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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3678230..3680609- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004018-T1 ID=KJC3_004018-T1|Name=KJC3_004018-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2380bp|location=Sequence derived from alignment at ch3:3678230..3680609- (Aspergillus niger KJC3)
ATGGCTATCCTAGTCTGAATTTCTAGAATCACGTCACCACTATCTAACTA
GTAGAGATACAACACTGCGCTGGCATTTGTCCAGTCTAACACTTGCTGAC
CTGTCATTTGTTTCATGCCGATTGATAAGCGACCTGCTCGGAGTTTAACC
AACAAACGGATTGTCCATCTTTTATCTTAGTCCTTCCTTGCCGGCTCCCT
TCGCTCCCCCCGCCCGGTTCTTAAATGTTCTGAGCCCACCCCAAGTGTTA
TTTTGTTCCAACTCCGGAGCAAGCAAATGTAGGCAACAGTTCTATCTGCT
ATACCCATTATTCCTGCTCCTGGTGCGAAACGGTTCGCGCAATGTCCACA
ATCAGGGGCGACGCATCGCCTGCTGCGCATGCCGAGGTTGGTTCGGGACT
GCAAGCCGGTCTGGACGCCCCTGCGCCAATTGATGCTGGACTTGAGACTT
GGGAAGACACCCATGAGCGAACCCCATTATTGCAACAAGACAACGAAGAA
TCCCAACCGGAGCCTGATTATCGGGCCGGCCCACGAGATGATGCTCCCAC
CGATCAAAAAGGTCTTTGGCAGACATGGAGAAGGCCAAGCGTGAGTGCCT
CCATCTTCGATGGACAACATTCGGCCCCGCGACTTCTGACATGCAACAGG
TCCTTTGGATTCTTCCATTTCTTGTCATTTATATGCTAGGATTCGGCGGC
ACTGCAGTGCCCAAGATTAACCTGATGATGTCTCTCATTTGCAGAGACTA
TATGGCCAGAAAAGCGACCCAGGATCCAGGTTTCACGTATTTGCCTGTCA
TCATTGGGAATAAGAATTCGCAGTGTCAGACACCCGAAGTTCAGTCATTA
CTTGCTCAGTTCCAGTTGTATTTCAATCTCCTGGCCGGGATACTATCTGC
GCTAGCATGCCCCCGACTGGGTCACCTATCAGATCGCTACGGTAGGACAA
AGATACTGGCCCTTAGCGCATTGGGGACCGTTTTGGCGGAAGCTATCTTT
GTCTTTGTCGCAGCCAAGCCAGACCTTGTATCTGTGAATGTGCTTCTAGT
GGCTGCCATCGTCGATGGCGTCTGTGGTTCTTTCACCACCATCATGGCGC
TGACAATGTCGTATGCCTCCGACTGCACCATCCCATCGAAGCGGAGTGCG
GGATTCGGGTATGTGTACGGCTCTCTTTTCGCCGGAGTTGCAGCCGGGCC
TCTGCTGGCGGCTATCTTGATCAAGCAATCAGGCCAGGCACTGAGTACCT
TTGAGGCCTCATTGGCCATGCATGCGCTCTACCTCATTGCGCTTATGACC
ATTATCCCGGAATCATTATCAACAGAACGTCAGCAGCAAGCGCGAGACAA
TCATCGAAGAAAAGTCATCGACGAAGGGGAGGCAGGCTGGCTGAGTCTGG
AGAACCTCAACCCCAAAAGGCTAATTACACCTTTATCTGTTTTGCTACCG
CCAGTAGGACGTCCCAGCACGCTTTTCCCTAATCGTCACGGCGCGAGTCC
GGCCTTGCGCAGAAATATTATTCTTCTTACAGCGATAGATACTATTGCAT
TTGGGGTCGCATTGGGAACCGCTCAAGTGGTCATTATTTATGCCGAGTAC
AAATTCGACTGGGGCAATGTGGAATCAAGCCTCTTCATATCAATTATCAG
CATCGCCCGAGTCGTGAACCTCTTTGTTGTATATCCGATTATCACCGCAA
TCTTCCGTGAACCACACAAACCAGATCACATCGTTCCCGGGTCCAGCACC
TGCGAAGTTGTTCTTATACGACTTTCTCTCTTATTAGACATGGCTGGCTA
