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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3634185..3635965+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003996-T1 ID=KJC3_003996-T1|Name=KJC3_003996-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1781bp|location=Sequence derived from alignment at ch3:3634185..3635965+ (Aspergillus niger KJC3)
CGTTCTGGCGGGGTGGCGCTGTTGATGGATACAAATACACCTACCTCCTC
TCCTCATAACTTCGTTCAGCAACCTTACAAGTTCCATTTGCCTGTCTCGC
CCGAAGCATAATCCATTTATTTTTAAATCTCAACCTCCTTGTCTGACATT
GTTAGTCCAGAAACATGGCTCCTTTGCAGAAAGTGGTCGTGGTATACGGT
GCCACTGGTGAGTCAGGTTTGCAGCGTCGTTTGCCGTGTATACATATCTA
ACACACTATCCCAGGTGTCCAGGGAAGGTCCATCGCCCTCTCTCTCCTCA
AGAGCCAGCAGAACTTCGTCGTCCGGGCGCTTACTCGGAACCCTCAGTCG
GAAAAGGCCAAAGAATTGGCTCGCCTAGGAGCTGAGGTGGTTAAGGCTGA
TGGATTCAACGACAACGACATGCAGAATGCCCTGTCCGGTGCCTGGGGAT
TCTGGCTTAACACCCACCACCATGACCCAGTAAGTGGCCTTCTTGATTAC
GAGGGCACCAACTCCTCATTCCATGAATCACACGCTGATCGCCAACATCC
AGGCGGTAACGCAACCCGGTGGGCCGACTGACGAGGATCTCGGCAACCGC
CTCATCGAGATTGCAGCCAAGGCAGGCGTGAAGGTCTTCATTTACAGTAC
CTGCGAGTCTCCTGCGATATTTACCAAAGGCGTTGCACCCGTTCCGGGCA
TGGATGGTATGTTCATCATGATTTCTTCGTGTCCGCGTCTAACTTTCCTC
TTTATAGCCAAACACCGATGTGAGTTGTATGCCCGAACATTCAAGGAGTT
TGACGCCGTCATTGGCGCCTTCCCCGGGTGGTACTTCGAGAACTATGTCA
CTCCCGAGTACGCGCAGGCCTTCGGTGGCTTCCCCATGTTCCCCGACAAC
GAGGGCTACCTGACCTGGCACGCTCCCTTGGTAGGTGGCGAAGGCAAGGT
CCAAACGGTCTCCATTGAGGACGATTTTGGTGAGATGGTGCACGGAATGT
TTCTGAACCCACTGAAGTGGAAGAACAAGACCATTCAGTGCGTGAGTGAT
GCGTTCACGTATGAGGATATGGTGAAGACCTTCACTGAGGGTAGGTTTCT
AATTTAGCTTTCTCTGGGAGTTGCTAACTGGGTGTCGCAGTTACGGGAAA
GAAATCTCGCTACATTCCCATGGCCTCAGCGGATGACTTCCCAACCCATG
GGAACTCTGTCCTCGTTGAGTTGCAGGATGTCTTCAAGTACACCCAGAAT
AACAATGGCTGGTTCTTCGGTAACCCCGACGACTTCGCAACCTGCCAGTC
ACTCAAGGACGAGGCCCGCCGGGATAAGGGTCTTGAGCCGGAGCCGGTCA
TCTCCATGGCTAAGTACTTTATCAAGCACTATGGACCCAACTAGACCAGA
AGAACCGCGGAGAAGATGCAGCGACTGTTTCCACCTGCTAAGGAGACGTT
TATGTGTAACATGAAAACTAGCGGATACCTTACCAAACCATTCTTTCCAT
TCTTTCTCGGTGCACAGTTCTAGACATAATTACGAACGAGCATAGATTAT
GGGAAAACTGCATCGTAGTACACACACTCGTTTCCCCTGAACAGTGGGTA
