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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3504665..3506988+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003949-T1 ID=KJC3_003949-T1|Name=KJC3_003949-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2324bp|location=Sequence derived from alignment at ch3:3504665..3506988+ (Aspergillus niger KJC3)
GTGGGACTGACGTAGTCGCTGTGTAGACATATATTCCCTCTATTCCCTCC
ACCTCTTGTAGCTCAGAGTCGTGCTTGTTGTTCTGGAAAGCTTTCTCCGC
TACTTCCTTCTCTTCATCATCTCATCTACTGTACTTCTATCCTGCCGGTC
CGGATAGTATCTATACCCCCTCCCCACATATACTTCCCGATAAGATAAAG
CATACCACTCCTTCATCATGGTGCAAGTCGACACCCAACTCAAAGACGTC
GTCATCCTCGGCAATGTGAGCTCGGAGGCTCGCAAGATCCTCACCAAGGA
CGCATGTGCCTTCCTCGCCATCCTCCACCGCACCTTCAACCCTACTCGCA
AGGCCCTCCTCCAGCGCCGCATCGACCGCCAGGCCGAGATTGACAAGGGT
CACCTTCCCGACTTCCTGCCCGAGACAAAGCACATTCGTGAGAACGATGC
CTGGAAGGGTGCTCCCCCGGCTCCGGGACTCGTCGACCGCCGTGTGGAAA
TCACGGGTCCCACAGATCGCAAGATGGTCGTCAACGCGTTGAACTCCGAT
GTCTGGACATACATGGCTGATTTCGAGGGTAAGTCCCTTTCTATTACCCC
AGATTCTCCCCGAAAAGAATAGCATCTAACAACAGACAGATTCCAGCGCC
CCCACCTGGGAAAACATGATCAACGGCCAAGTCAACCTCTACGACGCCAT
CCGCCGCCAGGTCGACTTCACCCAAGGCGGCAAGGAATACAAGCTGCGGA
CGGACCGCGTGCTCCCCACCCTCATTGCTCGCGCTCGTGGCTGGCACCTC
GACGAGAAGCACTTCACTGTCGACGGCACCCCCATCTCCGGCAGTCTGTT
TGACTTCGGTCTGTACTTCTACCACAATGCCAAGGAGCTCGTTGCGCGCG
GCTTCGGCCCGTACTTCTACCTCCCCAAGATGGAGTCGCATCTGGAGGCG
CGTCTATGGAACGACGTCTTCAACCTGGCTCAGGATTACATTGGTATGCC
GCGCGGAACGATCCGTGGTACGGTGCTGATCGAGACCATCTCGGCGGCGT
TTGAGATGGATGAGATCATCTACGAGTTGCGCGAACACAGCTCCGGATTG
AACTGTGGACGCTGGGATTACATCTTCTCCTTCATCAAGAAGTTCCGCAA
GCACCCCAACTTTGTGTTGCCGGACCGCTCGGACGTTACTATGACGGTGC
CGTTCATGGATGCGTATGTGAAGTTGTTGATTAAGACGTGTCACCGCAGA
GGAGTCCATGCTATGGTAGGCCAACCATTCCCCATTATACTTGATGACGA
TGCTAATAAACTTGTAGGGAGGCATGGCCGCTCAAATTCCCATCAAGAAC
GACCCCGCCGCCAACGACAAGGCCATGGAGAGCGTGCGCGCCGACAAGCT
GCGTGAAGTGCGCGCCGGACACGACGGCACCTGGGTTGCGCACCCTGCGC
TGGCCTCCATCGCCTCGGAGATCTTCAACACCTACATGCCCACTCCCAAC
CAGCTGTTCGTCCGCCGCGAGGACGTTCACATCACCGCCAACGATCTCCT
GAACACCAACGTCCCCGGCAAGATCACCGAGGACGGCATCCGCAAGAACC
TGAACATCGGCCTGTCCTACATGGAGGGATGGCTCCGCGGTGTGGGCTGC