TGTGGGATATGCTATGTCAAATCAGGGTTCCTTCATGGTATTCTCGGGAA
TAGTCACAGCGCTTGGCGGCATGGGGATACCGACAATGCAATCATCTCTC
ACGAAACATGTCCCTCGGGAACGGTTAGGTCAGATCCTTGGTGCGAAAGG
ACTCTTGCATGCGCTGGCTCGAGTGATTGCGCCAACCGCTTGCAGTCTCC
TTTACAGCCTGACGGTTGGAAAGTTCACTCCAGCGGTATTTGTTGTTCTG
GGGGCCTTGTTCTTGCTCACCTTCTGTAGCAGTTTTTACATTAAACCACA
TGGTAGGTGACCCTCCTTTCTCATTGTCTAGGAATGTCTGCTAACGAGTC
GGTGTTTGGCAGTTACTCTTGACGAGTCTTACCCAAGTAGTCCTCGAGGT
GAGGCTAATGAAGAAGGCTTTGTGGCGGATTCTATTCTCTAGTGATGCTA
GAAGTGGAGCCGAGCAGTTACTATACTGCATGCGACCGCTAATATGGGTC
ACGGTTAGACTGATCTTCGTCACAATTGGCGTATCGAATTGTTAGACTAT
ATATTGGATTTAATTTGGTACCAAGTGATA back to topCoding sequence (CDS) from alignment at ch3:3678230..3680609- >KJC3_004018-T1 ID=KJC3_004018-T1|Name=KJC3_004018-T1|organism=Aspergillus niger KJC3|type=CDS|length=5346bp|location=Sequence derived from alignment at ch3:3678230..3680609- (Aspergillus niger KJC3)
TTACTCTTGACGAGTCTTACCCAAGTAGTCCTCGAGGTGAGGCTAATGAA
GAAGGCTTTGTGGCGGATTCTATTCTCTAGGTCCTTTGGATTCTTCCATT
TCTTGTCATTTATATGCTAGGATTCGGCGGCACTGCAGTGCCCAAGATTA
ACCTGATGATGTCTCTCATTTGCAGAGACTATATGGCCAGAAAAGCGACC
CAGGATCCAGGTTTCACGTATTTGCCTGTCATCATTGGGAATAAGAATTC
GCAGTGTCAGACACCCGAAGTTCAGTCATTACTTGCTCAGTTCCAGTTGT
ATTTCAATCTCCTGGCCGGGATACTATCTGCGCTAGCATGCCCCCGACTG
GGTCACCTATCAGATCGCTACGGTAGGACAAAGATACTGGCCCTTAGCGC
ATTGGGGACCGTTTTGGCGGAAGCTATCTTTGTCTTTGTCGCAGCCAAGC
CAGACCTTGTATCTGTGAATGTGCTTCTAGTGGCTGCCATCGTCGATGGC
GTCTGTGGTTCTTTCACCACCATCATGGCGCTGACAATGTCGTATGCCTC
CGACTGCACCATCCCATCGAAGCGGAGTGCGGGATTCGGGTATGTGTACG
GCTCTCTTTTCGCCGGAGTTGCAGCCGGGCCTCTGCTGGCGGCTATCTTG
ATCAAGCAATCAGGCCAGGCACTGAGTACCTTTGAGGCCTCATTGGCCAT
GCATGCGCTCTACCTCATTGCGCTTATGACCATTATCCCGGAATCATTAT
CAACAGAACGTCAGCAGCAAGCGCGAGACAATCATCGAAGAAAAGTCATC
GACGAAGGGGAGGCAGGCTGGCTGAGTCTGGAGAACCTCAACCCCAAAAG
GCTAATTACACCTTTATCTGTTTTGCTACCGCCAGTAGGACGTCCCAGCA
CGCTTTTCCCTAATCGTCACGGCGCGAGTCCGGCCTTGCGCAGAAATATT
ATTCTTCTTACAGCGATAGATACTATTGCATTTGGGGTCGCATTGGGAAC
CGCTCAAGTGGTCATTATTTATGCCGAGTACAAATTCGACTGGGGCAATG
TGGAATCAAGCCTCTTCATATCAATTATCAGCATCGCCCGAGTCGTGAAC
CTCTTTGTTGTATATCCGATTATCACCGCAATCTTCCGTGAACCACACAA
ACCAGATCACATCGTTCCCGGGTCCAGCACCTGCGAAGTTGTTCTTATAC
GACTTTCTCTCTTATTAGACATGGCTGGCTATGTGGGATATGCTATGTCA
AATCAGGGTTCCTTCATGGTATTCTCGGGAATAGTCACAGCGCTTGGCGG
