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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3516462..3518129- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003953-T1 ID=KJC3_003953-T1|Name=KJC3_003953-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1668bp|location=Sequence derived from alignment at ch3:3516462..3518129- (Aspergillus niger KJC3)
ATGGAACGACCCAAGACCAACGTGTCCGCAGCTAGTCCGGCCAGCGACCA
TTCTACACACCTCGACGATGATGCGAGGAGACTGGCGGAGATGGGCTATA
CCCAGGACATGCAGCGGAACTTCTCCGTGCTGTCGCTCCTCGGGGTCGCC
TTCTCCCTGGCAAACTCATGGTTCGGTATCTCCGCGTCCTTGATCACAGG
CATTAACTCAGGAGGCACCGTGTTGACTATCTACGGCATCCCCTGGATCG
CTTTTGTTTCGACCTGCGTTGGAGTCAGCCTGTCCGAATTGGCATCGGCC
ATGCCGAACGCAGGTGGCCAATACTTTTGGGCCAGTGAGCTGGCGCCGAG
GAAATATGCGTCGTTCGCATCATATCTGACAGGCTGGTTGGCTTGGGCGG
GCGCCATTTTTACCTGCGCCAGTGTTGCGTTAAGCCTGGCCTCTGCTGGT
GTTGGCATGTGGCAGCTAACACATCCGGACTTGTATGTTCTTGTTAAAGA
TTGGATTGCGACTTCTCTAACGATATAGTACACCTCAACCATGGCATTCA
GTGGTAGCCTACCAGCTGGTCAACTTTTTCGCCTATCTGTTCAATTGCGT
CGGCAAAGTCCTTCCTACCGTGGCCACCACAACCCTATACATATCCCTCA
TCTCGTTCGTTGTCATCCTGATCACCGTTCCTGCGGCAGCTCCCACACAC
AGTTCGGCTGAATTCGTCTTTGCTCACTTTGTCAACTCAACGGGCTGGCC
CTCTGACGGGATTGCGTTCCTCGTGGGTCTGATCAATCCCAACTGGATAT
TCGCATGTCTTGACTCGGCCACCCATTTGGCTGAGGAAGTTGGGCAACCT
GAGCGTAGCATTCCCATTGCGATCCTCTGTACCGTATTGATTGGCTTTGT
CACCTCATGGACTTACTGCATCTCCATGTTTTTCAGCCTGAACAACCTCG
ATGAGATCCTCAATAGCCCGACCGGAGTGCCCATCCTCGCACTGTATTAC
CAAGCCTTGCAGAACAAAGCTGGCGCCATTGTGCTTGAGACGTTGCTTTT
TGTCACAGGTATCGGATGCCAAATTGCCTGTCATACCTGGCAATCTCGCC
TATGCTGGTCCTTTGCACGAGACCGGGGCCTACCCTGGTCGGCGTTTCTG
TCCCAGGTTCATCCCACGCTGGATGTCCCACTTAACGCGCACAGCGTGAG
CTGCTTTATAGTGGGTCTTCTGGGGCTGCTGTACCTTGGTTCGTCGACTG
CCTTCAACAGCATGGTCACTGCGTGCATTGTGTTACTCTACGCTTCGTAC
GTGGTGCCGATTGTCTGCTTGCTGTGGCGCGGTCGGGGTACTCTCAAGCA
CGGTCCTTTCTGGCTTGGGAGACTCGGCCTAGTATGTAATATTATTGTTC
TAGCATGGACCTTGTTCTGCTTGGTTATATATTCCTTTCCGTCGGTATAT
CCGGTTACCACGGGCAGTAAGTGGCCCCCAGAACAATACCCATTTATCCT
TTCTTTTTAACGTGACTACTAATTCAGTGACTAGATATGAACTATGTGTC
CGCGGTATATGGGGTGGTTGCTGTGCTGATTGCCCTCGATTGGGTGTTGC
GGGGACGCCGGTCCTTCCGGGGACAGACGGCGCGACACATGGAGGCGGCG
GAGGCGAGTCTCACTTAA back to topCoding sequence (CDS) from alignment at ch3:3516462..3518129- >KJC3_003953-T1 ID=KJC3_003953-T1|Name=KJC3_003953-T1|organism=Aspergillus niger KJC3|type=CDS|length=4662bp|location=Sequence derived from alignment at ch3:3516462..3518129- (Aspergillus niger KJC3)
ATATGAACTATGTGTCCGCGGTATATGGGGTGGTTGCTGTGCTGATTGCC
CTCGATTGGGTGTTGCGGGGACGCCGGTCCTTCCGGGGACAGACGGCGCG
