You are here

Home

KJC3_003983-T1, KJC3_003983-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003983-T1
Unique NameKJC3_003983-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3602624..3603465+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003983-T1 ID=KJC3_003983-T1|Name=KJC3_003983-T1|organism=Aspergillus niger KJC3|type=mRNA|length=842bp|location=Sequence derived from alignment at ch3:3602624..3603465+ (Aspergillus niger KJC3)
ACTAACCCTGAACGCAACATTCTTCCATCCATCCTTCATCCTCCTAACAA
TCCTATCCATCAATAATCATCCTCCCCTCGAATCAGTTCCATCAATCCAT
CCAGCCTACAAACCATAACCACAAATAGCAATCCTCCAAGCATGGCCCCA
GACCCATTCTCCCGCCAACATCCTGATGAGATCCACACCCCCAGCTGGCA
CGCAGCAAGCAATCGCCCCATCGTGGACGGCAAATACAACGATCCAGAAA
CCGGCGAAGTCCGAAATGCTACAGGCTTCGAGTTTTCCGGACCCCCTGCT
GTTGATGTTATCATTACAAATCTCCATGAGGACTCGTCCACCTCCGTCCG
GCGCGTTCAGCTCCCCTTTCGCGTGGAGGCGCTGCTAGTGTGGATCATGC
GTATAGTGGACGAACGCAAGCTACAGATAGACTCCCTGAATGCTACTCCG
TATGCTATTCGAGTTGTGCTTGCTCATGAGTTGAGTGGGGAGGAATTCGC
TGAAGTTGCTGATGTGATGGCGACGGGAATTTGGAATTACCGGCAGTAAA
GAATGCTGTGGAGTGGTGAGACTGGGATGGACAGAGTCGATAACGCTTGT
TTGCTTTTTTGCGGGGTGAGACCCCTAATATGGGGCAAAGGGTGTTTCTT
GGTCTGGTTATTGGCCTTCGGGCTAGACTGTCCGATTGGAAGTTCGACTG
GCGTGGGGTTGTCTGAAGACTCAATGCTGTGTAACCTACCTTTCGATAGT
CTTGGACTTTAATGAAGCATACTGCCCTATACGAGTTTTTATAACAGTAG
TCATTTTAGCGCGTTATATCTATAGCATTACTACTTAGGCAG
back to top

Coding sequence (CDS) from alignment at ch3:3602624..3603465+

>KJC3_003983-T1 ID=KJC3_003983-T1|Name=KJC3_003983-T1|organism=Aspergillus niger KJC3|type=CDS|length=408bp|location=Sequence derived from alignment at ch3:3602624..3603465+ (Aspergillus niger KJC3)
ATGGCCCCAGACCCATTCTCCCGCCAACATCCTGATGAGATCCACACCCC
CAGCTGGCACGCAGCAAGCAATCGCCCCATCGTGGACGGCAAATACAACG
ATCCAGAAACCGGCGAAGTCCGAAATGCTACAGGCTTCGAGTTTTCCGGA
CCCCCTGCTGTTGATGTTATCATTACAAATCTCCATGAGGACTCGTCCAC
CTCCGTCCGGCGCGTTCAGCTCCCCTTTCGCGTGGAGGCGCTGCTAGTGT
GGATCATGCGTATAGTGGACGAACGCAAGCTACAGATAGACTCCCTGAAT
GCTACTCCGTATGCTATTCGAGTTGTGCTTGCTCATGAGTTGAGTGGGGA
GGAATTCGCTGAAGTTGCTGATGTGATGGCGACGGGAATTTGGAATTACC
GGCAGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003983KJC3_003983Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003983-T1.utr5p1KJC3_003983-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003983-T1.exon1KJC3_003983-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003983-T1.cdsKJC3_003983-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003983-T1.utr3p1KJC3_003983-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003983-T1KJC3_003983-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3602624..3603465 +
Powered by Drupal