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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3581727..3583707+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003976-T1 ID=KJC3_003976-T1|Name=KJC3_003976-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1981bp|location=Sequence derived from alignment at ch3:3581727..3583707+ (Aspergillus niger KJC3)
CCTTGTCATCAGAATGTTGCTGTGTTCATTCACCAGCAATGCAGGAATGC
AACTAGCCTCCGCTCACTCTTACCCTACGAAAATTAGTAGCGTCTCCAAG
GCTCTTTTTTGAGGGGAACAACCATGACCACCTGCCCGCCGCTGGCGGGT
TGTCTGCCTCTCAACCCCACCTATCTCAATGAGGGCAAATCTCACATTGA
ACCGCTGCCTAAGGGTTGAAGGTCATAGGTGGCCAACACCCCAAATTTGA
CTCACTATTAAGCGAATATTGGTCGCCTAAAGTACCTCGTTACGGTTTCT
ACCTGTACTGTCTACACATGTCGCAACAACCCGCTATCTTACCGCGCTCT
GCGGCGCACGATAACAGTCCCGGAAGTATCAGGGGTTTCTTCATTTTCAT
CACTATCATTACTATCCTCTCTATTTCGCTTCGTTTCTGGTCACGATGCA
TCCGCAGCAACGCAGGACTCGGTGCTGGGAGACATACTCAGCGTCTGTGG
TGGGATGATTGGGCCGCTTTAGCAGCCGTGGTAAGTGACTTTGTGATGGA
TCTTCCAAAAGCCCAAAAGCCCAAAGGGGTGAGATGAAGAAGAAGAGCTA
AACAATAAATACTACGAGCTATGCAAAATGCTAACTTCATTTCCATGGCA
GCCCTGGATCCTCGGCCTCTGCGGAGTGGCATTTGCTATGGGCTTCTATG
GCCTCGGCCACCACGCTCAGTTTGTCGATTCAAAGGATCTAGCCATCTTC
CTTAGACTGTTGTATGCAGTATACTACGTCTACGATATCGGCCTCTTTTT
CACCAAGCTCTCTGCCATTCTGTTTCTCTCGCGCATCTTTCCCTGGCACG
CAAACTCCAAGTGGTTCAACTACACCATTGTGGCTACCCACTGCCTCAAC
TGTGCATGGTTGGTCGGAATCATTTTTGGTACCACATTTATGTGCAATCC
CGTGCAGAAGGGCTGGAATCCCACATTACCTGGGCACTGCGGTACCACCA
GCGCCCTTTGGCTTGGAAGCGCAATACCCAGCGTCATCATTGACCTCATC
ATCCTGCTGCTGCCCGTGCCAAAGATCTGGTCCCTGCAAATGACCACCAC
GCGCAAACTGGGCATCATTGGAGTCTTCGTTATTGGTTACAGGTAAAGTG
TTGGAGTGTGGCAATAATTATCGCGTCATGACACTAACTAAGAACAAACA
AACAGTGTCATTGTCGTTTCCCTTGGCCGACTCACTACAGTTCTGCTGAC
TGGTAGTTCCTTGAACTCGGATATTACCTGTACGTCAGAAGTCTCCGATA
CCCAATACTCCTGTCCTGTACCTAATATGTTCATTCTTTATAGACACGGT
TGTTCATCTGGCCTACTGGGTTGGTGCCGAGGCGCCCATCACTATGCTGT
GTATTTGCCTGCCGCCCATGACTACTCTGGGCCGGTATCTAGCCAACAAC
TACTTTTCCAAGATATCCAGCAGAGTTCAGTCTCTGTTTAGCACCATTAA
GGGCAGCAGAGGCACTGTGGCATCACGGAGTTACTCCGCACCGGATTCGC
AATCCCAAAGTATTGCGATGCACAGGAGCTCCATGAAAAAGAGCGTTGAC
