCCCGCGAGCC
TCCATACACATCTCCCGGGCTCTTTCCAACACAGTCCTGTACACATGGGT
CACTCGCTATGTCTTCAGCAGCACCAACGAAAGCTCAAGACAAGACTTCT
TCACGCCTGATTTTCTTCCCTGGCCTCTTGATGTTTTTGCACTCTCTCCC
AATGAAAGGAGAGACCTGCAAAACGTCATCCTCAGTTGTCGCTGGTGTAC
ACTACCTTTGATCCGCAAATGCCAGAGGGAATACATAGAGCATACGATCC
GCCGCAAATGTCTGCAGCTAGACTTATCACCTGGAGACCGCCAGGTCCTC
ATCAATATTGGCGAGCAATTCGACAAAGATTTACCTCTTATGCCTGATGA
AACACCCCATGCTCATCGCGGAAAAGGCGACCTGATCCTCAAAGCCAAAA
TCCCAAAGTCAGATGTGGACTGCAAAGTTGCAGTGTGGTTCAATGCTGGC
GCGGTCCAGATCCGTCCATCCAGCGAGATATACCAGGAGACTGACATCTT
CCGCCTACCATGCTTCGCGGCCAATCTACCAGTTCGGGTCCCGGACAAGC
TACTTTTTCCTCCATGGACTGAATCTAAGCTGGACTTCCTCGAGTTGCTC
TCGATGGACGGCTATCTTGACGAGGATCCCGAGCATCCGCGGGCGAAGCG
GATCCTTCGACAGACGATTCGAGACCGTGACCTCGCAACGTTTAAGCGAT
TGCTGAGCATGCGTATTCGTGTGCCGTGGTACAAGTACCCCATTCGGTGG
CCGGTTCTTCCAAATCACTTCTACGTGGCTTTGAAGTATGCGGATGAGGT
GAAGGACCCTTTCGTCAGGTTGCTGGCATCTCGGGATAAGTTGCCAGGAT
GAATGCCGGCCCTTGCCGGATTATCAGCACTCGAAAGACTACCGGTGGAA
ATCATCCAAGAAATCTTCCTCCACTGTCTCGAAGTTAATCTCCCGCGAGC
CTCCATACACATCTCCCGGGCTCTTTCCAACACAGTCCTGTACACATGGG
TCACTCGCTATGTCTTCAGCAGCACCAACGAAAGCTCAAGACAAGACTTC
TTCACGCCTGATTTTCTTCCCTGGCCTCTTGATGTTTTTGCACTCTCTCC
CAATGAAAGGAGAGACCTGCAAAACGTCATCCTCAGTTGTCGCTGGTGTA
CACTACCTTTGATCCGCAAATGCCAGAGGGAATACATAGAGCATACGATC
CGCCGCAAATGTCTGCAGCTAGACTTATCACCTGGAGACCGCCAGGTCCT
CATCAATATTGGCGAGCAATTCGACAAAGATTTACCTCTTATGCCTGATG
AAACACCCCATGCTCATCGCGGAAAAGGCGACCTGATCCTCAAAGCCAAA
ATCCCAAAGTCAGATGTGGACTGCAAAGTTGCAGTGTGGTTCAATGCTGG
CGCGGTCCAGATCCGTCCATCCAGCGAGATATACCAGGAGACTGACATCT
TCCGCCTACCATGCTTCGCGGCCAATCTACCAGTTCGGGTCCCGGACAAG
CTACTTTTTCCTCCATGGACTGAATCTAAGCTGGACTTCCTCGAGTTGCT
CTCGATGGACGGCTATCTTGACGAGGATCCCGAGCATCCGCGGGCGAAGC
GGATCCTTCGACAGACGATTCGAGACCGTGACCTCGCAACGTTTAAGCGA
TTGCTGAGCATGCGTATTCGTGTGCCGTGGTACAAGTACCCCATTCGGTG
GCCGGTTCTTCCAAATCACTTCTACGTGGCTTTGAAGTATGCGGATGAGG
TGAAGGACCCTTTCGTCAGGTTGCTGGCATCTCGGGATAAGTTGCCAGGA
TGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003933KJC3_003933Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003933-T1KJC3_003933-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003933-T1.utr5p1KJC3_003933-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003933-T1.exon1KJC3_003933-T1.exon1Aspergillus niger KJC3exon
KJC3_003933-T1.exon2KJC3_003933-T1.exon2Aspergillus niger KJC3exon
KJC3_003933-T1.exon3KJC3_003933-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003933-T1.cdsKJC3_003933-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003933-T1.utr3p1KJC3_003933-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3471452..3473609 +
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