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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3591375..3593535+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003980-T1 ID=KJC3_003980-T1|Name=KJC3_003980-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2161bp|location=Sequence derived from alignment at ch3:3591375..3593535+ (Aspergillus niger KJC3)
CCATCCCCCGCACCATCACATCCAACATTCCAACAACATGGGCATTTACA
CTCGGCTCCCCGAAGGCATCGACGAGGTCGACATCATCATCGCCGGCGGT
TTGTTCATCCACCTCTCCCCCTCTTCATAAGTTTATCCTAACGAGCTCTT
TTCCTCTCTTGTTAGGCGGTACCGCGGGGTGCGTCGTTGCGTCCAGGCTC
GCCGATGCCGACCCCTCGCTGTCCATCCTCGTAGTAGAGGGCGGACAGAA
CAATAAGGGCAACCACATGATTGCCTTCCCGCTCCTTTTCCCAACTGCAC
TACTTCCCACCAGTACCGCAACCCTGTTTTACAAGGGAAATGCGGAGCCC
CAGTTGGACAACCGCGAAATGATCGTCCCAACCGGTGGTGTTCTGGGCGG
CGGTTCGTCAATCAACTTGATGATGTACAGTCGTGCTCAACGCCACGATT
GGGATTCGTGGGCCACTCCGGGATGGTCCACGGATGAAATGATTCCTTAC
TTGAAGAAGGTAGGTGATTGGACTTGCGACTATGTGCAACAGTGTTGACC
TAACCTGTCATGACCTTGTTGTAGCTTGAGACGTATCAAGGCCCTGGCCC
GGATTCTGTTCATGGAAAAGATGGCCCTATTGTTGTGTCTAAGGGAACAT
TCTACTCTGAGCGTGCGGCAGATCAATTCATTGCTGCCGCCAACGAGGTA
GGGTACCCGACCGTCAACGATCTTCAAGACCTCGACACTAGCAACGGCGT
TCAACGTGCCCTCCGCTTTGTCGACTCAAAGGGCCGCCGCCAGGATGCCG
CCAGTAACTACCTGCATCCGAAGCTGGAAGATGGAGCACATCCGAACCTC
CACGTCCTCGTTGAGACCAAGGTTATCAAGATCCTTTTCGAGGGCAAACG
AGCGGTGGGTGTTGAGTTCAAGCCAAACCCTGCCTTCCAAAAGGAAGACA
ACAAGGTTCAACGCGTCAAGGCCAGGAAGCTCGTAATTGGTTCCTGTGGC
GCTCTCGGAACCCCATTGCTCCTCGAGAGGTCCGGTCTCGGCGACGAAGC
CATTCTCAACAAGGTTGGCGTTCCTGTTGTCGCCCATCTCCCTGGAATCG
GCCGGAACTACCAGGATCATCATCTCTTGATTCAAACATACCACAGTGCC
TTGGAGCCAAACGAGACGTTTGACGCCCCCCTGGCCGGTAGAATTAACAT
GGAAGAATTAATCAAGTCAAATGCACCAATTATGGGGTGGAATGGCCAAG
ATGCCTCCTGCAAGCTGCGTCCCACTGAGGCCGATGTCACTGCCCTGGGA
CCTGAATTCGAGGCGGCATACGCAAGAGACTACCTCCACACTCCCAACAA
GCCCCTGGCGCTAATGGCTTTGCTGGGCGGGTTCCCTGGTGACCCATCCA
CCGTTGAGCCAGGACAATACCTCGCGACCTCTTTGTTCACCGTCTACCCC
TACGCCAGAGGCCATGTCCACATCACAAGCCCCGACCCCGACGCGGATAT
CGCCTTTGAAACTGGATTCTTGAAAAGTGACTTGGATGTCAAAAAACTCA
TCTGGGCGTACAAGAAGCAGCGAGAAATCGTCCGCAGAATGGATGTATAC
CGCGGAGAGTTTGTTGGCGCCCATCCACCGTTTGCCGAGGATTCGGCCGC
GGCTCTTGTCAGGCTGGACAAGCCGAATGACAAGAACATTTCGGACATCC
AATACACTGCAGAGGACGACAAGGTCATTGAGGGCTGGGTGCGCAAGAAT
GTCGGCACTACCTGGCATTCACTCGGTACTTGCAGGATGGGCGCGCTGGC
TGATGGCGGCGTGGTTGATGCCGATCTCAATGTTCATGGGATTGAGGGCC
