You are here

Home

KJC3_004001-T1, KJC3_004001-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004001-T1
Unique NameKJC3_004001-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3645277..3646866+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004001-T1 ID=KJC3_004001-T1|Name=KJC3_004001-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1590bp|location=Sequence derived from alignment at ch3:3645277..3646866+ (Aspergillus niger KJC3)
ATGGCACGTCTGCAATCCACTGAAATCGAAGCCCTTCGTGCTGCCGCGCC
TCCTCTCCCTCTCACAATAGCCCCTTCCGTCTCCTCCGATCTGTACAAAT
CACCCTACACCCGTGCAAAACCGCCTGCAAAACGATTCGACGATCACTTC
AGCATCGAAAGCCGGAACTTTACCGGCTCAGCATTGAAAAAGGGGTCCAG
TCCAAGCGGTCCGCGCAAGATCATATCTCTCGGGACAGGACGACCAACTG
CGGATTATTATCCCTGGGAATCAATAACCCTGGGCGAGGCTCCTCCAGTG
CCTACAATCAAAACTACAACAAAATCCAATCTACACCTATCCAACGGGCA
GGAAAAGGGCCACTCTGCGCACACCATCTCCAAACAAGGTGCAACATACA
ACCTCTCAATCGCATTAAACTACTGCCTTGCAAACGGATCAGCACACTTA
CTCCGTTTCATTACCGAGCATGTTGAGCTCGTTCACAATCCCCCGTATGC
AGATTGGGCGACATTCCTCTCCTGTGGTGCAACTGCCGCGACGGAGGCAG
CGTTTCGCATTTTCTGTGATCGTGGAGACACTGTAGTAGCGGAGCAGTAT
ACGTACCCGGGGACGCTGGAAAGTGCCGAATTGAACGGGGTTAGGGTTCA
TGGGATTGAGATGGATGCGAATGGCTTGCGACCTGATGTCTTGAATGAGG
TACTCTCCTCTTGGAATGATGCTCAATCTCCCAAACCACGCGTGCTGTAT
ACCATCCCTACGGGTCAGAACCCGACAGGAGCTAGCCAAACCCTGGAAAG
ACGCAGAGCAATCTATGATGTTGCAGAAAAACACGACCTCATAATCATTG
AGGATGACCCTTACTATTTCCTGAGGATGGGCCCTTACTATGATCACGAC
CTAGATGCCAATGGCTCTGCATCTGCAGATGACAAAGCCGCTCGGATATT
CCATACTGAGTCCATTCCCTCCTACCTCACTTTAGATACAGCCGGGCGCG
TGGTACGTATTGATTCCGCATCCAAGATTCTCGCTCCCGGATTACGCGCC
GGCTGGGTCACTGCATCCAGGCAAATCATCGACAAGTTCACTGCATACCA
GGAAGTGAGCACTTTAGCAGTTAGCGGCCCCTCCCAGCTCATGCTCTGGC
ATCTGCTCGATGAGAACTGGGGACATGACGGATTCACCGCGTGGCTTGTT
GATCTCTCGCGTGAGTATCGGTGGCGGCGGGATGTCCTCCTTGGTGCTTG
TAATTACTACTTGCCCAGGAAGATCGTGCAGTGGAATGCACCGGAGTTCG
GCATGTTTTTGTGGGTTAAGATTGACTGGAGACAGCATCCTCAGCTTGAG
AGCTCGTCCGAATTGTCGCTGGAGGAGGTTGGTGCGCAGATAATTGGGCT
GGAGGAGAAGATTGCAGCTAAGGCTTTGGAGAAGGGTGTGCTTGTAACTA
AGGGTTCGCTGTTCGCTTCGAATAAAGAGCTAAATGGCCATCTGCATTTT
CGTATGACGTTTGCGGCTGCGGAGGAGGGCGATCTGAAAGAGGGGGCGAG
ATTGTTTGCTGAGGCTGTGAGTGAGGAGTTCGGACTATGA
back to top