GGAAACGGAGCGGAAAGCCTAGAAGCTCAGGAAATGGCGCACTCGCATCC
CACGCTCAGTCTGCTGAGTTGGCCAGGACAAATACTCCAAAAGCCAAATC
TGCGCAGTGCGTAAGTAATCCTGCGTCCGACGCCGACAATTGGACAGGAA
CATTCCGGATGCATGACTTGCAGGAAGGGGG back to topCoding sequence (CDS) from alignment at ch3:3634185..3635965+ >KJC3_003996-T1 ID=KJC3_003996-T1|Name=KJC3_003996-T1|organism=Aspergillus niger KJC3|type=CDS|length=4995bp|location=Sequence derived from alignment at ch3:3634185..3635965+ (Aspergillus niger KJC3)
ATGGCTCCTTTGCAGAAAGTGGTCGTGGTATACGGTGCCACTGGTGTCCA
GGGAAGGTCCATCGCCCTCTCTCTCCTCAAGAGCCAGCAGAACTTCGTCG
TCCGGGCGCTTACTCGGAACCCTCAGTCGGAAAAGGCCAAAGAATTGGCT
CGCCTAGGAGCTGAGGTGGTTAAGGCTGATGGATTCAACGACAACGACAT
GCAGAATGCCCTGTCCGGTGCCTGGGGATTCTGGCTTAACACCCACCACC
ATGACCCAGCGGTAACGCAACCCGGTGGGCCGACTGACGAGGATCTCGGC
AACCGCCTCATCGAGATTGCAGCCAAGGCAGGCGTGAAGGTCTTCATTTA
CAGTACCTGCGAGTCTCCTGCGATATTTACCAAAGGCGTTGCACCCGTTC
CGGGCATGGATGCCAAACACCGATGTGAGTTGTATGCCCGAACATTCAAG
GAGTTTGACGCCGTCATTGGCGCCTTCCCCGGGTGGTACTTCGAGAACTA
TGTCACTCCCGAGTACGCGCAGGCCTTCGGTGGCTTCCCCATGTTCCCCG
ACAACGAGGGCTACCTGACCTGGCACGCTCCCTTGGTAGGTGGCGAAGGC
AAGGTCCAAACGGTCTCCATTGAGGACGATTTTGGTGAGATGGTGCACGG
AATGTTTCTGAACCCACTGAAGTGGAAGAACAAGACCATTCAGTGCGTGA
GTGATGCGTTCACGTATGAGGATATGGTGAAGACCTTCACTGAGGTTACG
GGAAAGAAATCTCGCTACATTCCCATGGCCTCAGCGGATGACTTCCCAAC
CCATGGGAACTCTGTCCTCGTTGAGTTGCAGGATGTCTTCAAGTACACCC
AGAATAACAATGGCTGGTTCTTCGGTAACCCCGACGACTTCGCAACCTGC
CAGTCACTCAAGGACGAGGCCCGCCGGGATAAGGGTCTTGAGCCGGAGCC
GGTCATCTCCATGGCTAAGTACTTTATCAAGCACTATGGACCCAACTAGA
TGGCTCCTTTGCAGAAAGTGGTCGTGGTATACGGTGCCACTGGTGTCCAG
GGAAGGTCCATCGCCCTCTCTCTCCTCAAGAGCCAGCAGAACTTCGTCGT
CCGGGCGCTTACTCGGAACCCTCAGTCGGAAAAGGCCAAAGAATTGGCTC
GCCTAGGAGCTGAGGTGGTTAAGGCTGATGGATTCAACGACAACGACATG
CAGAATGCCCTGTCCGGTGCCTGGGGATTCTGGCTTAACACCCACCACCA
TGACCCAGCGGTAACGCAACCCGGTGGGCCGACTGACGAGGATCTCGGCA
ACCGCCTCATCGAGATTGCAGCCAAGGCAGGCGTGAAGGTCTTCATTTAC
AGTACCTGCGAGTCTCCTGCGATATTTACCAAAGGCGTTGCACCCGTTCC
GGGCATGGATGCCAAACACCGATGTGAGTTGTATGCCCGAACATTCAAGG
AGTTTGACGCCGTCATTGGCGCCTTCCCCGGGTGGTACTTCGAGAACTAT
