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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3630904..3632997- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003995-T1 ID=KJC3_003995-T1|Name=KJC3_003995-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2094bp|location=Sequence derived from alignment at ch3:3630904..3632997- (Aspergillus niger KJC3)
CACCAACACTACTAACTGGGACAGCTGCAACATCCGTCTTCTTGACGGAT
TCACCAGAATAACCCTCCAGTGACCTCATCCACCACAAGAAACTATATTA
TCCTCGAAGTCTGCGAAACCGAGCCATGGACTAATCCATTGTTGCATTAT
CATCTTCACACCATTCTTGCTTCCAACGCTAGCAACAAAACTTGAGATCT
TCGCAGCAATGGACGAGGTCAGCCCCATTGCCGAGCTCCTGGGCCAGGCA
ATCTACCAATTTACACAGATCAAACCTTTGTTACCAACCTACGGACATCT
GCTTGTCTCTGCGCTCTTTCCCATCTACATCGGCGCCCATGCATCCCTGT
CAAGACCGTCTTCGGCCGCGAAACCTGAGAAATCGGAGGAAGATGGAGAC
GAATCAGAAGAAGAAGCTGGTGGTATTCAGAAGATGGAGGGCCTTGCACC
AAGTGATGCATTGATGTTTCCACTGACAGCTGGTTTAACCCTCGGGGGCT
TGTATCTGGTCATTAAGCACATGGGCGCTGATCTGCTGAATAAGATTCTT
GGCTACTATTTCTCCCAGATGGGTATGCTCTTTGCTATCGCCTTCCTGAA
AGACTCTTTTGCTGTCGTGCGGTCATTCGTCTTCCCCCGCGAGTACAGCA
GCTCTGGCAAGATATGGAAGCGGAGATCCACCCAACGGGTTTTTGAAAGC
GCTTCCGAAGGTGTCTCTAGATTGGAGTCTTCGGAGGTGGGAATCCGGAA
CTCTCCCCTTCCTGGGTTCTGGGGGTCAATCCCATTGCCGCATACTGCTC
GCGCAGCACTCTGGACTTGCCGTGAAATAGTATATTGGCGCGCTAAGCTT
AGAATCCATATACATCGTGTTCTCCGCACTGAATGCTGGCTTAGTATCTT
GGACATTATCAGCATAGCTGTATCATTCCCTACAATTGGTTACTTCACTT
TTGTGTCCAAACCATGGTGGTTGACCAACTTCCTGGGATTCAGTTTCTGC
TATGGCACCCTGCAATTTATGTCGCCGTCTACTTTCATCACCGGATCGCT
GATCCTGGGATCTTTGTTCTTCTATGACATCTATTTTGTCTATTTCACCC
CACTGATGGTGACGGTCGCAAAGACACTAGACGTCCCGATCAAGCTCCTG
TTTCCGCGCCCTGCAGCGCCTGGGGAGGCACCCGATACTATCTCCCTTGC
TATGCTGGGACTGGGCGACATCATCATTCCCGGTATGATGGTAGGCCTGG
CACTCCGGTTCGATCTTTATCTCTACTACAAGCGCAAGGGCCAGCAAAAG
GCGCGAGCAGAGGGCAAGGACTCGGAAATAGTCAAGCCTGTATATCAGTC
CGCGCTGGGAGGATGGGGAGAACGGTTCTGGACCCGTTCAGTGGTACCAA
GCAAGCCGCAGCTGGACCCTCCCTACCACAACGCCCGATCTTTCCCCAAG
CCTTATTTCACCGCCAGTCTCATTGGATATGTCATGGGTATGCTTGCGAC
TCTGATCGTAATGCAGGTGTTTGACCATCCCCAGCCTGCGCTCCTGTACC
TTGTACCTGGGGTTTTGATCTCTCTGTGGGGAACTGCATTGGTGAGAAAG
GAGATCCAAGAGATGTGGGAGTTTAGCGATGCGGAAGAAGACGAGGAACA
GGAGCCCACAGATGATAAGCAAGCAAAGGATTCGGTCGAGACTGGCGGGC
AAGCATCTCTTTTCTCCCGGATATTTTCCAAATCTCATGATGCCGCGTCG
AATAATGCTTCCAAGGAAACTGCAGAGAGACAGGCGTCGGAGGAATCCGC
CAAAGACGAGGATGATACCACGAAAAACTTCGAGTTATTCACCATTTCCT
TGTACTATCCTCGGAAGCAACAGCAACAGTCTGACAAGACTCAGAAGCCC
ACAGAGCGTGTTTCGTCCCCGGAGGACGATGAAAATTGGGCCATTGTTGG
TGCTGACCGGGATGCTGAACCGCCCGCGAAGCGCCTGCGTCGGAGTCCCA
GACATGCAGCCGACCAGAAATAAGAAGCTGCGCAGCCACTACCAAATCAT
