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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3682818..3685453+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004020-T1 ID=KJC3_004020-T1|Name=KJC3_004020-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2636bp|location=Sequence derived from alignment at ch3:3682818..3685453+ (Aspergillus niger KJC3)
CAGTGACGATATAGATCTCCCCTCGGCTGCAGGCAGCAGAGGCCAAACAG
GCAGACACAACAGCCCCACTTGTTCCTGGTTACGATTCAAGTTGTCTTAA
CCTTTATACTTCCCTCTTTCAATTTCGATAATATCTTGATTGCTTTAAAC
GATTCCACAACATTCTACTATGGCGGACGGTAACCCACATCGGGAAGATG
AGGCGGCCGAGGAAGAAGAGGAGATTGATGAGACTGTACGCAAATTTACC
CATGAACTTGGACTGGAACTCTGGAACTGACAATAAGATCAGAGCTACAA
ACCAGTCAAAGATGCGGTCCTCTTCGCAATCGATGTCAGCGATTCCATGT
TGACGCCGCGCCCCTCGGCAGATCCTAAGAAACACACCCAAGAATCACCC
ACCACGGCAGCGCTCAAATGCGCCTATCACTTCATGCAACAACGAATCAT
ATCAAATCCACAAGACATGATGGGTGTTTTGCTGTTCGGGACCCAGGCGT
CCAAGTTCTTTGAAGAAGATGAAGACAGTCGGGGAGACCTGTCCTACCCC
AACTGCTACCTCTTCACTGATCTGGATGTTCCTTCGGCTCATGAGGTCAA
AGAACTTCGAGCACTGGTAGATGATGAAGGAGACTCAAGGGAGGTTCTAT
CTCCAGCGAAAGAGCAGGTCTCTATGGCAAACGTCCTATTTTGCGCCAAC
CAGATATTCACATCCAGAGCGCCAAATTTCCTCTCCCGGCGTTTGTTCAT
CATAACCGACAATGACAACCCCCATGGTGATGATAAAACCCTGCGGTCAG
CGGCGACTGTACGTGCTAAGGATCTTTACGATCTTGGTGTCACAATTGAG
CTGTTTCCGATCTCACGCCCTGAGCATGAGTTCAAGAACAGCAAGTTCTA
TGACGTAAGCTATCATACTCTATAGCAAAGTGGCAGGGGTCGATACTCAC
TACAGATACAAAGGATATTATCTACAAGTCATTGCCCAGCGATCCAGAGG
CGCCTGCATATCTACAATCTGATTCAAAAGCGGCGACTGCGACCGGGGAC
GGGATTTCACTCCTCAACACGCTTCTGTCCAGTATTAATTCGAGAACGGT
TCCGCGTCGCACTCATTTTTCGAACATGCCTTTAGAACTTGGCCCAGACT
TCAGAATTTCGGTATCGGGCTATATACTCTTACGAAGGCAAGCGCCCGCT
AGAAACTCCTTCATCTGGCTGAACGGCGAGAAGCCTGTGGTCGCGAAAGG
AGTGACTTCCCACTCCGCAGATGATACTGGCCGGACTGTCGAGAAATGGG
AGATCAGAAAGGCATATAAGTTCGGTGGCGACCAAGTAACCTTTTCGCCT
GATGAGCAGAAGGCGCTTAGGGATTTCGGTGAGCCAGTAATCCGGGTTAT
TGGGTTCAAGCCTATCACTGCGCTTCCATTCTGGGCAAACGTCAAGCACC
CATATTTTATCTATCCATCCGAGGAAGACTATGTAGGCTCCTCGCGAGTA