CATGGGGATACCGACAATGCAATCATCTCTCACGAAACATGTCCCTCGGG
AACGGTTAGGTCAGATCCTTGGTGCGAAAGGACTCTTGCATGCGCTGGCT
CGAGTGATTGCGCCAACCGCTTGCAGTCTCCTTTACAGCCTGACGGTTGG
AAAGTTCACTCCAGCGGTATTTGTTGTTCTGGGGGCCTTGTTCTTGCTCA
CCTTCTGTAGCAGTTTTTACATTAAACCACATGATGTCCACAATCAGGGG
CGACGCATCGCCTGCTGCGCATGCCGAGGTTGGTTCGGGACTGCAAGCCG
GTCTGGACGCCCCTGCGCCAATTGATGCTGGACTTGAGACTTGGGAAGAC
ACCCATGAGCGAACCCCATTATTGCAACAAGACAACGAAGAATCCCAACC
GGAGCCTGATTATCGGGCCGGCCCACGAGATGATGCTCCCACCGATCAAA
AAGGTCTTTGGCAGACATGGAGAAGGCCAAGCTTACTCTTGACGAGTCTT
ACCCAAGTAGTCCTCGAGGTGAGGCTAATGAAGAAGGCTTTGTGGCGGAT
TCTATTCTCTAGGTCCTTTGGATTCTTCCATTTCTTGTCATTTATATGCT
AGGATTCGGCGGCACTGCAGTGCCCAAGATTAACCTGATGATGTCTCTCA
TTTGCAGAGACTATATGGCCAGAAAAGCGACCCAGGATCCAGGTTTCACG
TATTTGCCTGTCATCATTGGGAATAAGAATTCGCAGTGTCAGACACCCGA
AGTTCAGTCATTACTTGCTCAGTTCCAGTTGTATTTCAATCTCCTGGCCG
GGATACTATCTGCGCTAGCATGCCCCCGACTGGGTCACCTATCAGATCGC
TACGGTAGGACAAAGATACTGGCCCTTAGCGCATTGGGGACCGTTTTGGC
GGAAGCTATCTTTGTCTTTGTCGCAGCCAAGCCAGACCTTGTATCTGTGA
ATGTGCTTCTAGTGGCTGCCATCGTCGATGGCGTCTGTGGTTCTTTCACC
ACCATCATGGCGCTGACAATGTCGTATGCCTCCGACTGCACCATCCCATC
GAAGCGGAGTGCGGGATTCGGGTATGTGTACGGCTCTCTTTTCGCCGGAG
TTGCAGCCGGGCCTCTGCTGGCGGCTATCTTGATCAAGCAATCAGGCCAG
GCACTGAGTACCTTTGAGGCCTCATTGGCCATGCATGCGCTCTACCTCAT
TGCGCTTATGACCATTATCCCGGAATCATTATCAACAGAACGTCAGCAGC
AAGCGCGAGACAATCATCGAAGAAAAGTCATCGACGAAGGGGAGGCAGGC
TGGCTGAGTCTGGAGAACCTCAACCCCAAAAGGCTAATTACACCTTTATC
TGTTTTGCTACCGCCAGTAGGACGTCCCAGCACGCTTTTCCCTAATCGTC
ACGGCGCGAGTCCGGCCTTGCGCAGAAATATTATTCTTCTTACAGCGATA
GATACTATTGCATTTGGGGTCGCATTGGGAACCGCTCAAGTGGTCATTAT
TTATGCCGAGTACAAATTCGACTGGGGCAATGTGGAATCAAGCCTCTTCA
TATCAATTATCAGCATCGCCCGAGTCGTGAACCTCTTTGTTGTATATCCG
ATTATCACCGCAATCTTCCGTGAACCACACAAACCAGATCACATCGTTCC
CGGGTCCAGCACCTGCGAAGTTGTTCTTATACGACTTTCTCTCTTATTAG
ACATGGCTGGCTATGTGGGATATGCTATGTCAAATCAGGGTTCCTTCATG
GTATTCTCGGGAATAGTCACAGCGCTTGGCGGCATGGGGATACCGACAAT
GCAATCATCTCTCACGAAACATGTCCCTCGGGAACGGTTAGGTCAGATCC
TTGGTGCGAAAGGACTCTTGCATGCGCTGGCTCGAGTGATTGCGCCAACC
GCTTGCAGTCTCCTTTACAGCCTGACGGTTGGAAAGTTCACTCCAGCGGT
ATTTGTTGTTCTGGGGGCCTTGTTCTTGCTCACCTTCTGTAGCAGTTTTT
ACATTAAACCACATGATGTCCACAATCAGGGGCGACGCATCGCCTGCTGC
GCATGCCGAGGTTGGTTCGGGACTGCAAGCCGGTCTGGACGCCCCTGCGC
CAATTGATGCTGGACTTGAGACTTGGGAAGACACCCATGAGCGAACCCCA