TGAAGCTCGTAGATCTGAGCATCATACCTCAGAACATTGGCGCGAACGCG
GCCACAACTGCTTATGCAATCGGTGAGAAGGCAGCTACTATTATTATGAA
AGACCTGGGGCTTCCTGTCAGCCAGTGAGCCGCCGCTCACTTTACTAGTG
TAATGGTCGGATGTGTGCACTGTTCCCACAACTGACATATTCTGTTTTGA
ATTATTGACATAGCCAAATATATGTATTCATCTTTTTTTTTTTTTTCTTT
AAAGAAATGTGCTATCTTACCACGATATTGTGGTGGGATTCTGTCTGTAT
GTAAGCTTGAC back to topCoding sequence (CDS) from alignment at ch3:3591375..3593535+ >KJC3_003980-T1 ID=KJC3_003980-T1|Name=KJC3_003980-T1|organism=Aspergillus niger KJC3|type=CDS|length=5427bp|location=Sequence derived from alignment at ch3:3591375..3593535+ (Aspergillus niger KJC3)
ATGGGCATTTACACTCGGCTCCCCGAAGGCATCGACGAGGTCGACATCAT
CATCGCCGGCGGCGGTACCGCGGGGTGCGTCGTTGCGTCCAGGCTCGCCG
ATGCCGACCCCTCGCTGTCCATCCTCGTAGTAGAGGGCGGACAGAACAAT
AAGGGCAACCACATGATTGCCTTCCCGCTCCTTTTCCCAACTGCACTACT
TCCCACCAGTACCGCAACCCTGTTTTACAAGGGAAATGCGGAGCCCCAGT
TGGACAACCGCGAAATGATCGTCCCAACCGGTGGTGTTCTGGGCGGCGGT
TCGTCAATCAACTTGATGATGTACAGTCGTGCTCAACGCCACGATTGGGA
TTCGTGGGCCACTCCGGGATGGTCCACGGATGAAATGATTCCTTACTTGA
AGAAGCTTGAGACGTATCAAGGCCCTGGCCCGGATTCTGTTCATGGAAAA
GATGGCCCTATTGTTGTGTCTAAGGGAACATTCTACTCTGAGCGTGCGGC
AGATCAATTCATTGCTGCCGCCAACGAGGTAGGGTACCCGACCGTCAACG
ATCTTCAAGACCTCGACACTAGCAACGGCGTTCAACGTGCCCTCCGCTTT
GTCGACTCAAAGGGCCGCCGCCAGGATGCCGCCAGTAACTACCTGCATCC
GAAGCTGGAAGATGGAGCACATCCGAACCTCCACGTCCTCGTTGAGACCA
AGGTTATCAAGATCCTTTTCGAGGGCAAACGAGCGGTGGGTGTTGAGTTC
AAGCCAAACCCTGCCTTCCAAAAGGAAGACAACAAGGTTCAACGCGTCAA
GGCCAGGAAGCTCGTAATTGGTTCCTGTGGCGCTCTCGGAACCCCATTGC
TCCTCGAGAGGTCCGGTCTCGGCGACGAAGCCATTCTCAACAAGGTTGGC
GTTCCTGTTGTCGCCCATCTCCCTGGAATCGGCCGGAACTACCAGGATCA
TCATCTCTTGATTCAAACATACCACAGTGCCTTGGAGCCAAACGAGACGT
TTGACGCCCCCCTGGCCGGTAGAATTAACATGGAAGAATTAATCAAGTCA
AATGCACCAATTATGGGGTGGAATGGCCAAGATGCCTCCTGCAAGCTGCG
TCCCACTGAGGCCGATGTCACTGCCCTGGGACCTGAATTCGAGGCGGCAT
ACGCAAGAGACTACCTCCACACTCCCAACAAGCCCCTGGCGCTAATGGCT
TTGCTGGGCGGGTTCCCTGGTGACCCATCCACCGTTGAGCCAGGACAATA
CCTCGCGACCTCTTTGTTCACCGTCTACCCCTACGCCAGAGGCCATGTCC
ACATCACAAGCCCCGACCCCGACGCGGATATCGCCTTTGAAACTGGATTC
TTGAAAAGTGACTTGGATGTCAAAAAACTCATCTGGGCGTACAAGAAGCA
GCGAGAAATCGTCCGCAGAATGGATGTATACCGCGGAGAGTTTGTTGGCG
CCCATCCACCGTTTGCCGAGGATTCGGCCGCGGCTCTTGTCAGGCTGGAC
AAGCCGAATGACAAGAACATTTCGGACATCCAATACACTGCAGAGGACGA
CAAGGTCATTGAGGGCTGGGTGCGCAAGAATGTCGGCACTACCTGGCATT