Coding sequence (CDS) from alignment at ch3:3645277..3646866+

>KJC3_004001-T1 ID=KJC3_004001-T1|Name=KJC3_004001-T1|organism=Aspergillus niger KJC3|type=CDS|length=1590bp|location=Sequence derived from alignment at ch3:3645277..3646866+ (Aspergillus niger KJC3)
ATGGCACGTCTGCAATCCACTGAAATCGAAGCCCTTCGTGCTGCCGCGCC
TCCTCTCCCTCTCACAATAGCCCCTTCCGTCTCCTCCGATCTGTACAAAT
CACCCTACACCCGTGCAAAACCGCCTGCAAAACGATTCGACGATCACTTC
AGCATCGAAAGCCGGAACTTTACCGGCTCAGCATTGAAAAAGGGGTCCAG
TCCAAGCGGTCCGCGCAAGATCATATCTCTCGGGACAGGACGACCAACTG
CGGATTATTATCCCTGGGAATCAATAACCCTGGGCGAGGCTCCTCCAGTG
CCTACAATCAAAACTACAACAAAATCCAATCTACACCTATCCAACGGGCA
GGAAAAGGGCCACTCTGCGCACACCATCTCCAAACAAGGTGCAACATACA
ACCTCTCAATCGCATTAAACTACTGCCTTGCAAACGGATCAGCACACTTA
CTCCGTTTCATTACCGAGCATGTTGAGCTCGTTCACAATCCCCCGTATGC
AGATTGGGCGACATTCCTCTCCTGTGGTGCAACTGCCGCGACGGAGGCAG
CGTTTCGCATTTTCTGTGATCGTGGAGACACTGTAGTAGCGGAGCAGTAT
ACGTACCCGGGGACGCTGGAAAGTGCCGAATTGAACGGGGTTAGGGTTCA
TGGGATTGAGATGGATGCGAATGGCTTGCGACCTGATGTCTTGAATGAGG
TACTCTCCTCTTGGAATGATGCTCAATCTCCCAAACCACGCGTGCTGTAT
ACCATCCCTACGGGTCAGAACCCGACAGGAGCTAGCCAAACCCTGGAAAG
ACGCAGAGCAATCTATGATGTTGCAGAAAAACACGACCTCATAATCATTG
AGGATGACCCTTACTATTTCCTGAGGATGGGCCCTTACTATGATCACGAC
CTAGATGCCAATGGCTCTGCATCTGCAGATGACAAAGCCGCTCGGATATT
CCATACTGAGTCCATTCCCTCCTACCTCACTTTAGATACAGCCGGGCGCG
TGGTACGTATTGATTCCGCATCCAAGATTCTCGCTCCCGGATTACGCGCC
GGCTGGGTCACTGCATCCAGGCAAATCATCGACAAGTTCACTGCATACCA
GGAAGTGAGCACTTTAGCAGTTAGCGGCCCCTCCCAGCTCATGCTCTGGC
ATCTGCTCGATGAGAACTGGGGACATGACGGATTCACCGCGTGGCTTGTT
GATCTCTCGCGTGAGTATCGGTGGCGGCGGGATGTCCTCCTTGGTGCTTG
TAATTACTACTTGCCCAGGAAGATCGTGCAGTGGAATGCACCGGAGTTCG
GCATGTTTTTGTGGGTTAAGATTGACTGGAGACAGCATCCTCAGCTTGAG
AGCTCGTCCGAATTGTCGCTGGAGGAGGTTGGTGCGCAGATAATTGGGCT
GGAGGAGAAGATTGCAGCTAAGGCTTTGGAGAAGGGTGTGCTTGTAACTA
AGGGTTCGCTGTTCGCTTCGAATAAAGAGCTAAATGGCCATCTGCATTTT
CGTATGACGTTTGCGGCTGCGGAGGAGGGCGATCTGAAAGAGGGGGCGAG
ATTGTTTGCTGAGGCTGTGAGTGAGGAGTTCGGACTATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004001KJC3_004001Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004001-T1.exon1KJC3_004001-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004001-T1.cdsKJC3_004001-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004001-T1KJC3_004001-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR015424
DBxrefInterPro:IPR004839
DBxrefInterPro:IPR015421
DBxrefPFAM:PF00155
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3645277..3646866 +
Powered by Drupal