TTTTCCGCATTGCATCAGACTCTTTTGCGTTCCAAGAAGATGGCACTCGT
CTGGTTCATTGCGCGCAAGGGTGCTGGCCCCGTTCTCGCCGCTATGATCG
CAGGCGAAGAAAAGCTTGATGAGAATGGCGTACAAAAATACCCTCCTGGC
ATGTGGATTCTTCCCCTCCCCTTCGCAGACGATATCCGGCAGAACCCCGA
AACAACGTTGAATGTCGCCCCGGAGTCATTGATTGATCAGATGCGCGTGG
TCGTCCAGCAACTGCAGCTGCCGAAGGGAGTGTACGAGCCTCTCAAATAC
CCCAATCCATGTAAGTCACTGCTGTCTTGCATTGCTCGTATACGATGAAC
GAGAAGTTGACAGCCCGTGATCAGCCCTTCAATGGCATTACCGCATCCTA
CAAGCTCTCGCATTAGACGAAGATCTCCCTGAAAAACCAGAAGACAAAAC
CATTCCGAAATACCGCCAAATCGACAAGGTAAAACCACTACACCCAAGAA
ACAACCCTCCACGCATTCAACCTACTGACAATTGCACCGCAGCGCGCCGG
TGACTACGTATTATCCTGGGCCGACGAACTCGAAAAGCAATACGCCAAAA
CCTCAGCAGCGGCCCCTCGCCCAACCAGCACCCTCGTGAAACGAGGATCA
AAAGACCGAGCAAGCGAAACCGAGGACTCCAAGCCATCGAAAAAGATCAA
GGTTGAGGAAGACTCTGGAAGCCTAGAGGAGGAAGTCCGCAGGCATCACA
AGAAGGGAACGCTATCCAAGGTAAGCCACCACAGGCTTTCTACACGTCCT
CGTGATGGCAAATATGACATCGTATTAACCGGCGGTTTTCTAGCTTACGG
TCGCTATCCTCAAGGACTTCTTGACTTCCAATGGACGCTCAAATGCCGGT
AAGAAGGCGGATCTTATTGAGCGGGTAGAGGAGTTCTTGGAGCAGTGACA
TGGCGGGATTGTTGGATTCGCTAGTGCGCTTCTGTTGGTGGATGTCGTTA
TGTGGTGTCTTATCTCGGGTTAGGCGTTCGTGACCTGAGGACATGAGCTT
GTAATTAATGATGGGTTGGATGTCGCGGTATTCGTTCTTCAGCGAAACGT
AATGGACACGTATTTTAGGCGATGTACAGTTATAAA back to topCoding sequence (CDS) from alignment at ch3:3682818..3685453+ >KJC3_004020-T1 ID=KJC3_004020-T1|Name=KJC3_004020-T1|organism=Aspergillus niger KJC3|type=CDS|length=11772bp|location=Sequence derived from alignment at ch3:3682818..3685453+ (Aspergillus niger KJC3)
ATGGCGGACGGTAACCCACATCGGGAAGATGAGGCGGCCGAGGAAGAAGA
GGAGATTGATGAGACTAGCTACAAACCAGTCAAAGATGCGGTCCTCTTCG
CAATCGATGTCAGCGATTCCATGTTGACGCCGCGCCCCTCGGCAGATCCT
AAGAAACACACCCAAGAATCACCCACCACGGCAGCGCTCAAATGCGCCTA
TCACTTCATGCAACAACGAATCATATCAAATCCACAAGACATGATGGGTG
TTTTGCTGTTCGGGACCCAGGCGTCCAAGTTCTTTGAAGAAGATGAAGAC
AGTCGGGGAGACCTGTCCTACCCCAACTGCTACCTCTTCACTGATCTGGA
TGTTCCTTCGGCTCATGAGGTCAAAGAACTTCGAGCACTGGTAGATGATG
AAGGAGACTCAAGGGAGGTTCTATCTCCAGCGAAAGAGCAGGTCTCTATG
