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KJC3_003969-T1, KJC3_003969-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003969-T1
Unique NameKJC3_003969-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3555337..3558984-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003969-T1 ID=KJC3_003969-T1|Name=KJC3_003969-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3648bp|location=Sequence derived from alignment at ch3:3555337..3558984- (Aspergillus niger KJC3)
AAACATTCTTGGACCAACTTTCCTGATCGATCCTGCAGTTCATGTCGCAC
TGCAGAGCAGACTCCCAACCTTAAAACACCCTTCAATCATAAACTCCGTA
CAATGGCCAGTCCGGGATCGTCCAATAAAAGAAAGCGCAGACGCCCGGCG
TTCTCATGTACTGCGTGTCGTCGCCGCAAAGTCCGATGCGACCGGGCCAA
CCCGTGTCGACAGTGCGTAACCCAGAATAATGCATCAGCCTGTACATATG
AGCAGAATCGCAATTCGTTTGCCAATCGTGAAACGGCGCCACCTACTAGC
AGCGAAACCAACTATCAGAGGCAACATGTTTTTCAGGAGAGAAATGGTGG
CCAACCCTCGCACACACCTCACGCTTCATCGCAACAGGCTGCATCAACCT
CGGGCCAGATCCGAGGCATGGTGTCAAAGACGAGAGTGTTCGGCCAAGGA
CATTGGATGAATATTTTTTCATTGGTATGTAGCTGACATAAATATTAAAC
TATGCTTTTATTGACGGCGTTACAGACAGAAGGGCTGCCCACCTTGCAAC
CTCTCATGGGCCTATACGACATTATCATACGAAACACAAGCCACGGCCCC
TTGGATGCCATCGCTGATAAGATGGCCCAATGCAAAAGGCTAGCTCGAAG
TATCAAAAGTCAAAGACCTAGTCGTAGCAGCCTTCCGACACAGATTCATC
AGTCACTTCCTAGTCCCGATGTCATCCTTGAATTGGCCCAGCTCTATTTC
GCCACATTCGAGTCGTGCTACCGAATACTTCGGAAGAATCCCTTCATGGC
ACATTGCCAGACATACCTGAATAACCACGAATCCGCGGATACTTGTATAG
TCTTACAAATTCTTCTTGTCGTCTCCATCGCAGGCCCTTTGCATCAGGAT
GCCAATGTCCGTATAAATGCGGCGTCAAAAGCTGCAATGTGGATTTATAC
TGCCCAGACATGGCTCTCAGCACCACTAGAAAAAAGCCGCTTAACTTTGG
GGGGCATTCAACTCCACTGTCTGCTTCTTTTGGCCCGCCAAGTAAATCAG
GTTGGCGCCGATCTGATCTGGATATCCACAGGCTCGTTGATGAGGATAGC
CATGCAGATGGGTCTGCATCAAGATCCCAACTGTCTGAGTGAGATGGATC
CCACGGAAAAGGGACTAAGGCGGCGACTTTGGTACACTATCTTAGAATTG
AACCTACAGTCGTCCTTGGATTCCGGAATATTACCAATGATCGCAACTGG
GGACTGGAATACTGAGCCACCAAGCGATCACAATCTCGACGCCGAGCCAG
AGATCGGCGAACGGGAAGAGTCAGCGGCTCATAAGTCAATGAATTTGCAA
CCTGTACTGTCAAGTTCAATACCACTCCGTCTGCATGCCTCCAGACTGAT
AAACGACTTGCGAGAGGAACCGCCCTACGAGGAGGTCCTTGAGGTCGGTA
AAGAATTAGCCTCAGCATGCCGCGACATCTCGCTCACTCTCGACCAACTT
GACTCTGCATCCCCATTAGATCAATTCGCATCAAGCTTCTGCACCCATCT
CATTCGACGCTTTACCTTGTGTCTCCACTACAAATTTGCCATTAAGGCAA
AGATTAATCCCCTATACAGTCACTCCCGCAAGGCCGGTGTTGAAGCCGCA
CTAGATATCATATCACTGGTCGAAGACAACTTGTACGGTCGTGTCCTCCG
TTGTGGGGGCGGCATGTTTCGCGACATTGTGACCCGTGCGGCAATACTCA
TCTTCTCAGAAGCCAGCCCCGATCCAGAAGCGGAGAGTTCGAGTCTGGCG
AAAAGAAGAGATTATGCTCGTCAGGGAACCCTATTGCGAGATGCCCGCTG
