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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3622042..3623901- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003991-T1 ID=KJC3_003991-T1|Name=KJC3_003991-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1860bp|location=Sequence derived from alignment at ch3:3622042..3623901- (Aspergillus niger KJC3)
GGCGGCCAGTCACCTGATCCGGCAGCGCCGATGCCGCATGAGATACAGCA
GAAAGTCAACTCTTGGGTTTACAACTTTCTGCTCCCAACGTCAATTCCAG
CTGCCTGATCTTCTCTTGATATACAGGTCCCTTCGCTGGTGTCGCCTGCC
TCCAACCTCTTCCTCCTCCATCCCTGTTCCCATCTTCCCACCCCCAATTC
CTTGCAATCCGATGGCGTTCGCACGTCTCGCCGCCCGGCGGTTGCCCGTC
GCCCGTCGGCTCGTCCCCAGCATTGACTCACTGCCTCAGCAGCGATTCTT
CTCCATGTCGCAACATGTGAAGTCTCAGAACAAGGCTTCTGTCCCGAACC
CCGATCCTGCTGCTGACTCCGTATCGGTCGCTTTCGTCAATGATCAATCT
CCCTACATGTTGCCGACCTACGTGCGGCCGGCGCCGGTCATGGTCAAGGG
CCAGGGATGTTATCTGTGGGATATGGAGAACCGGAAATACCTCGACTTGA
CAGCTGGTATCGCGGTCAACTCTCTGGGACACTGTGACCCCGAGGTGGCC
CAGATCATCGCTGAACAAGCCGAGGTGCTTGTCCACGCCTCGAACCTCTA
CTACAATGCGTGGACTGGAGCTCTGAGCAAGCTCTTGATCGACGTTACTC
AGAAGTCCGGTGCCATGCGCGATGCCTCTCAGGTCTTTATCTGCAACTCT
GGAACCGAAGCCAACGAGGCCGCCATCAAGTTTGCCCGCAAGGTCGGTCG
TTCGCTCGACCCCTCCGGCGCAAAGCACGAAGTCGTCTCCTTCCACAACT
CCTTCCACGGCCGCACCATGGGTGCTCTTTCTGCGACCCCGAACCCCAAG
TACCAGACTCCCTTCTCCCCCATGCTGCCTGGCTTCAAGTACGGCAACTA
CAACGATGTGGCTCAGCTCGAGAGTCTCGTCACTGAGAAGACTTGTGGTG
TGATCGTCGAACCCATCCAGGGTGAGGGAGGTATCAATGTGGCTACCCCT
GAATTCCTGGTTGCTCTGCGCAAGCGCTGTGACGAGGTTGGCGCCGTTTT
GATTTTCGACGAGATCCAGTGCGGTCTCTCCCGCACCGGCTCCTTCTGGG
CTCACGCCCACCCGTCTCTGGCGCCTGCTTCTGGCGAGGCCGCTCACCCC
GACATCCTGACTTCTGCCAAGGCCCTGGGTAACGGTATCCCTATCGGTGC
GACTATTGTCTCCGAGAAGACCGTGGCCAAACACATCAAGCCCGGTGACC
ACGGTACCACCTATGGTGGAAACCCCCTGGTGTGCCGTGTCGCCCATCAC
ATTGTCAACCGTTTGGCGGACCCCGAGCTGCAGAAGTCTGTTGAGATCAA
GGGAGACCTGCTGGTGTCTGGATTCAAGGATCTCCAGAAGAAGTTCCCCA
ACGTCATCTCGGAAATTCGCGGACGGGGATTGATCCGTGGTCTCCAGCTC
TCCCCGGAGTTCGTCTCCAAGGCCGGTGATTTGGTTGGTGCTGCCCGGGA
GCGCGGCATGCTGATTATCACGGCAGGTGAGGGCTGCATCCGCTTTGTTC
CTCCCTTGACCATCACCGAGGAGCAGATCAAGTCCGGCCTCAAGATTCTG
GAGCAGGCTCTGGAAGCCGTGGTTGCTCAGGCTTAAATTGGTCCGCGAGT
GTTCCCAAAACGATCTACAACTAAAAGTTAATTACTGTTTCTCGGTCTGT
GCATATATTCTACCTGTGACGTGACATGATCTATGCTACTGGATCCCGGG
ACATTTATATCTATGTTATTTCTTATTTTGATACCTGCTACATTGGTACA
TAGACGGCGGGATAGAACTTAGAATTGACGATAAATTCAAGGCTATACAT
TGATCGTGTA back to topCoding sequence (CDS) from alignment at ch3:3622042..3623901- >KJC3_003991-T1 ID=KJC3_003991-T1|Name=KJC3_003991-T1|organism=Aspergillus niger KJC3|type=CDS|length=1599bp|location=Sequence derived from alignment at ch3:3622042..3623901- (Aspergillus niger KJC3)