AATGACGGCCACAGCCTAGAGTCACAGGAGAGCTCTGCGCATTTATTCCC
CCACGAAGACGCCAATTACTATGCTGGCGCTAGAGCCAATGTTTCTTACC
CTCGCTCGGGTACTCATGGTACAAGCCCGCTTCCGAACTCTGGCGACACT
GGCATTCGTGTAGACAGCATCGTGACTGTCACGCAACGTGTGAGGAAATA
ATTGACTTTGGAGACTGTACTCGTTGTCCTTATGTAAATGTATAATATTT
TCGTTACCTTCTCATTTCTTCCTCCGTATGACCGTAATCGCATTGATCTC
TTGATGGCTTAGGAGTTTATATATAATGGTGTCAAAATCTTGTTATACCA
CTGCGCCCAGCTTGAACCTGCCTTGCACTGT back to topCoding sequence (CDS) from alignment at ch3:3581727..3583707+ >KJC3_003976-T1 ID=KJC3_003976-T1|Name=KJC3_003976-T1|organism=Aspergillus niger KJC3|type=CDS|length=4944bp|location=Sequence derived from alignment at ch3:3581727..3583707+ (Aspergillus niger KJC3)
ATGTCGCAACAACCCGCTATCTTACCGCGCTCTGCGGCGCACGATAACAG
TCCCGGAAGTATCAGGGGTTTCTTCATTTTCATCACTATCATTACTATCC
TCTCTATTTCGCTTCGTTTCTGGTCACGATGCATCCGCAGCAACGCAGGA
CTCGGTGCTGGGAGACATACTCAGCGTCTGTGGTGGGATGATTGGGCCGC
TTTAGCAGCCGTGCCCTGGATCCTCGGCCTCTGCGGAGTGGCATTTGCTA
TGGGCTTCTATGGCCTCGGCCACCACGCTCAGTTTGTCGATTCAAAGGAT
CTAGCCATCTTCCTTAGACTGTTGTATGCAGTATACTACGTCTACGATAT
CGGCCTCTTTTTCACCAAGCTCTCTGCCATTCTGTTTCTCTCGCGCATCT
TTCCCTGGCACGCAAACTCCAAGTGGTTCAACTACACCATTGTGGCTACC
CACTGCCTCAACTGTGCATGGTTGGTCGGAATCATTTTTGGTACCACATT
TATGTGCAATCCCGTGCAGAAGGGCTGGAATCCCACATTACCTGGGCACT
GCGGTACCACCAGCGCCCTTTGGCTTGGAAGCGCAATACCCAGCGTCATC
ATTGACCTCATCATCCTGCTGCTGCCCGTGCCAAAGATCTGGTCCCTGCA
AATGACCACCACGCGCAAACTGGGCATCATTGGAGTCTTCGTTATTGGTT
ACAGTGTCATTGTCGTTTCCCTTGGCCGACTCACTACAGTTCTGCTGACT
GGTAGTTCCTTGAACTCGGATATTACCTACACGGTTGTTCATCTGGCCTA
CTGGGTTGGTGCCGAGGCGCCCATCACTATGCTGTGTATTTGCCTGCCGC
CCATGACTACTCTGGGCCGGTATCTAGCCAACAACTACTTTTCCAAGATA
TCCAGCAGAGTTCAGTCTCTGTTTAGCACCATTAAGGGCAGCAGAGGCAC
TGTGGCATCACGGAGTTACTCCGCACCGGATTCGCAATCCCAAAGTATTG
CGATGCACAGGAGCTCCATGAAAAAGAGCGTTGACAATGACGGCCACAGC
CTAGAGTCACAGGAGAGCTCTGCGCATTTATTCCCCCACGAAGACGCCAA
TTACTATGCTGGCGCTAGAGCCAATGTTTCTTACCCTCGCTCGGGTACTC
ATGGTACAAGCCCGCTTCCGAACTCTGGCGACACTGGCATTCGTGTAGAC
AGCATCGTGACTGTCACGCAACGTGTGAGGAAATAAATGTCGCAACAACC
CGCTATCTTACCGCGCTCTGCGGCGCACGATAACAGTCCCGGAAGTATCA