CGTCGTTCATTATGCGAAAGATAGAATATATCATGGAGAAACTAATGTCA
AAGTCTATATCTTTTACAATATGATGCTAGCCCAAGCGGAAGCTAGGCTT
AGTGGTCAGTCCGAGGAGGAGGCAGTTTCAAGGACAATGCATGAAAGTGT
GGATGCGTGCTACGGTATGATGCAGGACATGGTAGCTATGGCATCTATCT
CCAGTGGCCCTGATACTGCATCTTTTGGAGATAGTCTCAATAGATCAGAT
GTTTCTGGGGAACCCTTGGATCGTGGTTTCGATTCCATCTACGGCAGCGA
CTTCAACTTCGACTTTCCTGACTTGCAACTCTTTGCGGGGTGGTAAAGTT
AGACTGGTATTCATTAAGGAGAGAAGATATTACATTGGGCGTGACAACAA
AATAATCTCACATGAAGCTAAATGTACAACCCAAAACACGCTCAGCAGCA
ACACAAATTCCATTCGATACCGGATAACTGCCGGAACTCCCGACGTTTAT
CAGTTGTCGACCATGATCGGATACTCTGGCAGTTTCCAGTCCTTGTTGCA
ATCTTCGCGCAACACCCATTGCGAGAGGACGTCCAGTCTCAAGAACGAGG
CTATTGCAAACAGGATATACACCACAGTGATCCCCAAAGTAGATGAAGGG
AGCCTGCTCATGTAATCGTGATCGTCCATGAGTCCCTTTTGGACGTTCAA
CATGAAGGGCTTGAGCTTGTCCTCATAAGTTTTGAAAGCCTCCGCGATGT
CCTCCTTGGAACCAATCCCCTTCGCACAACGGTTTCCTATCTCCCCTGCC
AGAATGTAAGCACCAACCATGGCACACGGCGTGCCCATTCCTGTCATAGC
AGACGGACAATAAGCCGCATCTCCGACCAAAACAACACGGCCTCGCGACC
AGCTATCCAGATTCACCACCCCCATGCGCTCACAATAGAAATCGTCCGCC
TCTTCCATACCTCTGATGATCTCCTCAGACTTCCACCCTGCATCCCGAAA
GACCTGGCCCAAAACCTGCTTCTCCCGCTCAACATCGCCCTTGCTGCAGT
TCTCAAAAGGCCCCGCCTTGCAGAACATATACGCCTGAATCTTGTGCGGG
TTATGACGACGCATCATGATCCCACGCCCCTGCGTAGTCATATACACCGT
TGCATCATATCCCTCCCCCTTCTCCAATTCCCTATCAATCGTGAAATACC
CAGCAGAGACCCCAATCGAGTGAACCGAATCTCTATCATCATCCCCACCC
CCAAGCATCATGGTCCTCATACGAGAACCCAGACCATCCGCACCAACAAC
AAGATCAAATCGCTCTTTCCTCCCATCGGACAAGACCACGTCGACAAAAT
TATCCGTCTGCTGCATTTCCATGACATACATTCCGAACAAATACTCCACG
CGATCCTTAACAGCGTCATGAAGCAGATGGCACAGATCGCCTCTCATGAT
TTCGTAGTCGGTAGTAAAGCTCTGCAATCCCTTCCCACTTCGATTAGCAG
GGAAATACCCCCATCGCCGGTTGCGGCTGTCAACAAGCTGTAGACCTTGT
TCTGGGACGGTGACCTTGCGAAAGGCTTTCTCGAGACCCATTCGTTGGAC
GACTTCAATGCCAGGGCTGCGGAGATCGACCTGGAGTCCGGTGGCTCGTA
AACCAGGGTATCGCTCGATGACTGTGATGATGTGGCCGAGTTTGGATAGC
CAAAAGGCAAGGGCGTTACCGGCGATGCCTGCGCCGCAGATGAGAATTCT
GAGTTTGGACATGATTTGTCTTTACCTCGGGATAATATTGTGAGGATG
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Coding sequence (CDS) from alignment at ch3:3555337..3558984-

>KJC3_003969-T1 ID=KJC3_003969-T1|Name=KJC3_003969-T1|organism=Aspergillus niger KJC3|type=CDS|length=4086bp|location=Sequence derived from alignment at ch3:3555337..3558984- (Aspergillus niger KJC3)
ACAGAAGGGCTGCCCACCTTGCAACCTCTCATGGGCCTATACGACATTAT
CATACGAAACACAAGCCACGGCCCCTTGGATGCCATCGCTGATAAGATGG
CCCAATGCAAAAGGCTAGCTCGAAGTATCAAAAGTCAAAGACCTAGTCGT
AGCAGCCTTCCGACACAGATTCATCAGTCACTTCCTAGTCCCGATGTCAT
