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KJC3_003979-T1, KJC3_003979-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003979-T1
Unique NameKJC3_003979-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3588971..3590930+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003979-T1 ID=KJC3_003979-T1|Name=KJC3_003979-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1960bp|location=Sequence derived from alignment at ch3:3588971..3590930+ (Aspergillus niger KJC3)
TTACTCTATGTTGTGATCTACATTTACCCGGGAGAAACTTTCTGGATTCC
CCGTGCAAGCCCGTCAGCACGGCTGGTCAAATCCAGCCCACTCTTCCTTC
CAGGCTTAAATCCTTCCGATGCGACTACAGACGGATCAGTTGGCCAGGAA
CGTACCTGCATCATGCCGCCGACACAGACAACTGCTTCGTCTACAAGCGA
CAATGTTGAAAAGTCTCTACAGGATGCCACCGTCAGTGACCCGTCGGGGT
CTGCTGATGCTGTGACCGGGCGCAAGATCACGGGTGTTGCGTGGTTCGTT
GTCAACGTTGCCCTGTTATCGGCGACTTTTTTGTATGCCCTCGACAATAC
CGTGACAGCGACGGTGCGGCCTGCCATTGTCGACACATTTGGCAACCGCA
TAGACATGCTACCATGGGTTTCAGTGGCATATCCCATGGGTGAAGTTGGC
ACAAACCCCATCTGGTAAGATATATCAAGCAGCAGAGCGCACTTGGCGGC
TCGACTACTAACACTTCTGTTTACAGGGCAAAGCTCAACAAGTTCCTCAA
TGGCAAATTTGTCTTCCTCGCCGCCCTGCTTATCTTCGAGGTAGGATCTG
CGGTTATTGGCTCAGCGTCGTCCATTGGCGCTGTCATCGCGGGTCGCGCT
CTGGCTGGCTCTGGCGGCTCCGGCATCTACGTCGGCACCATTAGCATGAT
CACTGGAATGACGACTGCCAAAGAACAAAACCAGTATCTCAACATTGTCG
GCATGGCATGGAGCCTGGGAACCATTCTCGGCCCCATTATCGGATCTGCA
TTTGCTGATTCGCCTGCAACATGGCGATGGGCTTTTTACATCAACATCTG
CATTGCCGCCGTTGCCGCCCCCGCGTGTATCTGGATCATGCCTTCGGCGC
CCCCTAGCGTGTCTCTGGGGATCATGGATGTGATCAAGGCATTTGACCAT
CTGGGTGCTGTGCTGTTTCTTGGCTCGGTCGTGTCGACAGTCATGCTGCT
GGGCTTTGGGGGCGTCGTGTACAGCTGGGATAGTGGCCAGATGATTGGAC
TTTACGTTGCCACTGCTGTGCTATGGATCATGTTTGCTCTGCAGCAGAAG
TTCCACCTTCTCACGTCAGATCGTATCTTCCCCGTGCAGTTCTTCAAGGA
TCCCTTGGTGGTCGGCCTGTGGATCTGGACGATTGTCGCAATTTCTGACA
TCGTCGTCACCATCTACACGCTGCCGTTGTTTTTCCAGTTTGTGCTGCAT
GATTCTTCGATGCGTTCTGCAGTCTACACGCTGCCTTTTGTGGCATCCGT
TGTGGTCAGTGCCGGCATCAGCGGGGGCCTTCTGGTCAAGTTCCCGTGGT
ACAAATGCTGGTTCATCTGGGCCAGTGTGCTGCTCCTTATCAGCAACGGC
CTGCTGTCCAGCATCCACACGCACACATCTAGGGCTACCATTTGTGGCTA
TACCATCATCCAAGGCTTCGGCGTCGGACCGGTCATTCAGCTTGGCTATA
CTGTGGGCCAGTTGAAGCGTCCACAGGCGGCACGAAAGGATGTTACCGCG
TTCTTCTCTTGTGCGCAGATGGGTGGTCTAGCCTTGTCACTGGGCATCGC
CACCTCTGTTCTTGTCAACCATGCCACGGAGGAGATATCGCACATTCTAC
CAAACGTTCCGCTTAGCGAAATCAGAGGCGCCATTGATGGAGTGGGAAGT
AGCGTGTTCGCGACGTTGACCGAACAGGTTCGTGATCAGGTCACCAACGC
AGTTACCCAGAGTGTGGCCTCTGTGTTTTACCTGAATTTATTTGGTGCAG