CACTCGGTACTTGCAGGATGGGCGCGCTGGCTGATGGCGGCGTGGTTGAT
GCCGATCTCAATGTTCATGGGATTGAGGGCCTGAAGCTCGTAGATCTGAG
CATCATACCTCAGAACATTGGCGCGAACGCGGCCACAACTGCTTATGCAA
TCGGTGAGAAGGCAGCTACTATTATTATGAAAGACCTGGGGCTTCCTGTC
AGCCAGTGAATGGGCATTTACACTCGGCTCCCCGAAGGCATCGACGAGGT
CGACATCATCATCGCCGGCGGCGGTACCGCGGGGTGCGTCGTTGCGTCCA
GGCTCGCCGATGCCGACCCCTCGCTGTCCATCCTCGTAGTAGAGGGCGGA
CAGAACAATAAGGGCAACCACATGATTGCCTTCCCGCTCCTTTTCCCAAC
TGCACTACTTCCCACCAGTACCGCAACCCTGTTTTACAAGGGAAATGCGG
AGCCCCAGTTGGACAACCGCGAAATGATCGTCCCAACCGGTGGTGTTCTG
GGCGGCGGTTCGTCAATCAACTTGATGATGTACAGTCGTGCTCAACGCCA
CGATTGGGATTCGTGGGCCACTCCGGGATGGTCCACGGATGAAATGATTC
CTTACTTGAAGAAGCTTGAGACGTATCAAGGCCCTGGCCCGGATTCTGTT
CATGGAAAAGATGGCCCTATTGTTGTGTCTAAGGGAACATTCTACTCTGA
GCGTGCGGCAGATCAATTCATTGCTGCCGCCAACGAGGTAGGGTACCCGA
CCGTCAACGATCTTCAAGACCTCGACACTAGCAACGGCGTTCAACGTGCC
CTCCGCTTTGTCGACTCAAAGGGCCGCCGCCAGGATGCCGCCAGTAACTA
CCTGCATCCGAAGCTGGAAGATGGAGCACATCCGAACCTCCACGTCCTCG
TTGAGACCAAGGTTATCAAGATCCTTTTCGAGGGCAAACGAGCGGTGGGT
GTTGAGTTCAAGCCAAACCCTGCCTTCCAAAAGGAAGACAACAAGGTTCA
ACGCGTCAAGGCCAGGAAGCTCGTAATTGGTTCCTGTGGCGCTCTCGGAA
CCCCATTGCTCCTCGAGAGGTCCGGTCTCGGCGACGAAGCCATTCTCAAC
AAGGTTGGCGTTCCTGTTGTCGCCCATCTCCCTGGAATCGGCCGGAACTA
CCAGGATCATCATCTCTTGATTCAAACATACCACAGTGCCTTGGAGCCAA
ACGAGACGTTTGACGCCCCCCTGGCCGGTAGAATTAACATGGAAGAATTA
ATCAAGTCAAATGCACCAATTATGGGGTGGAATGGCCAAGATGCCTCCTG
CAAGCTGCGTCCCACTGAGGCCGATGTCACTGCCCTGGGACCTGAATTCG
AGGCGGCATACGCAAGAGACTACCTCCACACTCCCAACAAGCCCCTGGCG
CTAATGGCTTTGCTGGGCGGGTTCCCTGGTGACCCATCCACCGTTGAGCC
AGGACAATACCTCGCGACCTCTTTGTTCACCGTCTACCCCTACGCCAGAG
GCCATGTCCACATCACAAGCCCCGACCCCGACGCGGATATCGCCTTTGAA
ACTGGATTCTTGAAAAGTGACTTGGATGTCAAAAAACTCATCTGGGCGTA
CAAGAAGCAGCGAGAAATCGTCCGCAGAATGGATGTATACCGCGGAGAGT
TTGTTGGCGCCCATCCACCGTTTGCCGAGGATTCGGCCGCGGCTCTTGTC
AGGCTGGACAAGCCGAATGACAAGAACATTTCGGACATCCAATACACTGC
AGAGGACGACAAGGTCATTGAGGGCTGGGTGCGCAAGAATGTCGGCACTA
CCTGGCATTCACTCGGTACTTGCAGGATGGGCGCGCTGGCTGATGGCGGC
GTGGTTGATGCCGATCTCAATGTTCATGGGATTGAGGGCCTGAAGCTCGT
AGATCTGAGCATCATACCTCAGAACATTGGCGCGAACGCGGCCACAACTG
CTTATGCAATCGGTGAGAAGGCAGCTACTATTATTATGAAAGACCTGGGG
CTTCCTGTCAGCCAGTGAATGGGCATTTACACTCGGCTCCCCGAAGGCAT
CGACGAGGTCGACATCATCATCGCCGGCGGCGGTACCGCGGGGTGCGTCG
TTGCGTCCAGGCTCGCCGATGCCGACCCCTCGCTGTCCATCCTCGTAGTA
GAGGGCGGACAGAACAATAAGGGCAACCACATGATTGCCTTCCCGCTCCT
