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KJC3_003936-T1, KJC3_003936-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003936-T1
Unique NameKJC3_003936-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3477369..3478787-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003936-T1 ID=KJC3_003936-T1|Name=KJC3_003936-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1419bp|location=Sequence derived from alignment at ch3:3477369..3478787- (Aspergillus niger KJC3)
ATGACACGTTCCGCCACTGCGCGGGAGACAGCGCTACTTGCTGCTCAGAT
GCAGCAGAACGAGGCCCAGCCATCCAAGGTATCAGACTCGGATGCTGCAG
CCTTCAAAGACTCGGCCAGAAGAGCAACCGCCGCTACATCTGCGAGTCAC
ACTCGACCCACGAAGCGCAACGGGCCAGTTGGTGAACCTGTCTCCAAGAG
GACAAAGACGAACCGCAGAAATGCACAAAATAATGATGCCCAAGAACTTC
CTCACAATTTAGGTTCGGCTACTCTGCTACCCGAGCTGCAAGATAAGAGC
GCTCCAATTAAGCTAGACACCCGCGACACCCCTATAAAGAAAGAAGAGAT
AGATGCAATTTCCAACACCCTGCAGAACACTGTCGACAAGGCCACAAAAG
CGGCCTCGGGGTCCAGTGAAAAGGAGAAGAGATCCAAAAAGACTAATACA
TATGGCCTCACACCTGGAATTACCCCATTCCCAGACTGGGCTCGTCCCAC
CCCTGAAGAATGTGAAGAAGTCAATCGGTTACTCTCGACCGTACACGGAG
AGATTGTTGCACCTACCACTATTCCGGAGCCATCGCTCACTGTTACCGGC
TGTGGCGAGGTTCCTTCGGTCCTTGATGCTCTCATCCGCACGTTGCTCAG
CGGAGCAACAACAGGAAACAACTCTGCCATGGCATTCAACGGTCTTGTGC
AGAGATTTGGTATCCTGAAAGAGGGTATCGGTAAAGGAAGCGTGGATTGG
GATGCTGTCCGTCAGGCGCCACTCAAGGATGTCTTTGAAGCCATCAAACG
TGGCGGCTTAGCGGATATCAAGAGCAAGAAGATCAAGGCTATACTAGACA
TGGTCTACGAAGAGAATCAGCAGCGCAGAGACATGCTGCTGAAGGGTTCC
CGGGACGCACCACAGGATCTGATCAAGAAGTCCGAAGGTGGCAAGCAATA
TGAAATTGCATGCGCGGACCAGCACTTCCTATCCCTGAACCATCTTCACA
GCCTTGCCACAGAGGACGCCATGGTGGAGTTGGTTAAATACCCGGGTATA
GGCCCGAAGACGGCTGCTTGTGTGTTGCTCTTTTGCTTGCAGCGCCCTTG
CTTTGCAGTTGATACTCACATCTTCCGTATATGCAAGTGGTTGGGCTGGG
TGCCTTCGGACAAAGCAACGGAGATTACGGCGTTCAGCCATCTTGAAGTG
CGCATTCCTGATCATTTGAAGTATTCCCTTCATCAGCTCCTCATCCGTCA
TGGTAAGTCTTGTCCACGGTGTCGGGCAATTACTGGGCAGTCATCTGCCG
GATGGGAGGAGGGCTGTGTGATTGATCATCTGGTAAAAAGGACGGGAAAG
AGGAAGGGAGGTGGCACAGAATCAGTGACGGAGGATGCCAAATCCAATGG
GCGGAAACGCCGTGCTTAA
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Coding sequence (CDS) from alignment at ch3:3477369..3478787-

>KJC3_003936-T1 ID=KJC3_003936-T1|Name=KJC3_003936-T1|organism=Aspergillus niger KJC3|type=CDS|length=1419bp|location=Sequence derived from alignment at ch3:3477369..3478787- (Aspergillus niger KJC3)
ATGACACGTTCCGCCACTGCGCGGGAGACAGCGCTACTTGCTGCTCAGAT
GCAGCAGAACGAGGCCCAGCCATCCAAGGTATCAGACTCGGATGCTGCAG
CCTTCAAAGACTCGGCCAGAAGAGCAACCGCCGCTACATCTGCGAGTCAC
ACTCGACCCACGAAGCGCAACGGGCCAGTTGGTGAACCTGTCTCCAAGAG
GACAAAGACGAACCGCAGAAATGCACAAAATAATGATGCCCAAGAACTTC
CTCACAATTTAGGTTCGGCTACTCTGCTACCCGAGCTGCAAGATAAGAGC
GCTCCAATTAAGCTAGACACCCGCGACACCCCTATAAAGAAAGAAGAGAT
AGATGCAATTTCCAACACCCTGCAGAACACTGTCGACAAGGCCACAAAAG
CGGCCTCGGGGTCCAGTGAAAAGGAGAAGAGATCCAAAAAGACTAATACA
TATGGCCTCACACCTGGAATTACCCCATTCCCAGACTGGGCTCGTCCCAC
CCCTGAAGAATGTGAAGAAGTCAATCGGTTACTCTCGACCGTACACGGAG
AGATTGTTGCACCTACCACTATTCCGGAGCCATCGCTCACTGTTACCGGC
TGTGGCGAGGTTCCTTCGGTCCTTGATGCTCTCATCCGCACGTTGCTCAG
CGGAGCAACAACAGGAAACAACTCTGCCATGGCATTCAACGGTCTTGTGC
AGAGATTTGGTATCCTGAAAGAGGGTATCGGTAAAGGAAGCGTGGATTGG
GATGCTGTCCGTCAGGCGCCACTCAAGGATGTCTTTGAAGCCATCAAACG
TGGCGGCTTAGCGGATATCAAGAGCAAGAAGATCAAGGCTATACTAGACA
TGGTCTACGAAGAGAATCAGCAGCGCAGAGACATGCTGCTGAAGGGTTCC
CGGGACGCACCACAGGATCTGATCAAGAAGTCCGAAGGTGGCAAGCAATA
TGAAATTGCATGCGCGGACCAGCACTTCCTATCCCTGAACCATCTTCACA
GCCTTGCCACAGAGGACGCCATGGTGGAGTTGGTTAAATACCCGGGTATA
GGCCCGAAGACGGCTGCTTGTGTGTTGCTCTTTTGCTTGCAGCGCCCTTG
CTTTGCAGTTGATACTCACATCTTCCGTATATGCAAGTGGTTGGGCTGGG
TGCCTTCGGACAAAGCAACGGAGATTACGGCGTTCAGCCATCTTGAAGTG
CGCATTCCTGATCATTTGAAGTATTCCCTTCATCAGCTCCTCATCCGTCA
TGGTAAGTCTTGTCCACGGTGTCGGGCAATTACTGGGCAGTCATCTGCCG
GATGGGAGGAGGGCTGTGTGATTGATCATCTGGTAAAAAGGACGGGAAAG
AGGAAGGGAGGTGGCACAGAATCAGTGACGGAGGATGCCAAATCCAATGG
GCGGAAACGCCGTGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006284base-excision repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003936KJC3_003936Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003936-T1.cdsKJC3_003936-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003936-T1.exon1KJC3_003936-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003936-T1KJC3_003936-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011257
DBxrefInterPro:IPR023170
DBxrefInterPro:IPR003265
DBxrefPFAM:PF00730
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3477369..3478787 -
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