TTATTGCAACAAGACAACGAAGAATCCCAACCGGAGCCTGATTATCGGGC
CGGCCCACGAGATGATGCTCCCACCGATCAAAAAGGTCTTTGGCAGACAT
GGAGAAGGCCAAGCTTACTCTTGACGAGTCTTACCCAAGTAGTCCTCGAG
GTGAGGCTAATGAAGAAGGCTTTGTGGCGGATTCTATTCTCTAGGTCCTT
TGGATTCTTCCATTTCTTGTCATTTATATGCTAGGATTCGGCGGCACTGC
AGTGCCCAAGATTAACCTGATGATGTCTCTCATTTGCAGAGACTATATGG
CCAGAAAAGCGACCCAGGATCCAGGTTTCACGTATTTGCCTGTCATCATT
GGGAATAAGAATTCGCAGTGTCAGACACCCGAAGTTCAGTCATTACTTGC
TCAGTTCCAGTTGTATTTCAATCTCCTGGCCGGGATACTATCTGCGCTAG
CATGCCCCCGACTGGGTCACCTATCAGATCGCTACGGTAGGACAAAGATA
CTGGCCCTTAGCGCATTGGGGACCGTTTTGGCGGAAGCTATCTTTGTCTT
TGTCGCAGCCAAGCCAGACCTTGTATCTGTGAATGTGCTTCTAGTGGCTG
CCATCGTCGATGGCGTCTGTGGTTCTTTCACCACCATCATGGCGCTGACA
ATGTCGTATGCCTCCGACTGCACCATCCCATCGAAGCGGAGTGCGGGATT
CGGGTATGTGTACGGCTCTCTTTTCGCCGGAGTTGCAGCCGGGCCTCTGC
TGGCGGCTATCTTGATCAAGCAATCAGGCCAGGCACTGAGTACCTTTGAG
GCCTCATTGGCCATGCATGCGCTCTACCTCATTGCGCTTATGACCATTAT
CCCGGAATCATTATCAACAGAACGTCAGCAGCAAGCGCGAGACAATCATC
GAAGAAAAGTCATCGACGAAGGGGAGGCAGGCTGGCTGAGTCTGGAGAAC
CTCAACCCCAAAAGGCTAATTACACCTTTATCTGTTTTGCTACCGCCAGT
AGGACGTCCCAGCACGCTTTTCCCTAATCGTCACGGCGCGAGTCCGGCCT
TGCGCAGAAATATTATTCTTCTTACAGCGATAGATACTATTGCATTTGGG
GTCGCATTGGGAACCGCTCAAGTGGTCATTATTTATGCCGAGTACAAATT
CGACTGGGGCAATGTGGAATCAAGCCTCTTCATATCAATTATCAGCATCG
CCCGAGTCGTGAACCTCTTTGTTGTATATCCGATTATCACCGCAATCTTC
CGTGAACCACACAAACCAGATCACATCGTTCCCGGGTCCAGCACCTGCGA
AGTTGTTCTTATACGACTTTCTCTCTTATTAGACATGGCTGGCTATGTGG
GATATGCTATGTCAAATCAGGGTTCCTTCATGGTATTCTCGGGAATAGTC
ACAGCGCTTGGCGGCATGGGGATACCGACAATGCAATCATCTCTCACGAA
ACATGTCCCTCGGGAACGGTTAGGTCAGATCCTTGGTGCGAAAGGACTCT
TGCATGCGCTGGCTCGAGTGATTGCGCCAACCGCTTGCAGTCTCCTTTAC
AGCCTGACGGTTGGAAAGTTCACTCCAGCGGTATTTGTTGTTCTGGGGGC
CTTGTTCTTGCTCACCTTCTGTAGCAGTTTTTACATTAAACCACATGATG
TCCACAATCAGGGGCGACGCATCGCCTGCTGCGCATGCCGAGGTTGGTTC
GGGACTGCAAGCCGGTCTGGACGCCCCTGCGCCAATTGATGCTGGACTTG
AGACTTGGGAAGACACCCATGAGCGAACCCCATTATTGCAACAAGACAAC
GAAGAATCCCAACCGGAGCCTGATTATCGGGCCGGCCCACGAGATGATGC
TCCCACCGATCAAAAAGGTCTTTGGCAGACATGGAGAAGGCCAAGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004018-T1.utr3p1 | KJC3_004018-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004018-T1.utr5p1 | KJC3_004018-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3678230..3680609 - |
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