ATTCCGATCAACTTCCTGATGGTACGCTCCATCTCTATTCCAAATATCCC
AAGAATAACATATACTAATAAAGAAATAGGAGGACGCCGCCACCGCCGAA
GTCTCCCGCAGTCAGCTCTGGCAATGGACGCATCACGGCATCACCACCTC
GGACGGCAAGAAGGTCGACAAGGCGTACGCCCTGCGTCTCTTGCAAGAGC
AGGCGGACAGTCTCGCGGCCAAGGGTCCCCAGGGTAACAAGTTCCAGCTT
GCAGCGCGGTATTTTGCCGGCCAGGTGACGGGCGAGGACTATGCCGATTT
CCTGACGAGTTTGTTGTATAACGAGATTTCGTCGGCGGGCAAGGCGGAGC
CGGCTGCTAAGCTGTAAGCTGAGCAGTTTGCACTTGATTTTCTTCCGTAA
TGGTGTTACGATATGTTTATGGCATGGGTCTTACTTGTTTATATTATTAG
GATGGATGGGTTTGTGGGTTTGATAGGCTGGACTTATTATTATCATCATC
ATTGTTGCTGCGATTGTTATTGTGGCATTACACATATTGAATGAATGAAT
GCATTTTCATTAGAGATGATCCTCGGTATATCCAAGTTGATAACGAAGTT
ACTGCTGTATTGGCACGTTGTATATCACTCTGAGATGCGTCGTACAGTTG
TTGCCAGTCTTGAATGGCATGAGG back to topCoding sequence (CDS) from alignment at ch3:3504665..3506988+ >KJC3_003949-T1 ID=KJC3_003949-T1|Name=KJC3_003949-T1|organism=Aspergillus niger KJC3|type=CDS|length=6516bp|location=Sequence derived from alignment at ch3:3504665..3506988+ (Aspergillus niger KJC3)
ATGGTGCAAGTCGACACCCAACTCAAAGACGTCGTCATCCTCGGCAATGT
GAGCTCGGAGGCTCGCAAGATCCTCACCAAGGACGCATGTGCCTTCCTCG
CCATCCTCCACCGCACCTTCAACCCTACTCGCAAGGCCCTCCTCCAGCGC
CGCATCGACCGCCAGGCCGAGATTGACAAGGGTCACCTTCCCGACTTCCT
GCCCGAGACAAAGCACATTCGTGAGAACGATGCCTGGAAGGGTGCTCCCC
CGGCTCCGGGACTCGTCGACCGCCGTGTGGAAATCACGGGTCCCACAGAT
CGCAAGATGGTCGTCAACGCGTTGAACTCCGATGTCTGGACATACATGGC
TGATTTCGAGGATTCCAGCGCCCCCACCTGGGAAAACATGATCAACGGCC
AAGTCAACCTCTACGACGCCATCCGCCGCCAGGTCGACTTCACCCAAGGC
GGCAAGGAATACAAGCTGCGGACGGACCGCGTGCTCCCCACCCTCATTGC
TCGCGCTCGTGGCTGGCACCTCGACGAGAAGCACTTCACTGTCGACGGCA
CCCCCATCTCCGGCAGTCTGTTTGACTTCGGTCTGTACTTCTACCACAAT
GCCAAGGAGCTCGTTGCGCGCGGCTTCGGCCCGTACTTCTACCTCCCCAA
GATGGAGTCGCATCTGGAGGCGCGTCTATGGAACGACGTCTTCAACCTGG
CTCAGGATTACATTGGTATGCCGCGCGGAACGATCCGTGGTACGGTGCTG
ATCGAGACCATCTCGGCGGCGTTTGAGATGGATGAGATCATCTACGAGTT
GCGCGAACACAGCTCCGGATTGAACTGTGGACGCTGGGATTACATCTTCT
CCTTCATCAAGAAGTTCCGCAAGCACCCCAACTTTGTGTTGCCGGACCGC
TCGGACGTTACTATGACGGTGCCGTTCATGGATGCGTATGTGAAGTTGTT
GATTAAGACGTGTCACCGCAGAGGAGTCCATGCTATGGGAGGCATGGCCG
CTCAAATTCCCATCAAGAACGACCCCGCCGCCAACGACAAGGCCATGGAG
AGCGTGCGCGCCGACAAGCTGCGTGAAGTGCGCGCCGGACACGACGGCAC