CGCTTGGCTTCCTCATTGCCCTTCCTCTCAAATTCGACAAGCTGGATTTC
ACCGCGCTGCAATAACACACTTCCTCGTCTGCTCCAGGCTGACTGGGATC
TACGTCATAGTTTACTGTTAGTATGATAGAACTGTAATAATCTCAGTCCA
TAATAATTGC
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Coding sequence (CDS) from alignment at ch3:3588971..3590930+

>KJC3_003979-T1 ID=KJC3_003979-T1|Name=KJC3_003979-T1|organism=Aspergillus niger KJC3|type=CDS|length=3282bp|location=Sequence derived from alignment at ch3:3588971..3590930+ (Aspergillus niger KJC3)
ATGCCGCCGACACAGACAACTGCTTCGTCTACAAGCGACAATGTTGAAAA
GTCTCTACAGGATGCCACCGTCAGTGACCCGTCGGGGTCTGCTGATGCTG
TGACCGGGCGCAAGATCACGGGTGTTGCGTGGTTCGTTGTCAACGTTGCC
CTGTTATCGGCGACTTTTTTGTATGCCCTCGACAATACCGTGACAGCGAC
GGTGCGGCCTGCCATTGTCGACACATTTGGCAACCGCATAGACATGCTAC
CATGGGTTTCAGTGGCATATCCCATGGGTGAAGTTGGCACAAACCCCATC
TGGGCAAAGCTCAACAAGTTCCTCAATGGCAAATTTGTCTTCCTCGCCGC
CCTGCTTATCTTCGAGGTAGGATCTGCGGTTATTGGCTCAGCGTCGTCCA
TTGGCGCTGTCATCGCGGGTCGCGCTCTGGCTGGCTCTGGCGGCTCCGGC
ATCTACGTCGGCACCATTAGCATGATCACTGGAATGACGACTGCCAAAGA
ACAAAACCAGTATCTCAACATTGTCGGCATGGCATGGAGCCTGGGAACCA
TTCTCGGCCCCATTATCGGATCTGCATTTGCTGATTCGCCTGCAACATGG
CGATGGGCTTTTTACATCAACATCTGCATTGCCGCCGTTGCCGCCCCCGC
GTGTATCTGGATCATGCCTTCGGCGCCCCCTAGCGTGTCTCTGGGGATCA
TGGATGTGATCAAGGCATTTGACCATCTGGGTGCTGTGCTGTTTCTTGGC
TCGGTCGTGTCGACAGTCATGCTGCTGGGCTTTGGGGGCGTCGTGTACAG
CTGGGATAGTGGCCAGATGATTGGACTTTACGTTGCCACTGCTGTGCTAT
GGATCATGTTTGCTCTGCAGCAGAAGTTCCACCTTCTCACGTCAGATCGT
ATCTTCCCCGTGCAGTTCTTCAAGGATCCCTTGGTGGTCGGCCTGTGGAT
CTGGACGATTGTCGCAATTTCTGACATCGTCGTCACCATCTACACGCTGC
CGTTGTTTTTCCAGTTTGTGCTGCATGATTCTTCGATGCGTTCTGCAGTC
TACACGCTGCCTTTTGTGGCATCCGTTGTGGTCAGTGCCGGCATCAGCGG
GGGCCTTCTGGTCAAGTTCCCGTGGTACAAATGCTGGTTCATCTGGGCCA
GTGTGCTGCTCCTTATCAGCAACGGCCTGCTGTCCAGCATCCACACGCAC
ACATCTAGGGCTACCATTTGTGGCTATACCATCATCCAAGGCTTCGGCGT
CGGACCGGTCATTCAGCTTGGCTATACTGTGGGCCAGTTGAAGCGTCCAC
AGGCGGCACGAAAGGATGTTACCGCGTTCTTCTCTTGTGCGCAGATGGGT
GGTCTAGCCTTGTCACTGGGCATCGCCACCTCTGTTCTTGTCAACCATGC
CACGGAGGAGATATCGCACATTCTACCAAACGTTCCGCTTAGCGAAATCA
GAGGCGCCATTGATGGAGTGGGAAGTAGCGTGTTCGCGACGTTGACCGAA
CAGGTTCGTGATCAGGTCACCAACGCAGTTACCCAGAGTGTGGCCTCTGT
GTTTTACCTGAATTTATTTGGTGCAGCGCTTGGCTTCCTCATTGCCCTTC
CTCTCAAATTCGACAAGCTGGATTTCACCGCGCTGCAATAAATGCCGCCG
ACACAGACAACTGCTTCGTCTACAAGCGACAATGTTGAAAAGTCTCTACA
GGATGCCACCGTCAGTGACCCGTCGGGGTCTGCTGATGCTGTGACCGGGC
GCAAGATCACGGGTGTTGCGTGGTTCGTTGTCAACGTTGCCCTGTTATCG
