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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3623914..3627521+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003992-T1 ID=KJC3_003992-T1|Name=KJC3_003992-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3608bp|location=Sequence derived from alignment at ch3:3623914..3627521+ (Aspergillus niger KJC3)
CTCCGCTTTTAATAGATTGATAAGAGTAGCATAGCGGGTCTATGCTTTAC
ACATTGAAAAGAAATGTCTTACATCTAGACTAGGCTTTGCCTTGAACACC
AGACAAAAGTAGACAGTTGTACCCCCGTTACTGTTAGACATGGGAAATTA
CACCTCAAACTTACCCCCAAGTCGCTCCAATTTCTCCGCATTTCAGGCAC
TTTTCCCATTATATGAGTATATTAAGCACCCCCACGGAATGTAAGCACCG
ATTCACGAATCCTGGTCTCTGGCACCTAGGCAAGACTTCGTTCCATCTTC
AGCACGAACTTCAACATGAGGCATGGTCCGGTAGGGCTACTTTTGTGAAA
GTACCAAGCATTGGGGGGTTTTCTGATGGGTAATTTATTTCTTCCATAGA
AAGTATTGGCTGGATTAGACAAACTGTTTGTTCTCAGAATGAAAGCCGGA
GGCTCTGGTAACTTTCTGTGATTGTCAGTCATAGCAATGATTTTTAAATC
ACCCACGGCTTCAGCGTGGGATACACTTCGGACGCAAAGCATAATCCTAG
TGACTTGCGCGCAGTATAACACTGCTAATAATTCACTCGGCCGGAAGTTG
TCCGCGGTCACGTGCCAACAGCGTTGGCAACGCAGCGCTCCGAAAATGGA
ATAAGCAAGCCTGCAACTGTGTATCGCAACTGTATCACTGGCTTCCAGAG
GTCCATCACTTGCCGACAGAACAGCCGTGATATGTTCGACAGTTGGATGT
TAAGTGCTGAGTAATGCATGGACAAGAATTGGAAGAGTCAGGTAACTGGT
CAACGAAGGATTGCAGGAGTCATGTGGAAGGCGCCAGGAAGGCAGGCGGT
GGGGCGGCGCAATATGACGCGGCATCACATGTCAGAGCGATCGAATTAGG
TTGAGGCGGAAAAGAGGTTAGAAGGTGAGAGAGAGCAGCTGTTGGTACGA
TGGAGTAATTAGGCGCCGGGCAGGATTGGATTCAGTACTTTCCACGACTG
GATGGTGAGACGAGTCATGATTCATGGGCTGCGAACGTGAAAACCCACGG
CCGACATCCGAGTCGCGGCGCATGTGACACCTGCCAGCAGAAATCAGAGT
CCTCTTAGCAAGTTCCGGACATCGTAAGTTTGACTTGGATGGAAGGAGAG
GGAAAGCACATGTGCATGCGAGACAGTATGACAATGTTGTAAAAACCTGG
TAGTCAGTAAGGATGGATACTGTAGGTAGATGGGGAGAGTTGAAGCCATT
CCTTTGGTTAGTAAACTGCCAGTCAGCGCGGGGGAAGAATTTCCCAGCGC
GGGAGTGTGATTGCACGTGAAAGTGCCCCAACCTCAGCAGAAAGCAAGCA
ATCAATTATCATCGCAACCAGACACTTCCGACAAGGGATCTTCGTCCCTC
CTCCCACGCCCATTGCGAACCGATCTTACTCCTCAATTCTTGCCCTCCCC
TTACTCCCACTAGAGCCAATTTCAGGCTCCATCCATTGCCCTCTTTCCTT
TTTCGGGCCCTCCGGGCAGCCATGGACTACCGCTCCAACGGCAGGTCGGT