GGGGTTTCTTCATTTTCATCACTATCATTACTATCCTCTCTATTTCGCTT
CGTTTCTGGTCACGATGCATCCGCAGCAACGCAGGACTCGGTGCTGGGAG
ACATACTCAGCGTCTGTGGTGGGATGATTGGGCCGCTTTAGCAGCCGTGC
CCTGGATCCTCGGCCTCTGCGGAGTGGCATTTGCTATGGGCTTCTATGGC
CTCGGCCACCACGCTCAGTTTGTCGATTCAAAGGATCTAGCCATCTTCCT
TAGACTGTTGTATGCAGTATACTACGTCTACGATATCGGCCTCTTTTTCA
CCAAGCTCTCTGCCATTCTGTTTCTCTCGCGCATCTTTCCCTGGCACGCA
AACTCCAAGTGGTTCAACTACACCATTGTGGCTACCCACTGCCTCAACTG
TGCATGGTTGGTCGGAATCATTTTTGGTACCACATTTATGTGCAATCCCG
TGCAGAAGGGCTGGAATCCCACATTACCTGGGCACTGCGGTACCACCAGC
GCCCTTTGGCTTGGAAGCGCAATACCCAGCGTCATCATTGACCTCATCAT
CCTGCTGCTGCCCGTGCCAAAGATCTGGTCCCTGCAAATGACCACCACGC
GCAAACTGGGCATCATTGGAGTCTTCGTTATTGGTTACAGTGTCATTGTC
GTTTCCCTTGGCCGACTCACTACAGTTCTGCTGACTGGTAGTTCCTTGAA
CTCGGATATTACCTACACGGTTGTTCATCTGGCCTACTGGGTTGGTGCCG
AGGCGCCCATCACTATGCTGTGTATTTGCCTGCCGCCCATGACTACTCTG
GGCCGGTATCTAGCCAACAACTACTTTTCCAAGATATCCAGCAGAGTTCA
GTCTCTGTTTAGCACCATTAAGGGCAGCAGAGGCACTGTGGCATCACGGA
GTTACTCCGCACCGGATTCGCAATCCCAAAGTATTGCGATGCACAGGAGC
TCCATGAAAAAGAGCGTTGACAATGACGGCCACAGCCTAGAGTCACAGGA
GAGCTCTGCGCATTTATTCCCCCACGAAGACGCCAATTACTATGCTGGCG
CTAGAGCCAATGTTTCTTACCCTCGCTCGGGTACTCATGGTACAAGCCCG
CTTCCGAACTCTGGCGACACTGGCATTCGTGTAGACAGCATCGTGACTGT
CACGCAACGTGTGAGGAAATAAATGTCGCAACAACCCGCTATCTTACCGC
GCTCTGCGGCGCACGATAACAGTCCCGGAAGTATCAGGGGTTTCTTCATT
TTCATCACTATCATTACTATCCTCTCTATTTCGCTTCGTTTCTGGTCACG
ATGCATCCGCAGCAACGCAGGACTCGGTGCTGGGAGACATACTCAGCGTC
TGTGGTGGGATGATTGGGCCGCTTTAGCAGCCGTGCCCTGGATCCTCGGC
CTCTGCGGAGTGGCATTTGCTATGGGCTTCTATGGCCTCGGCCACCACGC
TCAGTTTGTCGATTCAAAGGATCTAGCCATCTTCCTTAGACTGTTGTATG
CAGTATACTACGTCTACGATATCGGCCTCTTTTTCACCAAGCTCTCTGCC
ATTCTGTTTCTCTCGCGCATCTTTCCCTGGCACGCAAACTCCAAGTGGTT
CAACTACACCATTGTGGCTACCCACTGCCTCAACTGTGCATGGTTGGTCG
GAATCATTTTTGGTACCACATTTATGTGCAATCCCGTGCAGAAGGGCTGG
AATCCCACATTACCTGGGCACTGCGGTACCACCAGCGCCCTTTGGCTTGG
AAGCGCAATACCCAGCGTCATCATTGACCTCATCATCCTGCTGCTGCCCG
TGCCAAAGATCTGGTCCCTGCAAATGACCACCACGCGCAAACTGGGCATC
ATTGGAGTCTTCGTTATTGGTTACAGTGTCATTGTCGTTTCCCTTGGCCG
ACTCACTACAGTTCTGCTGACTGGTAGTTCCTTGAACTCGGATATTACCT