GCGACTTTTTTGTATGCCCTCGACAATACCGTGACAGCGACGGTGCGGCC
TGCCATTGTCGACACATTTGGCAACCGCATAGACATGCTACCATGGGTTT
CAGTGGCATATCCCATGGGTGAAGTTGGCACAAACCCCATCTGGGCAAAG
CTCAACAAGTTCCTCAATGGCAAATTTGTCTTCCTCGCCGCCCTGCTTAT
CTTCGAGGTAGGATCTGCGGTTATTGGCTCAGCGTCGTCCATTGGCGCTG
TCATCGCGGGTCGCGCTCTGGCTGGCTCTGGCGGCTCCGGCATCTACGTC
GGCACCATTAGCATGATCACTGGAATGACGACTGCCAAAGAACAAAACCA
GTATCTCAACATTGTCGGCATGGCATGGAGCCTGGGAACCATTCTCGGCC
CCATTATCGGATCTGCATTTGCTGATTCGCCTGCAACATGGCGATGGGCT
TTTTACATCAACATCTGCATTGCCGCCGTTGCCGCCCCCGCGTGTATCTG
GATCATGCCTTCGGCGCCCCCTAGCGTGTCTCTGGGGATCATGGATGTGA
TCAAGGCATTTGACCATCTGGGTGCTGTGCTGTTTCTTGGCTCGGTCGTG
TCGACAGTCATGCTGCTGGGCTTTGGGGGCGTCGTGTACAGCTGGGATAG
TGGCCAGATGATTGGACTTTACGTTGCCACTGCTGTGCTATGGATCATGT
TTGCTCTGCAGCAGAAGTTCCACCTTCTCACGTCAGATCGTATCTTCCCC
GTGCAGTTCTTCAAGGATCCCTTGGTGGTCGGCCTGTGGATCTGGACGAT
TGTCGCAATTTCTGACATCGTCGTCACCATCTACACGCTGCCGTTGTTTT
TCCAGTTTGTGCTGCATGATTCTTCGATGCGTTCTGCAGTCTACACGCTG
CCTTTTGTGGCATCCGTTGTGGTCAGTGCCGGCATCAGCGGGGGCCTTCT
GGTCAAGTTCCCGTGGTACAAATGCTGGTTCATCTGGGCCAGTGTGCTGC
TCCTTATCAGCAACGGCCTGCTGTCCAGCATCCACACGCACACATCTAGG
GCTACCATTTGTGGCTATACCATCATCCAAGGCTTCGGCGTCGGACCGGT
CATTCAGCTTGGCTATACTGTGGGCCAGTTGAAGCGTCCACAGGCGGCAC
GAAAGGATGTTACCGCGTTCTTCTCTTGTGCGCAGATGGGTGGTCTAGCC
TTGTCACTGGGCATCGCCACCTCTGTTCTTGTCAACCATGCCACGGAGGA
GATATCGCACATTCTACCAAACGTTCCGCTTAGCGAAATCAGAGGCGCCA
TTGATGGAGTGGGAAGTAGCGTGTTCGCGACGTTGACCGAACAGGTTCGT
GATCAGGTCACCAACGCAGTTACCCAGAGTGTGGCCTCTGTGTTTTACCT
GAATTTATTTGGTGCAGCGCTTGGCTTCCTCATTGCCCTTCCTCTCAAAT
TCGACAAGCTGGATTTCACCGCGCTGCAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003979KJC3_003979Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003979-T1.utr5p1KJC3_003979-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003979-T1.exon1KJC3_003979-T1.exon1Aspergillus niger KJC3exon
KJC3_003979-T1.exon2KJC3_003979-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003979-T1.cdsKJC3_003979-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003979-T1.utr3p1KJC3_003979-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003979-T1KJC3_003979-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_3.6
NoteSMCOG1005: EmrB/QacA
NoteSMCOG1005:Drug resistance transporter
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3588971..3590930 +
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