CCCGAAAACCTCCCTCTGTGAGCGCCCAGACGCCGTCTCAGCGCCCACTG
GCCCTCATACTTCAGCGCTATCTACTGCCTCACCCTCAACCGACTCCTCA
TCTGACTCGGCCCCTCCCACTGCCTATCCCCCTTTTCATCATGTTCCTCC
CCCCATGATGGACGTCGATCATTCTACCGTAGCGGAAGACCGTTCACGTC
GAGCCACCAGTGTACTATCCATGGATGATATCGAAGCCGCCCAAGCCCTG
GAGGGCCTTCGCACTGGTATGTCTTTTCTTCCTCCCTTGGCCCTTGGCCT
GTCCAGGACGAGTTTAACAGTCGATGGTATCAGACTACGGTCAATCGCCG
CGAACGTCGCAGATGAACCGCCCCGAATCCAAGCAGCAACCAGAGCCGCT
CCTGTCCCTTCTCACCTCCACCCATCCTCTTATCTCATCCGCTATAAACG
GCTCGGTGTCTGCCTATGCAAATTCCAAATCCTATTCCCCTCGTTTCAAA
TCCAGCGCCGAATTCCTCGAGCGCAACATTGGCTCTCCCGTCGCCAACAC
GGTTGGCACCGTGGGCCGGAAGACTGGCGTGGAAAGTGGCCTTCGGTGGG
CGTTACAGCGTCGGGTATCCTCGTCAGCCCAGTCTAGTCGTTCTAAACGC
CGTAAGGTTAGCAGCGAGCAACAGTCTACGGAGGTCGACGTAGAGAAGGG
CCCAGATCTGGCGATGAGGCTGTCGCCGGGAGAGGGTCCCCCACCCTACG
ATGATCAGAGGTCTCCCAATTATGACGAGATCGGTCGAGACAGTCCGTCG
CGGCAGACTCCGTCCACATGGCAGAGTCGACTGATGATCTCGACATCCGG
CCTGGGCGTGGCGATGAGTGAGGAATCGCTCCGAAGCCTGCAGTATTGTC
TGACTTGGCTGCGCTGGGCGAATGGACGGCTGGACAAAGCGATTGAGGCC
CTCAAGGCCGCCCTGAAAGAATGGGATAGCTCAAGGCAGCAGAATGGGGA
TTCTACTGCAGAGCAGGACGCTTCCAGCACCACCGTCCTCTCGAATCGCA
TCCAGGCCGTCAAGGCGGATGTGCTGGCGACGCTGAAACGCGTGGTGGAC
ATTGTCTCGAAATATGCCGGGGGAGCGCTCCCGGAGAATGCACGGAACTT
GGTGCGTCGGCATCTTACCTCACTGCCGCATCGGTTCCAGATCGCGTCGA
ACTCCAACCCGCCGCCAGATTCCATGGCGGCGGCATCGGACGCCACCGTC
AGCGCCCATCGCATCCTCGTCTTGGCCCAGGAGGGCTTGGATATGATGTC
GCAGGTCAGCGGCGTAGTTAACGACACTCTGGTCAGCGCTGAGCATTGGT
GTGAAAAATTGGGTCGGAAGCGCTCAGAGGGCAAGGCGCCGATCGAGGCT
CCGCCCCGAGAGCACGATGAGCCGTACCCGGCGGATATCAAAGTTCCAGT
TCAGGAGCCATCCCCTCGAGATGTCTCCATGACAGGAATGGAGAAGGTTT
AGTGATGCTATCAGCGCTCGGCACCGTACGATGCAGGCCACTGCTCCCGT
GCTTCTGCACCAGTCTGATGAATGATCATAGTTCTTCACTTATTACACGA
GGTCTGATTACCTCCCTTCTTTACCTCTTTGTTTCTTTGTGTTATTCTTA
TTGGTCACTGTATCGCATTTAGTTCTGCTGTTTGCAGCTTCCTTGACCAC
TCCTTGATATCACTGTTTTTCTTTTCTCCTGCGGCGGATGAATGGCGTTT
CTCTTGTTTGACTGGCTGGGCGGTTGGGTTGGAACTGGATACCTGGATTG
TTTGTTAAATCCAACCTGGTGCATCTCTCTTTCCTGTGATACCACCCTTT
TCTATGAACCTACACAGTACAATGATGGCTCCAGTGATGAAAAGTTCATG
