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KJC3_004018-T2, KJC3_004018-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004018-T2
Unique NameKJC3_004018-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3678230..3680609-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004018-T2 ID=KJC3_004018-T2|Name=KJC3_004018-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2380bp|location=Sequence derived from alignment at ch3:3678230..3680609- (Aspergillus niger KJC3)
ATGGCTATCCTAGTCTGAATTTCTAGAATCACGTCACCACTATCTAACTA
GTAGAGATACAACACTGCGCTGGCATTTGTCCAGTCTAACACTTGCTGAC
CTGTCATTTGTTTCATGCCGATTGATAAGCGACCTGCTCGGAGTTTAACC
AACAAACGGATTGTCCATCTTTTATCTTAGTCCTTCCTTGCCGGCTCCCT
TCGCTCCCCCCGCCCGGTTCTTAAATGTTCTGAGCCCACCCCAAGTGTTA
TTTTGTTCCAACTCCGGAGCAAGCAAATGTAGGCAACAGTTCTATCTGCT
ATACCCATTATTCCTGCTCCTGGTGCGAAACGGTTCGCGCAATGTCCACA
ATCAGGGGCGACGCATCGCCTGCTGCGCATGCCGAGGTTGGTTCGGGACT
GCAAGCCGGTCTGGACGCCCCTGCGCCAATTGATGCTGGACTTGAGACTT
GGGAAGACACCCATGAGCGAACCCCATTATTGCAACAAGACAACGAAGAA
TCCCAACCGGAGCCTGATTATCGGGCCGGCCCACGAGATGATGCTCCCAC
CGATCAAAAAGGTCTTTGGCAGACATGGAGAAGGCCAAGCGTGAGTGCCT
CCATCTTCGATGGACAACATTCGGCCCCGCGACTTCTGACATGCAACAGG
TCCTTTGGATTCTTCCATTTCTTGTCATTTATATGCTAGGATTCGGCGGC
ACTGCAGTGCCCAAGATTAACCTGATGATGTCTCTCATTTGCAGAGACTA
TATGGCCAGAAAAGCGACCCAGGATCCAGGTTTCACGTATTTGCCTGTCA
TCATTGGGAATAAGAATTCGCAGTGTCAGACACCCGAAGTTCAGTCATTA
CTTGCTCAGTTCCAGTTGTATTTCAATCTCCTGGCCGGGATACTATCTGC
GCTAGCATGCCCCCGACTGGGTCACCTATCAGATCGCTACGGTAGGACAA
AGATACTGGCCCTTAGCGCATTGGGGACCGTTTTGGCGGAAGCTATCTTT
GTCTTTGTCGCAGCCAAGCCAGACCTTGTATCTGTGAATGTGCTTCTAGT
GGCTGCCATCGTCGATGGCGTCTGTGGTTCTTTCACCACCATCATGGCGC
TGACAATGTCGTATGCCTCCGACTGCACCATCCCATCGAAGCGGAGTGCG
GGATTCGGGTATGTGTACGGCTCTCTTTTCGCCGGAGTTGCAGCCGGGCC
TCTGCTGGCGGCTATCTTGATCAAGCAATCAGGCCAGGCACTGAGTACCT
TTGAGGCCTCATTGGCCATGCATGCGCTCTACCTCATTGCGCTTATGACC
ATTATCCCGGAATCATTATCAACAGAACGTCAGCAGCAAGCGCGAGACAA
TCATCGAAGAAAAGTCATCGACGAAGGGGAGGCAGGCTGGCTGAGTCTGG
AGAACCTCAACCCCAAAAGGCTAATTACACCTTTATCTGTTTTGCTACCG
CCAGTAGGACGTCCCAGCACGCTTTTCCCTAATCGTCACGGCGCGAGTCC
GGCCTTGCGCAGAAATATTATTCTTCTTACAGCGATAGATACTATTGCAT
TTGGGGTCGCATTGGGAACCGCTCAAGTGGTCATTATTTATGCCGAGTAC
AAATTCGACTGGGGCAATGTGGAATCAAGCCTCTTCATATCAATTATCAG
CATCGCCCGAGTCGTGAACCTCTTTGTTGTATATCCGATTATCACCGCAA
TCTTCCGTGAACCACACAAACCAGATCACATCGTTCCCGGGTCCAGCACC
TGCGAAGTTGTTCTTATACGACTTTCTCTCTTATTAGACATGGCTGGCTA
TGTGGGATATGCTATGTCAAATCAGGGTTCCTTCATGGTATTCTCGGGAA
TAGTCACAGCGCTTGGCGGCATGGGGATACCGACAATGCAATCATCTCTC
ACGAAACATGTCCCTCGGGAACGGTTAGGTCAGATCCTTGGTGCGAAAGG