GTCACTCCCGAGTACGCGCAGGCCTTCGGTGGCTTCCCCATGTTCCCCGA
CAACGAGGGCTACCTGACCTGGCACGCTCCCTTGGTAGGTGGCGAAGGCA
AGGTCCAAACGGTCTCCATTGAGGACGATTTTGGTGAGATGGTGCACGGA
ATGTTTCTGAACCCACTGAAGTGGAAGAACAAGACCATTCAGTGCGTGAG
TGATGCGTTCACGTATGAGGATATGGTGAAGACCTTCACTGAGGTTACGG
GAAAGAAATCTCGCTACATTCCCATGGCCTCAGCGGATGACTTCCCAACC
CATGGGAACTCTGTCCTCGTTGAGTTGCAGGATGTCTTCAAGTACACCCA
GAATAACAATGGCTGGTTCTTCGGTAACCCCGACGACTTCGCAACCTGCC
AGTCACTCAAGGACGAGGCCCGCCGGGATAAGGGTCTTGAGCCGGAGCCG
GTCATCTCCATGGCTAAGTACTTTATCAAGCACTATGGACCCAACTAGAT
GGCTCCTTTGCAGAAAGTGGTCGTGGTATACGGTGCCACTGGTGTCCAGG
GAAGGTCCATCGCCCTCTCTCTCCTCAAGAGCCAGCAGAACTTCGTCGTC
CGGGCGCTTACTCGGAACCCTCAGTCGGAAAAGGCCAAAGAATTGGCTCG
CCTAGGAGCTGAGGTGGTTAAGGCTGATGGATTCAACGACAACGACATGC
AGAATGCCCTGTCCGGTGCCTGGGGATTCTGGCTTAACACCCACCACCAT
GACCCAGCGGTAACGCAACCCGGTGGGCCGACTGACGAGGATCTCGGCAA
CCGCCTCATCGAGATTGCAGCCAAGGCAGGCGTGAAGGTCTTCATTTACA
GTACCTGCGAGTCTCCTGCGATATTTACCAAAGGCGTTGCACCCGTTCCG
GGCATGGATGCCAAACACCGATGTGAGTTGTATGCCCGAACATTCAAGGA
GTTTGACGCCGTCATTGGCGCCTTCCCCGGGTGGTACTTCGAGAACTATG
TCACTCCCGAGTACGCGCAGGCCTTCGGTGGCTTCCCCATGTTCCCCGAC
AACGAGGGCTACCTGACCTGGCACGCTCCCTTGGTAGGTGGCGAAGGCAA
GGTCCAAACGGTCTCCATTGAGGACGATTTTGGTGAGATGGTGCACGGAA
TGTTTCTGAACCCACTGAAGTGGAAGAACAAGACCATTCAGTGCGTGAGT
GATGCGTTCACGTATGAGGATATGGTGAAGACCTTCACTGAGGTTACGGG
AAAGAAATCTCGCTACATTCCCATGGCCTCAGCGGATGACTTCCCAACCC
ATGGGAACTCTGTCCTCGTTGAGTTGCAGGATGTCTTCAAGTACACCCAG
AATAACAATGGCTGGTTCTTCGGTAACCCCGACGACTTCGCAACCTGCCA
GTCACTCAAGGACGAGGCCCGCCGGGATAAGGGTCTTGAGCCGGAGCCGG
TCATCTCCATGGCTAAGTACTTTATCAAGCACTATGGACCCAACTAGATG
GCTCCTTTGCAGAAAGTGGTCGTGGTATACGGTGCCACTGGTGTCCAGGG
AAGGTCCATCGCCCTCTCTCTCCTCAAGAGCCAGCAGAACTTCGTCGTCC
GGGCGCTTACTCGGAACCCTCAGTCGGAAAAGGCCAAAGAATTGGCTCGC
CTAGGAGCTGAGGTGGTTAAGGCTGATGGATTCAACGACAACGACATGCA
GAATGCCCTGTCCGGTGCCTGGGGATTCTGGCTTAACACCCACCACCATG
ACCCAGCGGTAACGCAACCCGGTGGGCCGACTGACGAGGATCTCGGCAAC
CGCCTCATCGAGATTGCAGCCAAGGCAGGCGTGAAGGTCTTCATTTACAG
TACCTGCGAGTCTCCTGCGATATTTACCAAAGGCGTTGCACCCGTTCCGG
GCATGGATGCCAAACACCGATGTGAGTTGTATGCCCGAACATTCAAGGAG