CTGGGTTGCGCACCCTGCGCTGGCCTCCATCGCCTCGGAGATCTTCAACA
CCTACATGCCCACTCCCAACCAGCTGTTCGTCCGCCGCGAGGACGTTCAC
ATCACCGCCAACGATCTCCTGAACACCAACGTCCCCGGCAAGATCACCGA
GGACGGCATCCGCAAGAACCTGAACATCGGCCTGTCCTACATGGAGGGAT
GGCTCCGCGGTGTGGGCTGCATTCCGATCAACTTCCTGATGGAGGACGCC
GCCACCGCCGAAGTCTCCCGCAGTCAGCTCTGGCAATGGACGCATCACGG
CATCACCACCTCGGACGGCAAGAAGGTCGACAAGGCGTACGCCCTGCGTC
TCTTGCAAGAGCAGGCGGACAGTCTCGCGGCCAAGGGTCCCCAGGGTAAC
AAGTTCCAGCTTGCAGCGCGGTATTTTGCCGGCCAGGTGACGGGCGAGGA
CTATGCCGATTTCCTGACGAGTTTGTTGTATAACGAGATTTCGTCGGCGG
GCAAGGCGGAGCCGGCTGCTAAGCTGTAAATGGTGCAAGTCGACACCCAA
CTCAAAGACGTCGTCATCCTCGGCAATGTGAGCTCGGAGGCTCGCAAGAT
CCTCACCAAGGACGCATGTGCCTTCCTCGCCATCCTCCACCGCACCTTCA
ACCCTACTCGCAAGGCCCTCCTCCAGCGCCGCATCGACCGCCAGGCCGAG
ATTGACAAGGGTCACCTTCCCGACTTCCTGCCCGAGACAAAGCACATTCG
TGAGAACGATGCCTGGAAGGGTGCTCCCCCGGCTCCGGGACTCGTCGACC
GCCGTGTGGAAATCACGGGTCCCACAGATCGCAAGATGGTCGTCAACGCG
TTGAACTCCGATGTCTGGACATACATGGCTGATTTCGAGGATTCCAGCGC
CCCCACCTGGGAAAACATGATCAACGGCCAAGTCAACCTCTACGACGCCA
TCCGCCGCCAGGTCGACTTCACCCAAGGCGGCAAGGAATACAAGCTGCGG
ACGGACCGCGTGCTCCCCACCCTCATTGCTCGCGCTCGTGGCTGGCACCT
CGACGAGAAGCACTTCACTGTCGACGGCACCCCCATCTCCGGCAGTCTGT
TTGACTTCGGTCTGTACTTCTACCACAATGCCAAGGAGCTCGTTGCGCGC
GGCTTCGGCCCGTACTTCTACCTCCCCAAGATGGAGTCGCATCTGGAGGC
GCGTCTATGGAACGACGTCTTCAACCTGGCTCAGGATTACATTGGTATGC
CGCGCGGAACGATCCGTGGTACGGTGCTGATCGAGACCATCTCGGCGGCG
TTTGAGATGGATGAGATCATCTACGAGTTGCGCGAACACAGCTCCGGATT
GAACTGTGGACGCTGGGATTACATCTTCTCCTTCATCAAGAAGTTCCGCA
AGCACCCCAACTTTGTGTTGCCGGACCGCTCGGACGTTACTATGACGGTG
CCGTTCATGGATGCGTATGTGAAGTTGTTGATTAAGACGTGTCACCGCAG
AGGAGTCCATGCTATGGGAGGCATGGCCGCTCAAATTCCCATCAAGAACG
ACCCCGCCGCCAACGACAAGGCCATGGAGAGCGTGCGCGCCGACAAGCTG
CGTGAAGTGCGCGCCGGACACGACGGCACCTGGGTTGCGCACCCTGCGCT
GGCCTCCATCGCCTCGGAGATCTTCAACACCTACATGCCCACTCCCAACC
AGCTGTTCGTCCGCCGCGAGGACGTTCACATCACCGCCAACGATCTCCTG
AACACCAACGTCCCCGGCAAGATCACCGAGGACGGCATCCGCAAGAACCT
GAACATCGGCCTGTCCTACATGGAGGGATGGCTCCGCGGTGTGGGCTGCA
TTCCGATCAACTTCCTGATGGAGGACGCCGCCACCGCCGAAGTCTCCCGC
AGTCAGCTCTGGCAATGGACGCATCACGGCATCACCACCTCGGACGGCAA
GAAGGTCGACAAGGCGTACGCCCTGCGTCTCTTGCAAGAGCAGGCGGACA