ACACATGGAGGCGGCGGAGGCGAGTCTCACTTAATACACCTCAACCATGG
CATTCAGTGGTAGCCTACCAGCTGGTCAACTTTTTCGCCTATCTGTTCAA
TTGCGTCGGCAAAGTCCTTCCTACCGTGGCCACCACAACCCTATACATAT
CCCTCATCTCGTTCGTTGTCATCCTGATCACCGTTCCTGCGGCAGCTCCC
ACACACAGTTCGGCTGAATTCGTCTTTGCTCACTTTGTCAACTCAACGGG
CTGGCCCTCTGACGGGATTGCGTTCCTCGTGGGTCTGATCAATCCCAACT
GGATATTCGCATGTCTTGACTCGGCCACCCATTTGGCTGAGGAAGTTGGG
CAACCTGAGCGTAGCATTCCCATTGCGATCCTCTGTACCGTATTGATTGG
CTTTGTCACCTCATGGACTTACTGCATCTCCATGTTTTTCAGCCTGAACA
ACCTCGATGAGATCCTCAATAGCCCGACCGGAGTGCCCATCCTCGCACTG
TATTACCAAGCCTTGCAGAACAAAGCTGGCGCCATTGTGCTTGAGACGTT
GCTTTTTGTCACAGGTATCGGATGCCAAATTGCCTGTCATACCTGGCAAT
CTCGCCTATGCTGGTCCTTTGCACGAGACCGGGGCCTACCCTGGTCGGCG
TTTCTGTCCCAGGTTCATCCCACGCTGGATGTCCCACTTAACGCGCACAG
CGTGAGCTGCTTTATAGTGGGTCTTCTGGGGCTGCTGTACCTTGGTTCGT
CGACTGCCTTCAACAGCATGGTCACTGCGTGCATTGTGTTACTCTACGCT
TCGTACGTGGTGCCGATTGTCTGCTTGCTGTGGCGCGGTCGGGGTACTCT
CAAGCACGGTCCTTTCTGGCTTGGGAGACTCGGCCTAGTATGTAATATTA
TTGTTCTAGCATGGACCTTGTTCTGCTTGGTTATATATTCCTTTCCGTCG
GTATATCCGGTTACCACGGGCAATGGAACGACCCAAGACCAACGTGTCCG
CAGCTAGTCCGGCCAGCGACCATTCTACACACCTCGACGATGATGCGAGG
AGACTGGCGGAGATGGGCTATACCCAGGACATGCAGCGGAACTTCTCCGT
GCTGTCGCTCCTCGGGGTCGCCTTCTCCCTGGCAAACTCATGGTTCGGTA
TCTCCGCGTCCTTGATCACAGGCATTAACTCAGGAGGCACCGTGTTGACT
ATCTACGGCATCCCCTGGATCGCTTTTGTTTCGACCTGCGTTGGAGTCAG
CCTGTCCGAATTGGCATCGGCCATGCCGAACGCAGGTGGCCAATACTTTT
GGGCCAGTGAGCTGGCGCCGAGGAAATATGCGTCGTTCGCATCATATCTG
ACAGGCTGGTTGGCTTGGGCGGGCGCCATTTTTACCTGCGCCAGTGTTGC
GTTAAGCCTGGCCTCTGCTGGTGTTGGCATGTGGCAGCTAACACATCCGG
ACTTATATGAACTATGTGTCCGCGGTATATGGGGTGGTTGCTGTGCTGAT
TGCCCTCGATTGGGTGTTGCGGGGACGCCGGTCCTTCCGGGGACAGACGG
CGCGACACATGGAGGCGGCGGAGGCGAGTCTCACTTAATACACCTCAACC
ATGGCATTCAGTGGTAGCCTACCAGCTGGTCAACTTTTTCGCCTATCTGT
TCAATTGCGTCGGCAAAGTCCTTCCTACCGTGGCCACCACAACCCTATAC
ATATCCCTCATCTCGTTCGTTGTCATCCTGATCACCGTTCCTGCGGCAGC
TCCCACACACAGTTCGGCTGAATTCGTCTTTGCTCACTTTGTCAACTCAA
CGGGCTGGCCCTCTGACGGGATTGCGTTCCTCGTGGGTCTGATCAATCCC
AACTGGATATTCGCATGTCTTGACTCGGCCACCCATTTGGCTGAGGAAGT
TGGGCAACCTGAGCGTAGCATTCCCATTGCGATCCTCTGTACCGTATTGA
TTGGCTTTGTCACCTCATGGACTTACTGCATCTCCATGTTTTTCAGCCTG
AACAACCTCGATGAGATCCTCAATAGCCCGACCGGAGTGCCCATCCTCGC
ACTGTATTACCAAGCCTTGCAGAACAAAGCTGGCGCCATTGTGCTTGAGA
CGTTGCTTTTTGTCACAGGTATCGGATGCCAAATTGCCTGTCATACCTGG
CAATCTCGCCTATGCTGGTCCTTTGCACGAGACCGGGGCCTACCCTGGTC
GGCGTTTCTGTCCCAGGTTCATCCCACGCTGGATGTCCCACTTAACGCGC
ACAGCGTGAGCTGCTTTATAGTGGGTCTTCTGGGGCTGCTGTACCTTGGT
TCGTCGACTGCCTTCAACAGCATGGTCACTGCGTGCATTGTGTTACTCTA
CGCTTCGTACGTGGTGCCGATTGTCTGCTTGCTGTGGCGCGGTCGGGGTA