GATTTCAATAACGCTATAGTGAAAATTAAACATTAGATTGTTCC back to topCoding sequence (CDS) from alignment at ch3:3630904..3632997- >KJC3_003995-T1 ID=KJC3_003995-T1|Name=KJC3_003995-T1|organism=Aspergillus niger KJC3|type=CDS|length=1815bp|location=Sequence derived from alignment at ch3:3630904..3632997- (Aspergillus niger KJC3)
ATGGACGAGGTCAGCCCCATTGCCGAGCTCCTGGGCCAGGCAATCTACCA
ATTTACACAGATCAAACCTTTGTTACCAACCTACGGACATCTGCTTGTCT
CTGCGCTCTTTCCCATCTACATCGGCGCCCATGCATCCCTGTCAAGACCG
TCTTCGGCCGCGAAACCTGAGAAATCGGAGGAAGATGGAGACGAATCAGA
AGAAGAAGCTGGTGGTATTCAGAAGATGGAGGGCCTTGCACCAAGTGATG
CATTGATGTTTCCACTGACAGCTGGTTTAACCCTCGGGGGCTTGTATCTG
GTCATTAAGCACATGGGCGCTGATCTGCTGAATAAGATTCTTGGCTACTA
TTTCTCCCAGATGGGTATGCTCTTTGCTATCGCCTTCCTGAAAGACTCTT
TTGCTGTCGTGCGGTCATTCGTCTTCCCCCGCGAGTACAGCAGCTCTGGC
AAGATATGGAAGCGGAGATCCACCCAACGGGTTTTTGAAAGCGCTTCCGA
AGGTGTCTCTAGATTGGAGTCTTCGGAGGTGGGAATCCGGAACTCTCCCC
TTCCTGGGTTCTGGGGGTCAATCCCATTGCCGCATACTGCTCGCGCAGCA
CTCTGGACTTGCCGTGAAATAGTATATTGGCGCGCTAAGCTTAGAATCCA
TATACATCGTGTTCTCCGCACTGAATGCTGGCTTAGTATCTTGGACATTA
TCAGCATAGCTGTATCATTCCCTACAATTGGTTACTTCACTTTTGTGTCC
AAACCATGGTGGTTGACCAACTTCCTGGGATTCAGTTTCTGCTATGGCAC
CCTGCAATTTATGTCGCCGTCTACTTTCATCACCGGATCGCTGATCCTGG
GATCTTTGTTCTTCTATGACATCTATTTTGTCTATTTCACCCCACTGATG
GTGACGGTCGCAAAGACACTAGACGTCCCGATCAAGCTCCTGTTTCCGCG
CCCTGCAGCGCCTGGGGAGGCACCCGATACTATCTCCCTTGCTATGCTGG
GACTGGGCGACATCATCATTCCCGGTATGATGGTAGGCCTGGCACTCCGG
TTCGATCTTTATCTCTACTACAAGCGCAAGGGCCAGCAAAAGGCGCGAGC
AGAGGGCAAGGACTCGGAAATAGTCAAGCCTGTATATCAGTCCGCGCTGG
GAGGATGGGGAGAACGGTTCTGGACCCGTTCAGTGGTACCAAGCAAGCCG
CAGCTGGACCCTCCCTACCACAACGCCCGATCTTTCCCCAAGCCTTATTT
CACCGCCAGTCTCATTGGATATGTCATGGGTATGCTTGCGACTCTGATCG
TAATGCAGGTGTTTGACCATCCCCAGCCTGCGCTCCTGTACCTTGTACCT
GGGGTTTTGATCTCTCTGTGGGGAACTGCATTGGTGAGAAAGGAGATCCA
AGAGATGTGGGAGTTTAGCGATGCGGAAGAAGACGAGGAACAGGAGCCCA
CAGATGATAAGCAAGCAAAGGATTCGGTCGAGACTGGCGGGCAAGCATCT
CTTTTCTCCCGGATATTTTCCAAATCTCATGATGCCGCGTCGAATAATGC
TTCCAAGGAAACTGCAGAGAGACAGGCGTCGGAGGAATCCGCCAAAGACG
AGGATGATACCACGAAAAACTTCGAGTTATTCACCATTTCCTTGTACTAT
CCTCGGAAGCAACAGCAACAGTCTGACAAGACTCAGAAGCCCACAGAGCG
TGTTTCGTCCCCGGAGGACGATGAAAATTGGGCCATTGTTGGTGCTGACC
GGGATGCTGAACCGCCCGCGAAGCGCCTGCGTCGGAGTCCCAGACATGCA
GCCGACCAGAAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004190 | aspartic-type endopeptidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003995-T1.utr3p1 | KJC3_003995-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003995-T1.utr5p1 | KJC3_003995-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263S2P |
| Note | MEROPS:MER0013569 |
| DBxref | InterPro:IPR007369 |
| DBxref | InterPro:IPR006639 |
| DBxref | PFAM:PF04258 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3630904..3632997 - |
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