GTCTCGCGGCCAAGGGTCCCCAGGGTAACAAGTTCCAGCTTGCAGCGCGG
TATTTTGCCGGCCAGGTGACGGGCGAGGACTATGCCGATTTCCTGACGAG
TTTGTTGTATAACGAGATTTCGTCGGCGGGCAAGGCGGAGCCGGCTGCTA
AGCTGTAAATGGTGCAAGTCGACACCCAACTCAAAGACGTCGTCATCCTC
GGCAATGTGAGCTCGGAGGCTCGCAAGATCCTCACCAAGGACGCATGTGC
CTTCCTCGCCATCCTCCACCGCACCTTCAACCCTACTCGCAAGGCCCTCC
TCCAGCGCCGCATCGACCGCCAGGCCGAGATTGACAAGGGTCACCTTCCC
GACTTCCTGCCCGAGACAAAGCACATTCGTGAGAACGATGCCTGGAAGGG
TGCTCCCCCGGCTCCGGGACTCGTCGACCGCCGTGTGGAAATCACGGGTC
CCACAGATCGCAAGATGGTCGTCAACGCGTTGAACTCCGATGTCTGGACA
TACATGGCTGATTTCGAGGATTCCAGCGCCCCCACCTGGGAAAACATGAT
CAACGGCCAAGTCAACCTCTACGACGCCATCCGCCGCCAGGTCGACTTCA
CCCAAGGCGGCAAGGAATACAAGCTGCGGACGGACCGCGTGCTCCCCACC
CTCATTGCTCGCGCTCGTGGCTGGCACCTCGACGAGAAGCACTTCACTGT
CGACGGCACCCCCATCTCCGGCAGTCTGTTTGACTTCGGTCTGTACTTCT
ACCACAATGCCAAGGAGCTCGTTGCGCGCGGCTTCGGCCCGTACTTCTAC
CTCCCCAAGATGGAGTCGCATCTGGAGGCGCGTCTATGGAACGACGTCTT
CAACCTGGCTCAGGATTACATTGGTATGCCGCGCGGAACGATCCGTGGTA
CGGTGCTGATCGAGACCATCTCGGCGGCGTTTGAGATGGATGAGATCATC
TACGAGTTGCGCGAACACAGCTCCGGATTGAACTGTGGACGCTGGGATTA
CATCTTCTCCTTCATCAAGAAGTTCCGCAAGCACCCCAACTTTGTGTTGC
CGGACCGCTCGGACGTTACTATGACGGTGCCGTTCATGGATGCGTATGTG
AAGTTGTTGATTAAGACGTGTCACCGCAGAGGAGTCCATGCTATGGGAGG
CATGGCCGCTCAAATTCCCATCAAGAACGACCCCGCCGCCAACGACAAGG
CCATGGAGAGCGTGCGCGCCGACAAGCTGCGTGAAGTGCGCGCCGGACAC
GACGGCACCTGGGTTGCGCACCCTGCGCTGGCCTCCATCGCCTCGGAGAT
CTTCAACACCTACATGCCCACTCCCAACCAGCTGTTCGTCCGCCGCGAGG
ACGTTCACATCACCGCCAACGATCTCCTGAACACCAACGTCCCCGGCAAG
ATCACCGAGGACGGCATCCGCAAGAACCTGAACATCGGCCTGTCCTACAT
GGAGGGATGGCTCCGCGGTGTGGGCTGCATTCCGATCAACTTCCTGATGG
AGGACGCCGCCACCGCCGAAGTCTCCCGCAGTCAGCTCTGGCAATGGACG
CATCACGGCATCACCACCTCGGACGGCAAGAAGGTCGACAAGGCGTACGC
CCTGCGTCTCTTGCAAGAGCAGGCGGACAGTCTCGCGGCCAAGGGTCCCC
AGGGTAACAAGTTCCAGCTTGCAGCGCGGTATTTTGCCGGCCAGGTGACG
GGCGAGGACTATGCCGATTTCCTGACGAGTTTGTTGTATAACGAGATTTC
GTCGGCGGGCAAGGCGGAGCCGGCTGCTAAGCTGTAAATGGTGCAAGTCG
ACACCCAACTCAAAGACGTCGTCATCCTCGGCAATGTGAGCTCGGAGGCT
CGCAAGATCCTCACCAAGGACGCATGTGCCTTCCTCGCCATCCTCCACCG
CACCTTCAACCCTACTCGCAAGGCCCTCCTCCAGCGCCGCATCGACCGCC
AGGCCGAGATTGACAAGGGTCACCTTCCCGACTTCCTGCCCGAGACAAAG