ATGAGATACAGCAGAAAGTCAACTCTTGGGTTTACAACTTTCTGCTCCCA
ACGTCAATTCCAGCTGCCTGATCTTCTCTTGATATACAGGTCCCTTCGCT
GGTGTCGCCTGCCTCCAACCTCTTCCTCCTCCATCCCTGTTCCCATCTTC
CCACCCCCAATTCCTTGCAATCCGATGGCGTTCGCACGTCTCGCCGCCCG
GCGGTTGCCCGTCGCCCGTCGGCTCGTCCCCAGCATTGACTCACTGCCTC
AGCAGCGATTCTTCTCCATGTCGCAACATGTGAAGTCTCAGAACAAGGCT
TCTGTCCCGAACCCCGATCCTGCTGCTGACTCCGTATCGGTCGCTTTCGT
CAATGATCAATCTCCCTACATGTTGCCGACCTACGTGCGGCCGGCGCCGG
TCATGGTCAAGGGCCAGGGATGTTATCTGTGGGATATGGAGAACCGGAAA
TACCTCGACTTGACAGCTGGTATCGCGGTCAACTCTCTGGGACACTGTGA
CCCCGAGGTGGCCCAGATCATCGCTGAACAAGCCGAGGTGCTTGTCCACG
CCTCGAACCTCTACTACAATGCGTGGACTGGAGCTCTGAGCAAGCTCTTG
ATCGACGTTACTCAGAAGTCCGGTGCCATGCGCGATGCCTCTCAGGTCTT
TATCTGCAACTCTGGAACCGAAGCCAACGAGGCCGCCATCAAGTTTGCCC
GCAAGGTCGGTCGTTCGCTCGACCCCTCCGGCGCAAAGCACGAAGTCGTC
TCCTTCCACAACTCCTTCCACGGCCGCACCATGGGTGCTCTTTCTGCGAC
CCCGAACCCCAAGTACCAGACTCCCTTCTCCCCCATGCTGCCTGGCTTCA
AGTACGGCAACTACAACGATGTGGCTCAGCTCGAGAGTCTCGTCACTGAG
AAGACTTGTGGTGTGATCGTCGAACCCATCCAGGGTGAGGGAGGTATCAA
TGTGGCTACCCCTGAATTCCTGGTTGCTCTGCGCAAGCGCTGTGACGAGG
TTGGCGCCGTTTTGATTTTCGACGAGATCCAGTGCGGTCTCTCCCGCACC
GGCTCCTTCTGGGCTCACGCCCACCCGTCTCTGGCGCCTGCTTCTGGCGA
GGCCGCTCACCCCGACATCCTGACTTCTGCCAAGGCCCTGGGTAACGGTA
TCCCTATCGGTGCGACTATTGTCTCCGAGAAGACCGTGGCCAAACACATC
AAGCCCGGTGACCACGGTACCACCTATGGTGGAAACCCCCTGGTGTGCCG
TGTCGCCCATCACATTGTCAACCGTTTGGCGGACCCCGAGCTGCAGAAGT
CTGTTGAGATCAAGGGAGACCTGCTGGTGTCTGGATTCAAGGATCTCCAG
AAGAAGTTCCCCAACGTCATCTCGGAAATTCGCGGACGGGGATTGATCCG
TGGTCTCCAGCTCTCCCCGGAGTTCGTCTCCAAGGCCGGTGATTTGGTTG
GTGCTGCCCGGGAGCGCGGCATGCTGATTATCACGGCAGGTGAGGGCTGC
ATCCGCTTTGTTCCTCCCTTGACCATCACCGAGGAGCAGATCAAGTCCGG
CCTCAAGATTCTGGAGCAGGCTCTGGAAGCCGTGGTTGCTCAGGCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006525 | arginine metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0008483 | transaminase activity |
| GO:0030170 | pyridoxal phosphate binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003991-T1.utr3p1 | KJC3_003991-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003991-T1.utr5p1 | KJC3_003991-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262OX9 |
| DBxref | InterPro:IPR015424 |
| DBxref | InterPro:IPR015422 |
| DBxref | InterPro:IPR004636 |
| DBxref | InterPro:IPR015421 |
| DBxref | InterPro:IPR005814 |
| DBxref | PFAM:PF00202 |
| Product | acetylornithine aminotransferase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3622042..3623901 - |
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