ACTCTTGCATGCGCTGGCTCGAGTGATTGCGCCAACCGCTTGCAGTCTCC
TTTACAGCCTGACGGTTGGAAAGTTCACTCCAGCGGTATTTGTTGTTCTG
GGGGCCTTGTTCTTGCTCACCTTCTGTAGCAGTTTTTACATTAAACCACA
TGGTAGGTGACCCTCCTTTCTCATTGTCTAGGAATGTCTGCTAACGAGTC
GGTGTTTGGCAGTTACTCTTGACGAGTCTTACCCAAGTAGTCCTCGAGGT
GAGGCTAATGAAGAAGGCTTTGTGGCGGATTCTATTCTCTAGTGATGCTA
GAAGTGGAGCCGAGCAGTTACTATACTGCATGCGACCGCTAATATGGGTC
ACGGTTAGACTGATCTTCGTCACAATTGGCGTATCGAATTGTTAGACTAT
ATATTGGATTTAATTTGGTACCAAGTGATA
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Coding sequence (CDS) from alignment at ch3:3678230..3680609-

>KJC3_004018-T2 ID=KJC3_004018-T2|Name=KJC3_004018-T2|organism=Aspergillus niger KJC3|type=CDS|length=3420bp|location=Sequence derived from alignment at ch3:3678230..3680609- (Aspergillus niger KJC3)
GTCCTTTGGATTCTTCCATTTCTTGTCATTTATATGCTAGGATTCGGCGG
CACTGCAGTGCCCAAGATTAACCTGATGATGTCTCTCATTTGCAGAGACT
ATATGGCCAGAAAAGCGACCCAGGATCCAGGTTTCACGTATTTGCCTGTC
ATCATTGGGAATAAGAATTCGCAGTGTCAGACACCCGAAGTTCAGTCATT
ACTTGCTCAGTTCCAGTTGTATTTCAATCTCCTGGCCGGGATACTATCTG
CGCTAGCATGCCCCCGACTGGGTCACCTATCAGATCGCTACGGTAGGACA
AAGATACTGGCCCTTAGCGCATTGGGGACCGTTTTGGCGGAAGCTATCTT
TGTCTTTGTCGCAGCCAAGCCAGACCTTGTATCTGTGAATGTGCTTCTAG
TGGCTGCCATCGTCGATGGCGTCTGTGGTTCTTTCACCACCATCATGGCG
CTGACAATGTCGTATGCCTCCGACTGCACCATCCCATCGAAGCGGAGTGC
GGGATTCGGGTATGTGTACGGCTCTCTTTTCGCCGGAGTTGCAGCCGGGC
CTCTGCTGGCGGCTATCTTGATCAAGCAATCAGGCCAGGCACTGAGTACC
TTTGAGGCCTCATTGGCCATGCATGCGCTCTACCTCATTGCGCTTATGAC
CATTATCCCGGAATCATTATCAACAGAACGTCAGCAGCAAGCGCGAGACA
ATCATCGAAGAAAAGTCATCGACGAAGGGGAGGCAGGCTGGCTGAGTCTG
GAGAACCTCAACCCCAAAAGGCTAATTACACCTTTATCTGTTTTGCTACC
GCCAGTAGGACGTCCCAGCACGCTTTTCCCTAATCGTCACGGCGCGAGTC
CGGCCTTGCGCAGAAATATTATTCTTCTTACAGCGATAGATACTATTGCA
TTTGGGGTCGCATTGGGAACCGCTCAAGTGGTCATTATTTATGCCGAGTA
CAAATTCGACTGGGGCAATGTGGAATCAAGCCTCTTCATATCAATTATCA
GCATCGCCCGAGTCGTGAACCTCTTTGTTGTATATCCGATTATCACCGCA
ATCTTCCGTGAACCACACAAACCAGATCACATCGTTCCCGGGTCCAGCAC
CTGCGAAGTTGTTCTTATACGACTTTCTCTCTTATTAGACATGGCTGGCT
ATGTGGGATATGCTATGTCAAATCAGGGTTCCTTCATGGTATTCTCGGGA
ATAGTCACAGCGCTTGGCGGCATGGGGATACCGACAATGCAATCATCTCT
CACGAAACATGTCCCTCGGGAACGGTTAGGTCAGATCCTTGGTGCGAAAG
GACTCTTGCATGCGCTGGCTCGAGTGATTGCGCCAACCGCTTGCAGTCTC
CTTTACAGCCTGACGGTTGGAAAGTTCACTCCAGCGGTATTTGTTGTTCT
GGGGGCCTTGTTCTTGCTCACCTTCTGTAGCAGTTTTTACATTAAACCAC
ATGGTAGGTGAATGTCCACAATCAGGGGCGACGCATCGCCTGCTGCGCAT
GCCGAGGTTGGTTCGGGACTGCAAGCCGGTCTGGACGCCCCTGCGCCAAT
TGATGCTGGACTTGAGACTTGGGAAGACACCCATGAGCGAACCCCATTAT
TGCAACAAGACAACGAAGAATCCCAACCGGAGCCTGATTATCGGGCCGGC