CACATTCGTGAGAACGATGCCTGGAAGGGTGCTCCCCCGGCTCCGGGACT
CGTCGACCGCCGTGTGGAAATCACGGGTCCCACAGATCGCAAGATGGTCG
TCAACGCGTTGAACTCCGATGTCTGGACATACATGGCTGATTTCGAGGAT
TCCAGCGCCCCCACCTGGGAAAACATGATCAACGGCCAAGTCAACCTCTA
CGACGCCATCCGCCGCCAGGTCGACTTCACCCAAGGCGGCAAGGAATACA
AGCTGCGGACGGACCGCGTGCTCCCCACCCTCATTGCTCGCGCTCGTGGC
TGGCACCTCGACGAGAAGCACTTCACTGTCGACGGCACCCCCATCTCCGG
CAGTCTGTTTGACTTCGGTCTGTACTTCTACCACAATGCCAAGGAGCTCG
TTGCGCGCGGCTTCGGCCCGTACTTCTACCTCCCCAAGATGGAGTCGCAT
CTGGAGGCGCGTCTATGGAACGACGTCTTCAACCTGGCTCAGGATTACAT
TGGTATGCCGCGCGGAACGATCCGTGGTACGGTGCTGATCGAGACCATCT
CGGCGGCGTTTGAGATGGATGAGATCATCTACGAGTTGCGCGAACACAGC
TCCGGATTGAACTGTGGACGCTGGGATTACATCTTCTCCTTCATCAAGAA
GTTCCGCAAGCACCCCAACTTTGTGTTGCCGGACCGCTCGGACGTTACTA
TGACGGTGCCGTTCATGGATGCGTATGTGAAGTTGTTGATTAAGACGTGT
CACCGCAGAGGAGTCCATGCTATGGGAGGCATGGCCGCTCAAATTCCCAT
CAAGAACGACCCCGCCGCCAACGACAAGGCCATGGAGAGCGTGCGCGCCG
ACAAGCTGCGTGAAGTGCGCGCCGGACACGACGGCACCTGGGTTGCGCAC
CCTGCGCTGGCCTCCATCGCCTCGGAGATCTTCAACACCTACATGCCCAC
TCCCAACCAGCTGTTCGTCCGCCGCGAGGACGTTCACATCACCGCCAACG
ATCTCCTGAACACCAACGTCCCCGGCAAGATCACCGAGGACGGCATCCGC
AAGAACCTGAACATCGGCCTGTCCTACATGGAGGGATGGCTCCGCGGTGT
GGGCTGCATTCCGATCAACTTCCTGATGGAGGACGCCGCCACCGCCGAAG
TCTCCCGCAGTCAGCTCTGGCAATGGACGCATCACGGCATCACCACCTCG
GACGGCAAGAAGGTCGACAAGGCGTACGCCCTGCGTCTCTTGCAAGAGCA
GGCGGACAGTCTCGCGGCCAAGGGTCCCCAGGGTAACAAGTTCCAGCTTG
CAGCGCGGTATTTTGCCGGCCAGGTGACGGGCGAGGACTATGCCGATTTC
CTGACGAGTTTGTTGTATAACGAGATTTCGTCGGCGGGCAAGGCGGAGCC
GGCTGCTAAGCTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006097 | glyoxylate cycle |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0004474 | malate synthase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003949-T1.utr5p1 | KJC3_003949-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003949-T1.utr3p1 | KJC3_003949-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011076 |
| DBxref | InterPro:IPR019830 |
| DBxref | InterPro:IPR001465 |
| DBxref | InterPro:IPR006252 |
| DBxref | PFAM:PF01274 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3504665..3506988 + |
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