CTCTCAAGCACGGTCCTTTCTGGCTTGGGAGACTCGGCCTAGTATGTAAT
ATTATTGTTCTAGCATGGACCTTGTTCTGCTTGGTTATATATTCCTTTCC
GTCGGTATATCCGGTTACCACGGGCAATGGAACGACCCAAGACCAACGTG
TCCGCAGCTAGTCCGGCCAGCGACCATTCTACACACCTCGACGATGATGC
GAGGAGACTGGCGGAGATGGGCTATACCCAGGACATGCAGCGGAACTTCT
CCGTGCTGTCGCTCCTCGGGGTCGCCTTCTCCCTGGCAAACTCATGGTTC
GGTATCTCCGCGTCCTTGATCACAGGCATTAACTCAGGAGGCACCGTGTT
GACTATCTACGGCATCCCCTGGATCGCTTTTGTTTCGACCTGCGTTGGAG
TCAGCCTGTCCGAATTGGCATCGGCCATGCCGAACGCAGGTGGCCAATAC
TTTTGGGCCAGTGAGCTGGCGCCGAGGAAATATGCGTCGTTCGCATCATA
TCTGACAGGCTGGTTGGCTTGGGCGGGCGCCATTTTTACCTGCGCCAGTG
TTGCGTTAAGCCTGGCCTCTGCTGGTGTTGGCATGTGGCAGCTAACACAT
CCGGACTTATATGAACTATGTGTCCGCGGTATATGGGGTGGTTGCTGTGC
TGATTGCCCTCGATTGGGTGTTGCGGGGACGCCGGTCCTTCCGGGGACAG
ACGGCGCGACACATGGAGGCGGCGGAGGCGAGTCTCACTTAATACACCTC
AACCATGGCATTCAGTGGTAGCCTACCAGCTGGTCAACTTTTTCGCCTAT
CTGTTCAATTGCGTCGGCAAAGTCCTTCCTACCGTGGCCACCACAACCCT
ATACATATCCCTCATCTCGTTCGTTGTCATCCTGATCACCGTTCCTGCGG
CAGCTCCCACACACAGTTCGGCTGAATTCGTCTTTGCTCACTTTGTCAAC
TCAACGGGCTGGCCCTCTGACGGGATTGCGTTCCTCGTGGGTCTGATCAA
TCCCAACTGGATATTCGCATGTCTTGACTCGGCCACCCATTTGGCTGAGG
AAGTTGGGCAACCTGAGCGTAGCATTCCCATTGCGATCCTCTGTACCGTA
TTGATTGGCTTTGTCACCTCATGGACTTACTGCATCTCCATGTTTTTCAG
CCTGAACAACCTCGATGAGATCCTCAATAGCCCGACCGGAGTGCCCATCC
TCGCACTGTATTACCAAGCCTTGCAGAACAAAGCTGGCGCCATTGTGCTT
GAGACGTTGCTTTTTGTCACAGGTATCGGATGCCAAATTGCCTGTCATAC
CTGGCAATCTCGCCTATGCTGGTCCTTTGCACGAGACCGGGGCCTACCCT
GGTCGGCGTTTCTGTCCCAGGTTCATCCCACGCTGGATGTCCCACTTAAC
GCGCACAGCGTGAGCTGCTTTATAGTGGGTCTTCTGGGGCTGCTGTACCT
TGGTTCGTCGACTGCCTTCAACAGCATGGTCACTGCGTGCATTGTGTTAC
TCTACGCTTCGTACGTGGTGCCGATTGTCTGCTTGCTGTGGCGCGGTCGG
GGTACTCTCAAGCACGGTCCTTTCTGGCTTGGGAGACTCGGCCTAGTATG
TAATATTATTGTTCTAGCATGGACCTTGTTCTGCTTGGTTATATATTCCT
TTCCGTCGGTATATCCGGTTACCACGGGCAATGGAACGACCCAAGACCAA
CGTGTCCGCAGCTAGTCCGGCCAGCGACCATTCTACACACCTCGACGATG
ATGCGAGGAGACTGGCGGAGATGGGCTATACCCAGGACATGCAGCGGAAC
TTCTCCGTGCTGTCGCTCCTCGGGGTCGCCTTCTCCCTGGCAAACTCATG
GTTCGGTATCTCCGCGTCCTTGATCACAGGCATTAACTCAGGAGGCACCG
TGTTGACTATCTACGGCATCCCCTGGATCGCTTTTGTTTCGACCTGCGTT
GGAGTCAGCCTGTCCGAATTGGCATCGGCCATGCCGAACGCAGGTGGCCA
ATACTTTTGGGCCAGTGAGCTGGCGCCGAGGAAATATGCGTCGTTCGCAT
CATATCTGACAGGCTGGTTGGCTTGGGCGGGCGCCATTTTTACCTGCGCC
AGTGTTGCGTTAAGCCTGGCCTCTGCTGGTGTTGGCATGTGGCAGCTAAC
ACATCCGGACTT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002293 |
| DBxref | PFAM:PF13520 |
| DBxref | PFAM:PF00324 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3516462..3518129 - |
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