CCACGAGATGATGCTCCCACCGATCAAAAAGGTCTTTGGCAGACATGGAG
AAGGCCAAGCGTCCTTTGGATTCTTCCATTTCTTGTCATTTATATGCTAG
GATTCGGCGGCACTGCAGTGCCCAAGATTAACCTGATGATGTCTCTCATT
TGCAGAGACTATATGGCCAGAAAAGCGACCCAGGATCCAGGTTTCACGTA
TTTGCCTGTCATCATTGGGAATAAGAATTCGCAGTGTCAGACACCCGAAG
TTCAGTCATTACTTGCTCAGTTCCAGTTGTATTTCAATCTCCTGGCCGGG
ATACTATCTGCGCTAGCATGCCCCCGACTGGGTCACCTATCAGATCGCTA
CGGTAGGACAAAGATACTGGCCCTTAGCGCATTGGGGACCGTTTTGGCGG
AAGCTATCTTTGTCTTTGTCGCAGCCAAGCCAGACCTTGTATCTGTGAAT
GTGCTTCTAGTGGCTGCCATCGTCGATGGCGTCTGTGGTTCTTTCACCAC
CATCATGGCGCTGACAATGTCGTATGCCTCCGACTGCACCATCCCATCGA
AGCGGAGTGCGGGATTCGGGTATGTGTACGGCTCTCTTTTCGCCGGAGTT
GCAGCCGGGCCTCTGCTGGCGGCTATCTTGATCAAGCAATCAGGCCAGGC
ACTGAGTACCTTTGAGGCCTCATTGGCCATGCATGCGCTCTACCTCATTG
CGCTTATGACCATTATCCCGGAATCATTATCAACAGAACGTCAGCAGCAA
GCGCGAGACAATCATCGAAGAAAAGTCATCGACGAAGGGGAGGCAGGCTG
GCTGAGTCTGGAGAACCTCAACCCCAAAAGGCTAATTACACCTTTATCTG
TTTTGCTACCGCCAGTAGGACGTCCCAGCACGCTTTTCCCTAATCGTCAC
GGCGCGAGTCCGGCCTTGCGCAGAAATATTATTCTTCTTACAGCGATAGA
TACTATTGCATTTGGGGTCGCATTGGGAACCGCTCAAGTGGTCATTATTT
ATGCCGAGTACAAATTCGACTGGGGCAATGTGGAATCAAGCCTCTTCATA
TCAATTATCAGCATCGCCCGAGTCGTGAACCTCTTTGTTGTATATCCGAT
TATCACCGCAATCTTCCGTGAACCACACAAACCAGATCACATCGTTCCCG
GGTCCAGCACCTGCGAAGTTGTTCTTATACGACTTTCTCTCTTATTAGAC
ATGGCTGGCTATGTGGGATATGCTATGTCAAATCAGGGTTCCTTCATGGT
ATTCTCGGGAATAGTCACAGCGCTTGGCGGCATGGGGATACCGACAATGC
AATCATCTCTCACGAAACATGTCCCTCGGGAACGGTTAGGTCAGATCCTT
GGTGCGAAAGGACTCTTGCATGCGCTGGCTCGAGTGATTGCGCCAACCGC
TTGCAGTCTCCTTTACAGCCTGACGGTTGGAAAGTTCACTCCAGCGGTAT
TTGTTGTTCTGGGGGCCTTGTTCTTGCTCACCTTCTGTAGCAGTTTTTAC
ATTAAACCACATGGTAGGTGAATGTCCACAATCAGGGGCGACGCATCGCC
TGCTGCGCATGCCGAGGTTGGTTCGGGACTGCAAGCCGGTCTGGACGCCC
CTGCGCCAATTGATGCTGGACTTGAGACTTGGGAAGACACCCATGAGCGA
ACCCCATTATTGCAACAAGACAACGAAGAATCCCAACCGGAGCCTGATTA
TCGGGCCGGCCCACGAGATGATGCTCCCACCGATCAAAAAGGTCTTTGGC
AGACATGGAGAAGGCCAAGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004018KJC3_004018Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004018-T2KJC3_004018-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004018-T2.cdsKJC3_004018-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004018-T2.utr3p1KJC3_004018-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004018-T2.exon2KJC3_004018-T2.exon2Aspergillus niger KJC3exon
KJC3_004018-T2.exon1KJC3_004018-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004018-T2.utr5p1KJC3_004018-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3678230..3680609 -
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