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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3670620..3672076+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004014-T1 ID=KJC3_004014-T1|Name=KJC3_004014-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1457bp|location=Sequence derived from alignment at ch3:3670620..3672076+ (Aspergillus niger KJC3)
GTCTCTCCCCTGGAAATACTACTCTCAACTTCCCTCCGAGAGAATAACTT
GAACTTCGCTTGAAACCCCACAAGAACCTTCTATCCATACCACACTACAA
GTTCTACATATTAAGAGACTCACTTACCTCACCACCACCGTAGTTATATA
CACTACTGCTATATCGGAGAAAATGGCCACCCATCTCGCCGCCCTTCTCC
CCTCCAAATCCTCCCCCTTCACTCTAACTACCCGCCCGACCCCCACCCCA
GGCCCCAACGACCTCCTCATCGCCGTCAAATCTATCGCTTTAAACCCAGC
AGACACCATCATGCGCGACACGGGCCTTTTCATCCCCTCCTATCCAACAG
TTCTTGGCTTCGACCTGTCCGGTCTAGTTCTCGAAGTCGGCACCAACGTC
CCCATCCATTTCCGTCCAGGAATAACCCGCGTCGCCGCCTACTCTGCCTC
CGTCTGGAAGGCCTGTGACCCCGACTATGGTGCTTTTCAGGAACGGTGTC
TCGTTCCGTGGCAGCATGTTATGCCTCTTCCGGATGAGGATGTGATAATC
TCGTGGAACGAGGCGGCTACGTTGCCTGTTGCTGTTCAAGTAGCGCTTAA
TGGGTGGGAGAGTGTGGGGGTTATGTTGCGGGCGGGAGATACTCAAAATA
ATGATGAGACTAAGAGTCAGAACGTGAAGAAGAGAGAGGTGTTATTGGTC
TGGGGTGCATCATCTAGCGTTGGCTCGATGGGTGTGCAAGTTGCCCGAGT
GCTTCGGGATCAGCCTGGTTCTTCATTCGCTGCTGTGTATGCGACTGCTG
GGACGGCGAATCATGAGTATATACGATCACTGGGTGCGGATCGGGTGTTT
GATTACGGAGACCCGAGTGTTGTGGATGAGATTGTTGAGGCGGCTAGGAA
GGATGGAAGTGTGATTCGGTATTGTTTTCTTGCGGTGGGAGATGTATGGA
TGTGTCAGGCTGTGCTGGGGGCTTTTGCGGGGTTTGATGGTGATGAAAAG
GTGAAGGGAAAGATTGCGTCGGCGCCAGTCATTCCCCCTGATGTGAAGGG
GGCGGATGGGGTTGAAGTCATCTTTGTGGTGCCATCGATGGATGATGAGG
GGAAGAGGTTGGATCAGTTTCGGTATTGGTTGGGGACGTGGGCAAGGGAG
AATATTGCTAAGGGGAAGATCAGACCGAGTCCGGAGCTGAGGGTTGTTGG
GAGGGGCTTACAGGCTCTTAATGATGGCTTGGATGAGTTGAGTCGGGGAG
TGAGTTGCACGAAGTTGGTTGTTGAAATTGCGGAGTGATGGGGCTAAGAG
TGATACTTTGCTTGATAAGGAGGGGTTGTGGAAATTCAGAACTGGACTTT
CTAGATGGAAGCTTATAGACATAGATAATACTAGAGTAATTGCCGAAGAG
AATACCAGCGGTATGCACAGTATATGAACGAGCTAATCGTTGCAAATGAG
CGTAGGA back to topCoding sequence (CDS) from alignment at ch3:3670620..3672076+ >KJC3_004014-T1 ID=KJC3_004014-T1|Name=KJC3_004014-T1|organism=Aspergillus niger KJC3|type=CDS|length=1116bp|location=Sequence derived from alignment at ch3:3670620..3672076+ (Aspergillus niger KJC3)
ATGGCCACCCATCTCGCCGCCCTTCTCCCCTCCAAATCCTCCCCCTTCAC
TCTAACTACCCGCCCGACCCCCACCCCAGGCCCCAACGACCTCCTCATCG
CCGTCAAATCTATCGCTTTAAACCCAGCAGACACCATCATGCGCGACACG
GGCCTTTTCATCCCCTCCTATCCAACAGTTCTTGGCTTCGACCTGTCCGG
TCTAGTTCTCGAAGTCGGCACCAACGTCCCCATCCATTTCCGTCCAGGAA
TAACCCGCGTCGCCGCCTACTCTGCCTCCGTCTGGAAGGCCTGTGACCCC
GACTATGGTGCTTTTCAGGAACGGTGTCTCGTTCCGTGGCAGCATGTTAT
GCCTCTTCCGGATGAGGATGTGATAATCTCGTGGAACGAGGCGGCTACGT
TGCCTGTTGCTGTTCAAGTAGCGCTTAATGGGTGGGAGAGTGTGGGGGTT
ATGTTGCGGGCGGGAGATACTCAAAATAATGATGAGACTAAGAGTCAGAA
CGTGAAGAAGAGAGAGGTGTTATTGGTCTGGGGTGCATCATCTAGCGTTG
GCTCGATGGGTGTGCAAGTTGCCCGAGTGCTTCGGGATCAGCCTGGTTCT
TCATTCGCTGCTGTGTATGCGACTGCTGGGACGGCGAATCATGAGTATAT
ACGATCACTGGGTGCGGATCGGGTGTTTGATTACGGAGACCCGAGTGTTG
TGGATGAGATTGTTGAGGCGGCTAGGAAGGATGGAAGTGTGATTCGGTAT
TGTTTTCTTGCGGTGGGAGATGTATGGATGTGTCAGGCTGTGCTGGGGGC
TTTTGCGGGGTTTGATGGTGATGAAAAGGTGAAGGGAAAGATTGCGTCGG
CGCCAGTCATTCCCCCTGATGTGAAGGGGGCGGATGGGGTTGAAGTCATC
TTTGTGGTGCCATCGATGGATGATGAGGGGAAGAGGTTGGATCAGTTTCG
GTATTGGTTGGGGACGTGGGCAAGGGAGAATATTGCTAAGGGGAAGATCA
GACCGAGTCCGGAGCTGAGGGTTGTTGGGAGGGGCTTACAGGCTCTTAAT
GATGGCTTGGATGAGTTGAGTCGGGGAGTGAGTTGCACGAAGTTGGTTGT
TGAAATTGCGGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004014-T1.utr5p1 | KJC3_004014-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004014-T1.utr3p1 | KJC3_004014-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR011032 |
| DBxref | InterPro:IPR020843 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3670620..3672076 + |
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