CCTTGAATTGGCCCAGCTCTATTTCGCCACATTCGAGTCGTGCTACCGAA
TACTTCGGAAGAATCCCTTCATGGCACATTGCCAGACATACCTGAATAAC
CACGAATCCGCGGATACTTGTATAGTCTTACAAATTCTTCTTGTCGTCTC
CATCGCAGGCCCTTTGCATCAGGATGCCAATGTCCGTATAAATGCGGCGT
CAAAAGCTGCAATGTGGATTTATACTGCCCAGACATGGCTCTCAGCACCA
CTAGAAAAAAGCCGCTTAACTTTGGGGGGCATTCAACTCCACTGTCTGCT
TCTTTTGGCCCGCCAAGTAAATCAGGTTGGCGCCGATCTGATCTGGATAT
CCACAGGCTCGTTGATGAGGATAGCCATGCAGATGGGTCTGCATCAAGAT
CCCAACTGTCTGAGTGAGATGGATCCCACGGAAAAGGGACTAAGGCGGCG
ACTTTGGTACACTATCTTAGAATTGAACCTACAGTCGTCCTTGGATTCCG
GAATATTACCAATGATCGCAACTGGGGACTGGAATACTGAGCCACCAAGC
GATCACAATCTCGACGCCGAGCCAGAGATCGGCGAACGGGAAGAGTCAGC
GGCTCATAAGTCAATGAATTTGCAACCTGTACTGTCAAGTTCAATACCAC
TCCGTCTGCATGCCTCCAGACTGATAAACGACTTGCGAGAGGAACCGCCC
TACGAGGAGGTCCTTGAGGTCGGTAAAGAATTAGCCTCAGCATGCCGCGA
CATCTCGCTCACTCTCGACCAACTTGACTCTGCATCCCCATTAGATCAAT
TCGCATCAAGCTTCTGCACCCATCTCATTCGACGCTTTACCTTGTGTCTC
CACTACAAATTTGCCATTAAGGCAAAGATTAATCCCCTATACAGTCACTC
CCGCAAGGCCGGTGTTGAAGCCGCACTAGATATCATATCACTGGTCGAAG
ACAACTTGTACGGTCGTGTCCTCCGTTGTGGGGGCGGCATGTTTCGCGAC
ATTGTGACCCGTGCGGCAATACTCATCTTCTCAGAAGCCAGCCCCGATCC
AGAAGCGGAGAGTTCGAGTCTGGCGAAAAGAAGAGATTATGCTCGTCAGG
GAACCCTATTGCGAGATGCCCGCTGCGTCGTTCATTATGCGAAAGATAGA
ATATATCATGGAGAAACTAATGTCAAAGTCTATATCTTTTACAATATGAT
GCTAGCCCAAGCGGAAGCTAGGCTTAGTGGTCAGTCCGAGGAGGAGGCAG
TTTCAAGGACAATGCATGAAAGTGTGGATGCGTGCTACGGTATGATGCAG
GACATGGTAGCTATGGCATCTATCTCCAGTGGCCCTGATACTGCATCTTT
TGGAGATAGTCTCAATAGATCAGATGTTTCTGGGGAACCCTTGGATCGTG
GTTTCGATTCCATCTACGGCAGCGACTTCAACTTCGACTTTCCTGACTTG
CAACTCTTTGCGGGGTGGTAAATGGCCAGTCCGGGATCGTCCAATAAAAG
AAAGCGCAGACGCCCGGCGTTCTCATGTACTGCGTGTCGTCGCCGCAAAG
TCCGATGCGACCGGGCCAACCCGTGTCGACAGTGCGTAACCCAGAATAAT
GCATCAGCCTGTACATATGAGCAGAATCGCAATTCGTTTGCCAATCGTGA
AACGGCGCCACCTACTAGCAGCGAAACCAACTATCAGAGGCAACATGTTT
TTCAGGAGAGAAATGGTGGCCAACCCTCGCACACACCTCACGCTTCATCG
CAACAGGCTGCATCAACCTCGGGCCAGATCCGAGGCATGGTGTCAAAGAC
GAGAGTGTTCGGCCAAGGACATTGGATGAATATTTTTTCATTGACAGAAG
GGCTGCCCACCTTGCAACCTCTCATGGGCCTATACGACATTATCATACGA
AACACAAGCCACGGCCCCTTGGATGCCATCGCTGATAAGATGGCCCAATG
CAAAAGGCTAGCTCGAAGTATCAAAAGTCAAAGACCTAGTCGTAGCAGCC
TTCCGACACAGATTCATCAGTCACTTCCTAGTCCCGATGTCATCCTTGAA
TTGGCCCAGCTCTATTTCGCCACATTCGAGTCGTGCTACCGAATACTTCG
GAAGAATCCCTTCATGGCACATTGCCAGACATACCTGAATAACCACGAAT
CCGCGGATACTTGTATAGTCTTACAAATTCTTCTTGTCGTCTCCATCGCA
GGCCCTTTGCATCAGGATGCCAATGTCCGTATAAATGCGGCGTCAAAAGC
TGCAATGTGGATTTATACTGCCCAGACATGGCTCTCAGCACCACTAGAAA
