You are here

KJC3_003990-T1, KJC3_003990-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003990-T1
Unique NameKJC3_003990-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3620360..3621502+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003990-T1 ID=KJC3_003990-T1|Name=KJC3_003990-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1143bp|location=Sequence derived from alignment at ch3:3620360..3621502+ (Aspergillus niger KJC3)
ATGAAATCTGCCCTCCTCGCCTACGGCCTCCTGGCCTCCGCCAGCACGGT CACAGCCCACATCCAAATGTCCAACCCTTACCCGATCCGCAGCCCTCTCG ACCCCAACGGCGACGAGTCCAAAAAAGACTACTCATACACGAACCCCCTC GACTCTGACGGCAGCGACTACCCCTGCAAAGGCTACGCCAACGACCCCTT CCGCTCCGTAGCGAGCTACAGCCCTGGAGGCACCTACGAGCTGGACCTGC AAGGCAGCGCGACCCACGACGGCGGCTCATGCCAGATCTCGCTGTCGTAC GACACAGGGAAATCCTTCCAGGTGATCCACTCCATGTTGGGCGGGTGTCC GCTCACGGAATCGTACAAGTTCACGATTCCTTCGGATGCACCGACGGGCG ATGCGCTGCTCACTTGGACGTGGTTCAATAAGGTCGGCAACAGGGAGATG TATATGAACTGCGCACAGGTTACTATTGGAGATGGCAGTAAGAAGAGGGA TCTGGAGGAGATGCGGAAGCGAGATGCGTTTAGTTCGCTGCCGCCCATCT TCATTGCTAATGTTAATGGGCCTGGGCAGTGTACCACTATCGAGAACTAT GATGTGAACTTCCCCTTGCCGGGACCGTCGGTTGAGGGCAGTATCAATGG TACTGATGCTGGGTTTACTTGCACCGGGGATGCGCCTTTCTTGCATGCCA GTGGTAGCTCGTCGGGCTCGAGCTCGAGCTCGAGCTCTGGCTCTGGCGCC AGCTCTGTCAAGGCTGCCCCTGTGTCTACCTCCAAGCCGACTGTGTCTCG GCCCACTGTGTCAACCTCCAAGGTTGCTGCTCATGTTGCCAGCACACCCG CAGCGTCATCATCCGCTAAGGTGGTTGCTTCGTCGTTTGGAACTGAGGCA GCGCGTGTCGCGACCGTTGCCACGGCTGCTGCGCACTCTAATAATGATGC TACTGTTGCAGGTGCTGCTGCTGATGATGAGAGTGCCCGGTACGTGCCTG GCAAGCCCTGCGTCGATGGAGCCATTATCTGCGGTCCTGGTGGTACTAGC TGGTCGATGTGCAGCAATGGACGTCCTGTCCATATGGGATCTGTTGCGGC CGGGATGTACTGCTCTCATGGAGCGATGCAACGGTTGCGTTAA
back to top

Coding sequence (CDS) from alignment at ch3:3620360..3621502+

>KJC3_003990-T1 ID=KJC3_003990-T1|Name=KJC3_003990-T1|organism=Aspergillus niger KJC3|type=CDS|length=1143bp|location=Sequence derived from alignment at ch3:3620360..3621502+ (Aspergillus niger KJC3)
ATGAAATCTGCCCTCCTCGCCTACGGCCTCCTGGCCTCCGCCAGCACGGT
CACAGCCCACATCCAAATGTCCAACCCTTACCCGATCCGCAGCCCTCTCG
ACCCCAACGGCGACGAGTCCAAAAAAGACTACTCATACACGAACCCCCTC
GACTCTGACGGCAGCGACTACCCCTGCAAAGGCTACGCCAACGACCCCTT
CCGCTCCGTAGCGAGCTACAGCCCTGGAGGCACCTACGAGCTGGACCTGC
AAGGCAGCGCGACCCACGACGGCGGCTCATGCCAGATCTCGCTGTCGTAC
GACACAGGGAAATCCTTCCAGGTGATCCACTCCATGTTGGGCGGGTGTCC
GCTCACGGAATCGTACAAGTTCACGATTCCTTCGGATGCACCGACGGGCG
ATGCGCTGCTCACTTGGACGTGGTTCAATAAGGTCGGCAACAGGGAGATG
TATATGAACTGCGCACAGGTTACTATTGGAGATGGCAGTAAGAAGAGGGA
TCTGGAGGAGATGCGGAAGCGAGATGCGTTTAGTTCGCTGCCGCCCATCT
TCATTGCTAATGTTAATGGGCCTGGGCAGTGTACCACTATCGAGAACTAT
GATGTGAACTTCCCCTTGCCGGGACCGTCGGTTGAGGGCAGTATCAATGG
TACTGATGCTGGGTTTACTTGCACCGGGGATGCGCCTTTCTTGCATGCCA
GTGGTAGCTCGTCGGGCTCGAGCTCGAGCTCGAGCTCTGGCTCTGGCGCC
AGCTCTGTCAAGGCTGCCCCTGTGTCTACCTCCAAGCCGACTGTGTCTCG
GCCCACTGTGTCAACCTCCAAGGTTGCTGCTCATGTTGCCAGCACACCCG
CAGCGTCATCATCCGCTAAGGTGGTTGCTTCGTCGTTTGGAACTGAGGCA
GCGCGTGTCGCGACCGTTGCCACGGCTGCTGCGCACTCTAATAATGATGC
TACTGTTGCAGGTGCTGCTGCTGATGATGAGAGTGCCCGGTACGTGCCTG
GCAAGCCCTGCGTCGATGGAGCCATTATCTGCGGTCCTGGTGGTACTAGC
TGGTCGATGTGCAGCAATGGACGTCCTGTCCATATGGGATCTGTTGCGGC
CGGGATGTACTGCTCTCATGGAGCGATGCAACGGTTGCGTTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003990KJC3_003990Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003990-T1.exon1KJC3_003990-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003990-T1.cdsKJC3_003990-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003990-T1KJC3_003990-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:AA11
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3620360..3621502 +