GCAAACGTCCTATTTTGCGCCAACCAGATATTCACATCCAGAGCGCCAAA
TTTCCTCTCCCGGCGTTTGTTCATCATAACCGACAATGACAACCCCCATG
GTGATGATAAAACCCTGCGGTCAGCGGCGACTGTACGTGCTAAGGATCTT
TACGATCTTGGTGTCACAATTGAGCTGTTTCCGATCTCACGCCCTGAGCA
TGAGTTCAAGAACAGCAAGTTCTATGACGATATTATCTACAAGTCATTGC
CCAGCGATCCAGAGGCGCCTGCATATCTACAATCTGATTCAAAAGCGGCG
ACTGCGACCGGGGACGGGATTTCACTCCTCAACACGCTTCTGTCCAGTAT
TAATTCGAGAACGGTTCCGCGTCGCACTCATTTTTCGAACATGCCTTTAG
AACTTGGCCCAGACTTCAGAATTTCGGTATCGGGCTATATACTCTTACGA
AGGCAAGCGCCCGCTAGAAACTCCTTCATCTGGCTGAACGGCGAGAAGCC
TGTGGTCGCGAAAGGAGTGACTTCCCACTCCGCAGATGATACTGGCCGGA
CTGTCGAGAAATGGGAGATCAGAAAGGCATATAAGTTCGGTGGCGACCAA
GTAACCTTTTCGCCTGATGAGCAGAAGGCGCTTAGGGATTTCGGTGAGCC
AGTAATCCGGGTTATTGGGTTCAAGCCTATCACTGCGCTTCCATTCTGGG
CAAACGTCAAGCACCCATATTTTATCTATCCATCCGAGGAAGACTATGTA
GGCTCCTCGCGAGTATTTTCCGCATTGCATCAGACTCTTTTGCGTTCCAA
GAAGATGGCACTCGTCTGGTTCATTGCGCGCAAGGGTGCTGGCCCCGTTC
TCGCCGCTATGATCGCAGGCGAAGAAAAGCTTGATGAGAATGGCGTACAA
AAATACCCTCCTGGCATGTGGATTCTTCCCCTCCCCTTCGCAGACGATAT
CCGGCAGAACCCCGAAACAACGTTGAATGTCGCCCCGGAGTCATTGATTG
ATCAGATGCGCGTGGTCGTCCAGCAACTGCAGCTGCCGAAGGGAGTGTAC
GAGCCTCTCAAATACCCCAATCCATCCCTTCAATGGCATTACCGCATCCT
ACAAGCTCTCGCATTAGACGAAGATCTCCCTGAAAAACCAGAAGACAAAA
CCATTCCGAAATACCGCCAAATCGACAAGCGCGCCGGTGACTACGTATTA
TCCTGGGCCGACGAACTCGAAAAGCAATACGCCAAAACCTCAGCAGCGGC
CCCTCGCCCAACCAGCACCCTCGTGAAACGAGGATCAAAAGACCGAGCAA
GCGAAACCGAGGACTCCAAGCCATCGAAAAAGATCAAGGTTGAGGAAGAC
TCTGGAAGCCTAGAGGAGGAAGTCCGCAGGCATCACAAGAAGGGAACGCT
ATCCAAGCTTACGGTCGCTATCCTCAAGGACTTCTTGACTTCCAATGGAC
GCTCAAATGCCGGTAAGAAGGCGGATCTTATTGAGCGGGTAGAGGAGTTC
TTGGAGCAGTGAATGGCGGACGGTAACCCACATCGGGAAGATGAGGCGGC
CGAGGAAGAAGAGGAGATTGATGAGACTAGCTACAAACCAGTCAAAGATG
CGGTCCTCTTCGCAATCGATGTCAGCGATTCCATGTTGACGCCGCGCCCC
TCGGCAGATCCTAAGAAACACACCCAAGAATCACCCACCACGGCAGCGCT
CAAATGCGCCTATCACTTCATGCAACAACGAATCATATCAAATCCACAAG
ACATGATGGGTGTTTTGCTGTTCGGGACCCAGGCGTCCAAGTTCTTTGAA
GAAGATGAAGACAGTCGGGGAGACCTGTCCTACCCCAACTGCTACCTCTT