AAAGCCGCTTAACTTTGGGGGGCATTCAACTCCACTGTCTGCTTCTTTTG
GCCCGCCAAGTAAATCAGGTTGGCGCCGATCTGATCTGGATATCCACAGG
CTCGTTGATGAGGATAGCCATGCAGATGGGTCTGCATCAAGATCCCAACT
GTCTGAGTGAGATGGATCCCACGGAAAAGGGACTAAGGCGGCGACTTTGG
TACACTATCTTAGAATTGAACCTACAGTCGTCCTTGGATTCCGGAATATT
ACCAATGATCGCAACTGGGGACTGGAATACTGAGCCACCAAGCGATCACA
ATCTCGACGCCGAGCCAGAGATCGGCGAACGGGAAGAGTCAGCGGCTCAT
AAGTCAATGAATTTGCAACCTGTACTGTCAAGTTCAATACCACTCCGTCT
GCATGCCTCCAGACTGATAAACGACTTGCGAGAGGAACCGCCCTACGAGG
AGGTCCTTGAGGTCGGTAAAGAATTAGCCTCAGCATGCCGCGACATCTCG
CTCACTCTCGACCAACTTGACTCTGCATCCCCATTAGATCAATTCGCATC
AAGCTTCTGCACCCATCTCATTCGACGCTTTACCTTGTGTCTCCACTACA
AATTTGCCATTAAGGCAAAGATTAATCCCCTATACAGTCACTCCCGCAAG
GCCGGTGTTGAAGCCGCACTAGATATCATATCACTGGTCGAAGACAACTT
GTACGGTCGTGTCCTCCGTTGTGGGGGCGGCATGTTTCGCGACATTGTGA
CCCGTGCGGCAATACTCATCTTCTCAGAAGCCAGCCCCGATCCAGAAGCG
GAGAGTTCGAGTCTGGCGAAAAGAAGAGATTATGCTCGTCAGGGAACCCT
ATTGCGAGATGCCCGCTGCGTCGTTCATTATGCGAAAGATAGAATATATC
ATGGAGAAACTAATGTCAAAGTCTATATCTTTTACAATATGATGCTAGCC
CAAGCGGAAGCTAGGCTTAGTGGTCAGTCCGAGGAGGAGGCAGTTTCAAG
GACAATGCATGAAAGTGTGGATGCGTGCTACGGTATGATGCAGGACATGG
TAGCTATGGCATCTATCTCCAGTGGCCCTGATACTGCATCTTTTGGAGAT
AGTCTCAATAGATCAGATGTTTCTGGGGAACCCTTGGATCGTGGTTTCGA
TTCCATCTACGGCAGCGACTTCAACTTCGACTTTCCTGACTTGCAACTCT
TTGCGGGGTGGTAAATGGCCAGTCCGGGATCGTCCAATAAAAGAAAGCGC
AGACGCCCGGCGTTCTCATGTACTGCGTGTCGTCGCCGCAAAGTCCGATG
CGACCGGGCCAACCCGTGTCGACAGTGCGTAACCCAGAATAATGCATCAG
CCTGTACATATGAGCAGAATCGCAATTCGTTTGCCAATCGTGAAACGGCG
CCACCTACTAGCAGCGAAACCAACTATCAGAGGCAACATGTTTTTCAGGA
GAGAAATGGTGGCCAACCCTCGCACACACCTCACGCTTCATCGCAACAGG
CTGCATCAACCTCGGGCCAGATCCGAGGCATGGTGTCAAAGACGAGAGTG
TTCGGCCAAGGACATTGGATGAATATTTTTTCATTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003969KJC3_003969Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003969-T1KJC3_003969-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003969-T1.cdsKJC3_003969-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003969-T1.utr3p1KJC3_003969-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003969-T1.exon2KJC3_003969-T1.exon2Aspergillus niger KJC3exon
KJC3_003969-T1.exon1KJC3_003969-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003969-T1.utr5p1KJC3_003969-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_3.6
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR007219
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3555337..3558984 -
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