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KJC3_004006-T1, KJC3_004006-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004006-T1
Unique NameKJC3_004006-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3656261..3657570-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004006-T1 ID=KJC3_004006-T1|Name=KJC3_004006-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1310bp|location=Sequence derived from alignment at ch3:3656261..3657570- (Aspergillus niger KJC3)
CCCAACCACCCCCTTCTTCCTAAGCATCCCCCACCACCTCACCTACCATT
CATTTACTCGCGCTTGGGTATTCTTTACTGCCCCTCATAAATGTCGGAAA
GTAAAGAACATCAAGCTCGTCGACATGCCATCAAGGCTGTCGCGCAGACC
ATCTCGAATCGTCCGGAAATTCGATATCAGCACAAAGACCTGGATCACCT
CCCGATTCAGATCCTCCACATGCCCCTATCAGCCGATGGGGACCCATTAT
TCAAGCCTGAATTTTTTTGACCCTACCAGAAGCCCCTCCCAGACCCGGAT
GAGGAGATAGAATTCTCGCCCTCCAGCCCGAAGGAAGCTATGAGACCGCT
GGACGAGGCAATGATCCTCAGCGACTATTTCGGGGAATATATTACCGATG
CCACACTTGTTCACAAGGTTGATTGGCAACATAATCCCAGACAGTATGGT
TGATCTCTTTCCATAGGACAGAACCAATGAATCTTACGACGAACAAATTA
CTGATCTGTCTCCAGGACCATTGACTTTCCATGTATTCTTCACGAGATTG
ATCAGGAAAAATCATTGGACTGGCGCGTGGATGGGATAAATGGCATTCCA
GGTGGACCTCGAATGAAATCTCTTTTACTCGAGAGTGTGAACGCGGACGA
TGATCAGATCACCCGTGGGGAGATCTTATGTATGTGTCGAATCATGCATA
CTTGCCTCTGTTCCAGAAAGTATCGTGCCCACCAAGTCAGTCCGGTGAGT
GATGTCATGTCTTCTTTCTGTCTCATTCGAATTCCTGTGGCTAACTCACC
CAAAAGGTGCTACTCATTTCCTTTGTGGGTCCAAGACATGCTCGCATTCT
CATGGGCCATCATGATGGCACCAACCTGGTGATCCGTCAATCGAAACGCT
TTGCATTCTGGAAACAGAACATCCCCGACTGGAAGATCTTACTTCGATGG
TGGTGCTCGTCTGCGGTCGGGGATACCATTAATGGGTAGCGGAGGTTTAG
TACTCCCGTGCCCCTTCTCTCGTTGAAGTTGTTATCACTGTTTTATATTC
GTTCACGCATGGTCTAGTCGGTGTTTATTGGTCTGGTTTGGTTATACCCA
AGGAATGTGGCAGGTTTGTGGCGTTTAATGAATAGGAAGGATTTTTGGTC
GTCTTTCAGATGCAATAAGGACAACGTACATCATATGTCTCTCACGATGG
ATTGGAGTTGGGGAGTACTGAAAAAGCCATGGTTAGAAGATAGTTCCGTT
GTTATCTGTCAATAGTGTTGTGTTGATAACATCATCCTACTTCATCTGAA
TACAATCTAG
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Coding sequence (CDS) from alignment at ch3:3656261..3657570-

>KJC3_004006-T1 ID=KJC3_004006-T1|Name=KJC3_004006-T1|organism=Aspergillus niger KJC3|type=CDS|length=1548bp|location=Sequence derived from alignment at ch3:3656261..3657570- (Aspergillus niger KJC3)
GTGCTACTCATTTCCTTTGTGGGTCCAAGACATGCTCGCATTCTCATGGG
CCATCATGATGGCACCAACCTGGTGATCCGTCAATCGAAACGCTTTGCAT
TCTGGAAACAGAACATCCCCGACTGGAAGATCTTACTTCGATGGTGGTGC
TCGTCTGCGGTCGGGGATACCATTAATGGGTAGGACCATTGACTTTCCAT
GTATTCTTCACGAGATTGATCAGGAAAAATCATTGGACTGGCGCGTGGAT
GGGATAAATGGCATTCCAGGTGGACCTCGAATGAAATCTCTTTTACTCGA
GAGTGTGAACGCGGACGATGATCAGATCACCCGTGGGGAGATCTTATGTA
TGTGTCGAATCATGCATACTTGCCTCTGTTCCAGAAAGTATCGTGCCCAC
CAAGTCAGTCCGATGAGACCGCTGGACGAGGCAATGATCCTCAGCGACTA
TTTCGGGGAATATATTACCGATGCCACACTTGTTCACAAGGTTGATTGGC
AACATAATCCCAGACAGTGCTACTCATTTCCTTTGTGGGTCCAAGACATG
CTCGCATTCTCATGGGCCATCATGATGGCACCAACCTGGTGATCCGTCAA
TCGAAACGCTTTGCATTCTGGAAACAGAACATCCCCGACTGGAAGATCTT
ACTTCGATGGTGGTGCTCGTCTGCGGTCGGGGATACCATTAATGGGTAGG
ACCATTGACTTTCCATGTATTCTTCACGAGATTGATCAGGAAAAATCATT
GGACTGGCGCGTGGATGGGATAAATGGCATTCCAGGTGGACCTCGAATGA
AATCTCTTTTACTCGAGAGTGTGAACGCGGACGATGATCAGATCACCCGT
GGGGAGATCTTATGTATGTGTCGAATCATGCATACTTGCCTCTGTTCCAG
AAAGTATCGTGCCCACCAAGTCAGTCCGATGAGACCGCTGGACGAGGCAA
TGATCCTCAGCGACTATTTCGGGGAATATATTACCGATGCCACACTTGTT
CACAAGGTTGATTGGCAACATAATCCCAGACAGTGCTACTCATTTCCTTT
GTGGGTCCAAGACATGCTCGCATTCTCATGGGCCATCATGATGGCACCAA
CCTGGTGATCCGTCAATCGAAACGCTTTGCATTCTGGAAACAGAACATCC
CCGACTGGAAGATCTTACTTCGATGGTGGTGCTCGTCTGCGGTCGGGGAT
ACCATTAATGGGTAGGACCATTGACTTTCCATGTATTCTTCACGAGATTG
ATCAGGAAAAATCATTGGACTGGCGCGTGGATGGGATAAATGGCATTCCA
GGTGGACCTCGAATGAAATCTCTTTTACTCGAGAGTGTGAACGCGGACGA
TGATCAGATCACCCGTGGGGAGATCTTATGTATGTGTCGAATCATGCATA
CTTGCCTCTGTTCCAGAAAGTATCGTGCCCACCAAGTCAGTCCGATGAGA
CCGCTGGACGAGGCAATGATCCTCAGCGACTATTTCGGGGAATATATTAC
CGATGCCACACTTGTTCACAAGGTTGATTGGCAACATAATCCCAGACA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004006KJC3_004006Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004006-T1KJC3_004006-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004006-T1.cdsKJC3_004006-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004006-T1.utr3p1KJC3_004006-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004006-T1.exon3KJC3_004006-T1.exon3Aspergillus niger KJC3exon
KJC3_004006-T1.exon2KJC3_004006-T1.exon2Aspergillus niger KJC3exon
KJC3_004006-T1.exon1KJC3_004006-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004006-T1.utr5p1KJC3_004006-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3656261..3657570 -
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