TTTCCCAACTGCACTACTTCCCACCAGTACCGCAACCCTGTTTTACAAGG
GAAATGCGGAGCCCCAGTTGGACAACCGCGAAATGATCGTCCCAACCGGT
GGTGTTCTGGGCGGCGGTTCGTCAATCAACTTGATGATGTACAGTCGTGC
TCAACGCCACGATTGGGATTCGTGGGCCACTCCGGGATGGTCCACGGATG
AAATGATTCCTTACTTGAAGAAGCTTGAGACGTATCAAGGCCCTGGCCCG
GATTCTGTTCATGGAAAAGATGGCCCTATTGTTGTGTCTAAGGGAACATT
CTACTCTGAGCGTGCGGCAGATCAATTCATTGCTGCCGCCAACGAGGTAG
GGTACCCGACCGTCAACGATCTTCAAGACCTCGACACTAGCAACGGCGTT
CAACGTGCCCTCCGCTTTGTCGACTCAAAGGGCCGCCGCCAGGATGCCGC
CAGTAACTACCTGCATCCGAAGCTGGAAGATGGAGCACATCCGAACCTCC
ACGTCCTCGTTGAGACCAAGGTTATCAAGATCCTTTTCGAGGGCAAACGA
GCGGTGGGTGTTGAGTTCAAGCCAAACCCTGCCTTCCAAAAGGAAGACAA
CAAGGTTCAACGCGTCAAGGCCAGGAAGCTCGTAATTGGTTCCTGTGGCG
CTCTCGGAACCCCATTGCTCCTCGAGAGGTCCGGTCTCGGCGACGAAGCC
ATTCTCAACAAGGTTGGCGTTCCTGTTGTCGCCCATCTCCCTGGAATCGG
CCGGAACTACCAGGATCATCATCTCTTGATTCAAACATACCACAGTGCCT
TGGAGCCAAACGAGACGTTTGACGCCCCCCTGGCCGGTAGAATTAACATG
GAAGAATTAATCAAGTCAAATGCACCAATTATGGGGTGGAATGGCCAAGA
TGCCTCCTGCAAGCTGCGTCCCACTGAGGCCGATGTCACTGCCCTGGGAC
CTGAATTCGAGGCGGCATACGCAAGAGACTACCTCCACACTCCCAACAAG
CCCCTGGCGCTAATGGCTTTGCTGGGCGGGTTCCCTGGTGACCCATCCAC
CGTTGAGCCAGGACAATACCTCGCGACCTCTTTGTTCACCGTCTACCCCT
ACGCCAGAGGCCATGTCCACATCACAAGCCCCGACCCCGACGCGGATATC
GCCTTTGAAACTGGATTCTTGAAAAGTGACTTGGATGTCAAAAAACTCAT
CTGGGCGTACAAGAAGCAGCGAGAAATCGTCCGCAGAATGGATGTATACC
GCGGAGAGTTTGTTGGCGCCCATCCACCGTTTGCCGAGGATTCGGCCGCG
GCTCTTGTCAGGCTGGACAAGCCGAATGACAAGAACATTTCGGACATCCA
ATACACTGCAGAGGACGACAAGGTCATTGAGGGCTGGGTGCGCAAGAATG
TCGGCACTACCTGGCATTCACTCGGTACTTGCAGGATGGGCGCGCTGGCT
GATGGCGGCGTGGTTGATGCCGATCTCAATGTTCATGGGATTGAGGGCCT
GAAGCTCGTAGATCTGAGCATCATACCTCAGAACATTGGCGCGAACGCGG
CCACAACTGCTTATGCAATCGGTGAGAAGGCAGCTACTATTATTATGAAA
GACCTGGGGCTTCCTGTCAGCCAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003980-T1.utr5p1 | KJC3_003980-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003980-T1.utr3p1 | KJC3_003980-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.6 |
| Note | CAZy:AA3_2 |
| Note | CAZy:AA3 |
| Note | CAZy:AA3_3 |
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR007867 |
| DBxref | InterPro:IPR012132 |
| DBxref | InterPro:IPR000172 |
| DBxref | PFAM:PF00732 |
| DBxref | PFAM:PF05199 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3591375..3593535 + |
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