CACTGATCTGGATGTTCCTTCGGCTCATGAGGTCAAAGAACTTCGAGCAC
TGGTAGATGATGAAGGAGACTCAAGGGAGGTTCTATCTCCAGCGAAAGAG
CAGGTCTCTATGGCAAACGTCCTATTTTGCGCCAACCAGATATTCACATC
CAGAGCGCCAAATTTCCTCTCCCGGCGTTTGTTCATCATAACCGACAATG
ACAACCCCCATGGTGATGATAAAACCCTGCGGTCAGCGGCGACTGTACGT
GCTAAGGATCTTTACGATCTTGGTGTCACAATTGAGCTGTTTCCGATCTC
ACGCCCTGAGCATGAGTTCAAGAACAGCAAGTTCTATGACGATATTATCT
ACAAGTCATTGCCCAGCGATCCAGAGGCGCCTGCATATCTACAATCTGAT
TCAAAAGCGGCGACTGCGACCGGGGACGGGATTTCACTCCTCAACACGCT
TCTGTCCAGTATTAATTCGAGAACGGTTCCGCGTCGCACTCATTTTTCGA
ACATGCCTTTAGAACTTGGCCCAGACTTCAGAATTTCGGTATCGGGCTAT
ATACTCTTACGAAGGCAAGCGCCCGCTAGAAACTCCTTCATCTGGCTGAA
CGGCGAGAAGCCTGTGGTCGCGAAAGGAGTGACTTCCCACTCCGCAGATG
ATACTGGCCGGACTGTCGAGAAATGGGAGATCAGAAAGGCATATAAGTTC
GGTGGCGACCAAGTAACCTTTTCGCCTGATGAGCAGAAGGCGCTTAGGGA
TTTCGGTGAGCCAGTAATCCGGGTTATTGGGTTCAAGCCTATCACTGCGC
TTCCATTCTGGGCAAACGTCAAGCACCCATATTTTATCTATCCATCCGAG
GAAGACTATGTAGGCTCCTCGCGAGTATTTTCCGCATTGCATCAGACTCT
TTTGCGTTCCAAGAAGATGGCACTCGTCTGGTTCATTGCGCGCAAGGGTG
CTGGCCCCGTTCTCGCCGCTATGATCGCAGGCGAAGAAAAGCTTGATGAG
AATGGCGTACAAAAATACCCTCCTGGCATGTGGATTCTTCCCCTCCCCTT
CGCAGACGATATCCGGCAGAACCCCGAAACAACGTTGAATGTCGCCCCGG
AGTCATTGATTGATCAGATGCGCGTGGTCGTCCAGCAACTGCAGCTGCCG
AAGGGAGTGTACGAGCCTCTCAAATACCCCAATCCATCCCTTCAATGGCA
TTACCGCATCCTACAAGCTCTCGCATTAGACGAAGATCTCCCTGAAAAAC
CAGAAGACAAAACCATTCCGAAATACCGCCAAATCGACAAGCGCGCCGGT
GACTACGTATTATCCTGGGCCGACGAACTCGAAAAGCAATACGCCAAAAC
CTCAGCAGCGGCCCCTCGCCCAACCAGCACCCTCGTGAAACGAGGATCAA
AAGACCGAGCAAGCGAAACCGAGGACTCCAAGCCATCGAAAAAGATCAAG
GTTGAGGAAGACTCTGGAAGCCTAGAGGAGGAAGTCCGCAGGCATCACAA
GAAGGGAACGCTATCCAAGCTTACGGTCGCTATCCTCAAGGACTTCTTGA
CTTCCAATGGACGCTCAAATGCCGGTAAGAAGGCGGATCTTATTGAGCGG
GTAGAGGAGTTCTTGGAGCAGTGAATGGCGGACGGTAACCCACATCGGGA
AGATGAGGCGGCCGAGGAAGAAGAGGAGATTGATGAGACTAGCTACAAAC
CAGTCAAAGATGCGGTCCTCTTCGCAATCGATGTCAGCGATTCCATGTTG
ACGCCGCGCCCCTCGGCAGATCCTAAGAAACACACCCAAGAATCACCCAC
CACGGCAGCGCTCAAATGCGCCTATCACTTCATGCAACAACGAATCATAT