ACACGGTTGTTCATCTGGCCTACTGGGTTGGTGCCGAGGCGCCCATCACT
ATGCTGTGTATTTGCCTGCCGCCCATGACTACTCTGGGCCGGTATCTAGC
CAACAACTACTTTTCCAAGATATCCAGCAGAGTTCAGTCTCTGTTTAGCA
CCATTAAGGGCAGCAGAGGCACTGTGGCATCACGGAGTTACTCCGCACCG
GATTCGCAATCCCAAAGTATTGCGATGCACAGGAGCTCCATGAAAAAGAG
CGTTGACAATGACGGCCACAGCCTAGAGTCACAGGAGAGCTCTGCGCATT
TATTCCCCCACGAAGACGCCAATTACTATGCTGGCGCTAGAGCCAATGTT
TCTTACCCTCGCTCGGGTACTCATGGTACAAGCCCGCTTCCGAACTCTGG
CGACACTGGCATTCGTGTAGACAGCATCGTGACTGTCACGCAACGTGTGA
GGAAATAAATGTCGCAACAACCCGCTATCTTACCGCGCTCTGCGGCGCAC
GATAACAGTCCCGGAAGTATCAGGGGTTTCTTCATTTTCATCACTATCAT
TACTATCCTCTCTATTTCGCTTCGTTTCTGGTCACGATGCATCCGCAGCA
ACGCAGGACTCGGTGCTGGGAGACATACTCAGCGTCTGTGGTGGGATGAT
TGGGCCGCTTTAGCAGCCGTGCCCTGGATCCTCGGCCTCTGCGGAGTGGC
ATTTGCTATGGGCTTCTATGGCCTCGGCCACCACGCTCAGTTTGTCGATT
CAAAGGATCTAGCCATCTTCCTTAGACTGTTGTATGCAGTATACTACGTC
TACGATATCGGCCTCTTTTTCACCAAGCTCTCTGCCATTCTGTTTCTCTC
GCGCATCTTTCCCTGGCACGCAAACTCCAAGTGGTTCAACTACACCATTG
TGGCTACCCACTGCCTCAACTGTGCATGGTTGGTCGGAATCATTTTTGGT
ACCACATTTATGTGCAATCCCGTGCAGAAGGGCTGGAATCCCACATTACC
TGGGCACTGCGGTACCACCAGCGCCCTTTGGCTTGGAAGCGCAATACCCA
GCGTCATCATTGACCTCATCATCCTGCTGCTGCCCGTGCCAAAGATCTGG
TCCCTGCAAATGACCACCACGCGCAAACTGGGCATCATTGGAGTCTTCGT
TATTGGTTACAGTGTCATTGTCGTTTCCCTTGGCCGACTCACTACAGTTC
TGCTGACTGGTAGTTCCTTGAACTCGGATATTACCTACACGGTTGTTCAT
CTGGCCTACTGGGTTGGTGCCGAGGCGCCCATCACTATGCTGTGTATTTG
CCTGCCGCCCATGACTACTCTGGGCCGGTATCTAGCCAACAACTACTTTT
CCAAGATATCCAGCAGAGTTCAGTCTCTGTTTAGCACCATTAAGGGCAGC
AGAGGCACTGTGGCATCACGGAGTTACTCCGCACCGGATTCGCAATCCCA
AAGTATTGCGATGCACAGGAGCTCCATGAAAAAGAGCGTTGACAATGACG
GCCACAGCCTAGAGTCACAGGAGAGCTCTGCGCATTTATTCCCCCACGAA
GACGCCAATTACTATGCTGGCGCTAGAGCCAATGTTTCTTACCCTCGCTC
GGGTACTCATGGTACAAGCCCGCTTCCGAACTCTGGCGACACTGGCATTC
GTGTAGACAGCATCGTGACTGTCACGCAACGTGTGAGGAAATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003976-T1.utr5p1 | KJC3_003976-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.6 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3581727..3583707 + |
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