TTTGACGCCGTCATTGGCGCCTTCCCCGGGTGGTACTTCGAGAACTATGT
CACTCCCGAGTACGCGCAGGCCTTCGGTGGCTTCCCCATGTTCCCCGACA
ACGAGGGCTACCTGACCTGGCACGCTCCCTTGGTAGGTGGCGAAGGCAAG
GTCCAAACGGTCTCCATTGAGGACGATTTTGGTGAGATGGTGCACGGAAT
GTTTCTGAACCCACTGAAGTGGAAGAACAAGACCATTCAGTGCGTGAGTG
ATGCGTTCACGTATGAGGATATGGTGAAGACCTTCACTGAGGTTACGGGA
AAGAAATCTCGCTACATTCCCATGGCCTCAGCGGATGACTTCCCAACCCA
TGGGAACTCTGTCCTCGTTGAGTTGCAGGATGTCTTCAAGTACACCCAGA
ATAACAATGGCTGGTTCTTCGGTAACCCCGACGACTTCGCAACCTGCCAG
TCACTCAAGGACGAGGCCCGCCGGGATAAGGGTCTTGAGCCGGAGCCGGT
CATCTCCATGGCTAAGTACTTTATCAAGCACTATGGACCCAACTAGATGG
CTCCTTTGCAGAAAGTGGTCGTGGTATACGGTGCCACTGGTGTCCAGGGA
AGGTCCATCGCCCTCTCTCTCCTCAAGAGCCAGCAGAACTTCGTCGTCCG
GGCGCTTACTCGGAACCCTCAGTCGGAAAAGGCCAAAGAATTGGCTCGCC
TAGGAGCTGAGGTGGTTAAGGCTGATGGATTCAACGACAACGACATGCAG
AATGCCCTGTCCGGTGCCTGGGGATTCTGGCTTAACACCCACCACCATGA
CCCAGCGGTAACGCAACCCGGTGGGCCGACTGACGAGGATCTCGGCAACC
GCCTCATCGAGATTGCAGCCAAGGCAGGCGTGAAGGTCTTCATTTACAGT
ACCTGCGAGTCTCCTGCGATATTTACCAAAGGCGTTGCACCCGTTCCGGG
CATGGATGCCAAACACCGATGTGAGTTGTATGCCCGAACATTCAAGGAGT
TTGACGCCGTCATTGGCGCCTTCCCCGGGTGGTACTTCGAGAACTATGTC
ACTCCCGAGTACGCGCAGGCCTTCGGTGGCTTCCCCATGTTCCCCGACAA
CGAGGGCTACCTGACCTGGCACGCTCCCTTGGTAGGTGGCGAAGGCAAGG
TCCAAACGGTCTCCATTGAGGACGATTTTGGTGAGATGGTGCACGGAATG
TTTCTGAACCCACTGAAGTGGAAGAACAAGACCATTCAGTGCGTGAGTGA
TGCGTTCACGTATGAGGATATGGTGAAGACCTTCACTGAGGTTACGGGAA
AGAAATCTCGCTACATTCCCATGGCCTCAGCGGATGACTTCCCAACCCAT
GGGAACTCTGTCCTCGTTGAGTTGCAGGATGTCTTCAAGTACACCCAGAA
TAACAATGGCTGGTTCTTCGGTAACCCCGACGACTTCGCAACCTGCCAGT
CACTCAAGGACGAGGCCCGCCGGGATAAGGGTCTTGAGCCGGAGCCGGTC
ATCTCCATGGCTAAGTACTTTATCAAGCACTATGGACCCAACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003996-T1.utr5p1 | KJC3_003996-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003996-T1.utr3p1 | KJC3_003996-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| DBxref | PFAM:PF05368 |
| DBxref | PFAM:PF13460 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3634185..3635965 + |
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