CAAATCCACAAGACATGATGGGTGTTTTGCTGTTCGGGACCCAGGCGTCC
AAGTTCTTTGAAGAAGATGAAGACAGTCGGGGAGACCTGTCCTACCCCAA
CTGCTACCTCTTCACTGATCTGGATGTTCCTTCGGCTCATGAGGTCAAAG
AACTTCGAGCACTGGTAGATGATGAAGGAGACTCAAGGGAGGTTCTATCT
CCAGCGAAAGAGCAGGTCTCTATGGCAAACGTCCTATTTTGCGCCAACCA
GATATTCACATCCAGAGCGCCAAATTTCCTCTCCCGGCGTTTGTTCATCA
TAACCGACAATGACAACCCCCATGGTGATGATAAAACCCTGCGGTCAGCG
GCGACTGTACGTGCTAAGGATCTTTACGATCTTGGTGTCACAATTGAGCT
GTTTCCGATCTCACGCCCTGAGCATGAGTTCAAGAACAGCAAGTTCTATG
ACGATATTATCTACAAGTCATTGCCCAGCGATCCAGAGGCGCCTGCATAT
CTACAATCTGATTCAAAAGCGGCGACTGCGACCGGGGACGGGATTTCACT
CCTCAACACGCTTCTGTCCAGTATTAATTCGAGAACGGTTCCGCGTCGCA
CTCATTTTTCGAACATGCCTTTAGAACTTGGCCCAGACTTCAGAATTTCG
GTATCGGGCTATATACTCTTACGAAGGCAAGCGCCCGCTAGAAACTCCTT
CATCTGGCTGAACGGCGAGAAGCCTGTGGTCGCGAAAGGAGTGACTTCCC
ACTCCGCAGATGATACTGGCCGGACTGTCGAGAAATGGGAGATCAGAAAG
GCATATAAGTTCGGTGGCGACCAAGTAACCTTTTCGCCTGATGAGCAGAA
GGCGCTTAGGGATTTCGGTGAGCCAGTAATCCGGGTTATTGGGTTCAAGC
CTATCACTGCGCTTCCATTCTGGGCAAACGTCAAGCACCCATATTTTATC
TATCCATCCGAGGAAGACTATGTAGGCTCCTCGCGAGTATTTTCCGCATT
GCATCAGACTCTTTTGCGTTCCAAGAAGATGGCACTCGTCTGGTTCATTG
CGCGCAAGGGTGCTGGCCCCGTTCTCGCCGCTATGATCGCAGGCGAAGAA
AAGCTTGATGAGAATGGCGTACAAAAATACCCTCCTGGCATGTGGATTCT
TCCCCTCCCCTTCGCAGACGATATCCGGCAGAACCCCGAAACAACGTTGA
ATGTCGCCCCGGAGTCATTGATTGATCAGATGCGCGTGGTCGTCCAGCAA
CTGCAGCTGCCGAAGGGAGTGTACGAGCCTCTCAAATACCCCAATCCATC
CCTTCAATGGCATTACCGCATCCTACAAGCTCTCGCATTAGACGAAGATC
TCCCTGAAAAACCAGAAGACAAAACCATTCCGAAATACCGCCAAATCGAC
AAGCGCGCCGGTGACTACGTATTATCCTGGGCCGACGAACTCGAAAAGCA
ATACGCCAAAACCTCAGCAGCGGCCCCTCGCCCAACCAGCACCCTCGTGA
AACGAGGATCAAAAGACCGAGCAAGCGAAACCGAGGACTCCAAGCCATCG
AAAAAGATCAAGGTTGAGGAAGACTCTGGAAGCCTAGAGGAGGAAGTCCG
CAGGCATCACAAGAAGGGAACGCTATCCAAGCTTACGGTCGCTATCCTCA
AGGACTTCTTGACTTCCAATGGACGCTCAAATGCCGGTAAGAAGGCGGAT
CTTATTGAGCGGGTAGAGGAGTTCTTGGAGCAGTGAATGGCGGACGGTAA
CCCACATCGGGAAGATGAGGCGGCCGAGGAAGAAGAGGAGATTGATGAGA
CTAGCTACAAACCAGTCAAAGATGCGGTCCTCTTCGCAATCGATGTCAGC
GATTCCATGTTGACGCCGCGCCCCTCGGCAGATCCTAAGAAACACACCCA