ACTTGAATCTGCTTTATTCCTCTCATGCACCGACTTGAATTGGAGCTCTC
CCGATGCCCTTGGTTGGATGTAATGATCCGGGAATCGGCCGACTCCCAGT
GTGAGCGTTTGTGCTAATGAATATTTGATTCTGAGTATGCGTAAATATCT
ACCTTGTC back to topCoding sequence (CDS) from alignment at ch3:3623914..3627521+ >KJC3_003992-T1 ID=KJC3_003992-T1|Name=KJC3_003992-T1|organism=Aspergillus niger KJC3|type=CDS|length=2928bp|location=Sequence derived from alignment at ch3:3623914..3627521+ (Aspergillus niger KJC3)
ATGGACTACCGCTCCAACGGCAGGTCGGTCCCGAAAACCTCCCTCTGTGA
GCGCCCAGACGCCGTCTCAGCGCCCACTGGCCCTCATACTTCAGCGCTAT
CTACTGCCTCACCCTCAACCGACTCCTCATCTGACTCGGCCCCTCCCACT
GCCTATCCCCCTTTTCATCATGTTCCTCCCCCCATGATGGACGTCGATCA
TTCTACCGTAGCGGAAGACCGTTCACGTCGAGCCACCAGTGTACTATCCA
TGGATGATATCGAAGCCGCCCAAGCCCTGGAGGGCCTTCGCACTGACTAC
GGTCAATCGCCGCGAACGTCGCAGATGAACCGCCCCGAATCCAAGCAGCA
ACCAGAGCCGCTCCTGTCCCTTCTCACCTCCACCCATCCTCTTATCTCAT
CCGCTATAAACGGCTCGGTGTCTGCCTATGCAAATTCCAAATCCTATTCC
CCTCGTTTCAAATCCAGCGCCGAATTCCTCGAGCGCAACATTGGCTCTCC
CGTCGCCAACACGGTTGGCACCGTGGGCCGGAAGACTGGCGTGGAAAGTG
GCCTTCGGTGGGCGTTACAGCGTCGGGTATCCTCGTCAGCCCAGTCTAGT
CGTTCTAAACGCCGTAAGGTTAGCAGCGAGCAACAGTCTACGGAGGTCGA
CGTAGAGAAGGGCCCAGATCTGGCGATGAGGCTGTCGCCGGGAGAGGGTC
CCCCACCCTACGATGATCAGAGGTCTCCCAATTATGACGAGATCGGTCGA
GACAGTCCGTCGCGGCAGACTCCGTCCACATGGCAGAGTCGACTGATGAT
CTCGACATCCGGCCTGGGCGTGGCGATGAGTGAGGAATCGCTCCGAAGCC
TGCAGTATTGTCTGACTTGGCTGCGCTGGGCGAATGGACGGCTGGACAAA
GCGATTGAGGCCCTCAAGGCCGCCCTGAAAGAATGGGATAGCTCAAGGCA
GCAGAATGGGGATTCTACTGCAGAGCAGGACGCTTCCAGCACCACCGTCC
TCTCGAATCGCATCCAGGCCGTCAAGGCGGATGTGCTGGCGACGCTGAAA
CGCGTGGTGGACATTGTCTCGAAATATGCCGGGGGAGCGCTCCCGGAGAA
TGCACGGAACTTGGTGCGTCGGCATCTTACCTCACTGCCGCATCGGTTCC
AGATCGCGTCGAACTCCAACCCGCCGCCAGATTCCATGGCGGCGGCATCG
GACGCCACCGTCAGCGCCCATCGCATCCTCGTCTTGGCCCAGGAGGGCTT
GGATATGATGTCGCAGGTCAGCGGCGTAGTTAACGACACTCTGGTCAGCG
CTGAGCATTGGTGTGAAAAATTGGGTCGGAAGCGCTCAGAGGGCAAGGCG
CCGATCGAGGCTCCGCCCCGAGAGCACGATGAGCCGTACCCGGCGGATAT
CAAAGTTCCAGTTCAGGAGCCATCCCCTCGAGATGTCTCCATGACAGGAA
TGGAGAAGGTTTAGATGGACTACCGCTCCAACGGCAGGTCGGTCCCGAAA
ACCTCCCTCTGTGAGCGCCCAGACGCCGTCTCAGCGCCCACTGGCCCTCA
TACTTCAGCGCTATCTACTGCCTCACCCTCAACCGACTCCTCATCTGACT
CGGCCCCTCCCACTGCCTATCCCCCTTTTCATCATGTTCCTCCCCCCATG
ATGGACGTCGATCATTCTACCGTAGCGGAAGACCGTTCACGTCGAGCCAC
CAGTGTACTATCCATGGATGATATCGAAGCCGCCCAAGCCCTGGAGGGCC
TTCGCACTGACTACGGTCAATCGCCGCGAACGTCGCAGATGAACCGCCCC
GAATCCAAGCAGCAACCAGAGCCGCTCCTGTCCCTTCTCACCTCCACCCA
TCCTCTTATCTCATCCGCTATAAACGGCTCGGTGTCTGCCTATGCAAATT
CCAAATCCTATTCCCCTCGTTTCAAATCCAGCGCCGAATTCCTCGAGCGC
AACATTGGCTCTCCCGTCGCCAACACGGTTGGCACCGTGGGCCGGAAGAC
TGGCGTGGAAAGTGGCCTTCGGTGGGCGTTACAGCGTCGGGTATCCTCGT
CAGCCCAGTCTAGTCGTTCTAAACGCCGTAAGGTTAGCAGCGAGCAACAG
TCTACGGAGGTCGACGTAGAGAAGGGCCCAGATCTGGCGATGAGGCTGTC
GCCGGGAGAGGGTCCCCCACCCTACGATGATCAGAGGTCTCCCAATTATG
ACGAGATCGGTCGAGACAGTCCGTCGCGGCAGACTCCGTCCACATGGCAG
AGTCGACTGATGATCTCGACATCCGGCCTGGGCGTGGCGATGAGTGAGGA
ATCGCTCCGAAGCCTGCAGTATTGTCTGACTTGGCTGCGCTGGGCGAATG
GACGGCTGGACAAAGCGATTGAGGCCCTCAAGGCCGCCCTGAAAGAATGG
GATAGCTCAAGGCAGCAGAATGGGGATTCTACTGCAGAGCAGGACGCTTC
CAGCACCACCGTCCTCTCGAATCGCATCCAGGCCGTCAAGGCGGATGTGC
TGGCGACGCTGAAACGCGTGGTGGACATTGTCTCGAAATATGCCGGGGGA
GCGCTCCCGGAGAATGCACGGAACTTGGTGCGTCGGCATCTTACCTCACT
GCCGCATCGGTTCCAGATCGCGTCGAACTCCAACCCGCCGCCAGATTCCA
TGGCGGCGGCATCGGACGCCACCGTCAGCGCCCATCGCATCCTCGTCTTG
GCCCAGGAGGGCTTGGATATGATGTCGCAGGTCAGCGGCGTAGTTAACGA
CACTCTGGTCAGCGCTGAGCATTGGTGTGAAAAATTGGGTCGGAAGCGCT
CAGAGGGCAAGGCGCCGATCGAGGCTCCGCCCCGAGAGCACGATGAGCCG
TACCCGGCGGATATCAAAGTTCCAGTTCAGGAGCCATCCCCTCGAGATGT
CTCCATGACAGGAATGGAGAAGGTTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003714 | transcription corepressor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003992-T1.utr5p1 | KJC3_003992-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003992-T1.utr3p1 | KJC3_003992-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013927 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3623914..3627521 + |
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