AGAATCACCCACCACGGCAGCGCTCAAATGCGCCTATCACTTCATGCAAC
AACGAATCATATCAAATCCACAAGACATGATGGGTGTTTTGCTGTTCGGG
ACCCAGGCGTCCAAGTTCTTTGAAGAAGATGAAGACAGTCGGGGAGACCT
GTCCTACCCCAACTGCTACCTCTTCACTGATCTGGATGTTCCTTCGGCTC
ATGAGGTCAAAGAACTTCGAGCACTGGTAGATGATGAAGGAGACTCAAGG
GAGGTTCTATCTCCAGCGAAAGAGCAGGTCTCTATGGCAAACGTCCTATT
TTGCGCCAACCAGATATTCACATCCAGAGCGCCAAATTTCCTCTCCCGGC
GTTTGTTCATCATAACCGACAATGACAACCCCCATGGTGATGATAAAACC
CTGCGGTCAGCGGCGACTGTACGTGCTAAGGATCTTTACGATCTTGGTGT
CACAATTGAGCTGTTTCCGATCTCACGCCCTGAGCATGAGTTCAAGAACA
GCAAGTTCTATGACGATATTATCTACAAGTCATTGCCCAGCGATCCAGAG
GCGCCTGCATATCTACAATCTGATTCAAAAGCGGCGACTGCGACCGGGGA
CGGGATTTCACTCCTCAACACGCTTCTGTCCAGTATTAATTCGAGAACGG
TTCCGCGTCGCACTCATTTTTCGAACATGCCTTTAGAACTTGGCCCAGAC
TTCAGAATTTCGGTATCGGGCTATATACTCTTACGAAGGCAAGCGCCCGC
TAGAAACTCCTTCATCTGGCTGAACGGCGAGAAGCCTGTGGTCGCGAAAG
GAGTGACTTCCCACTCCGCAGATGATACTGGCCGGACTGTCGAGAAATGG
GAGATCAGAAAGGCATATAAGTTCGGTGGCGACCAAGTAACCTTTTCGCC
TGATGAGCAGAAGGCGCTTAGGGATTTCGGTGAGCCAGTAATCCGGGTTA
TTGGGTTCAAGCCTATCACTGCGCTTCCATTCTGGGCAAACGTCAAGCAC
CCATATTTTATCTATCCATCCGAGGAAGACTATGTAGGCTCCTCGCGAGT
ATTTTCCGCATTGCATCAGACTCTTTTGCGTTCCAAGAAGATGGCACTCG
TCTGGTTCATTGCGCGCAAGGGTGCTGGCCCCGTTCTCGCCGCTATGATC
GCAGGCGAAGAAAAGCTTGATGAGAATGGCGTACAAAAATACCCTCCTGG
CATGTGGATTCTTCCCCTCCCCTTCGCAGACGATATCCGGCAGAACCCCG
AAACAACGTTGAATGTCGCCCCGGAGTCATTGATTGATCAGATGCGCGTG
GTCGTCCAGCAACTGCAGCTGCCGAAGGGAGTGTACGAGCCTCTCAAATA
CCCCAATCCATCCCTTCAATGGCATTACCGCATCCTACAAGCTCTCGCAT
TAGACGAAGATCTCCCTGAAAAACCAGAAGACAAAACCATTCCGAAATAC
CGCCAAATCGACAAGCGCGCCGGTGACTACGTATTATCCTGGGCCGACGA
ACTCGAAAAGCAATACGCCAAAACCTCAGCAGCGGCCCCTCGCCCAACCA
GCACCCTCGTGAAACGAGGATCAAAAGACCGAGCAAGCGAAACCGAGGAC
TCCAAGCCATCGAAAAAGATCAAGGTTGAGGAAGACTCTGGAAGCCTAGA
GGAGGAAGTCCGCAGGCATCACAAGAAGGGAACGCTATCCAAGCTTACGG
TCGCTATCCTCAAGGACTTCTTGACTTCCAATGGACGCTCAAATGCCGGT
AAGAAGGCGGATCTTATTGAGCGGGTAGAGGAGTTCTTGGAGCAGTGAAT
GGCGGACGGTAACCCACATCGGGAAGATGAGGCGGCCGAGGAAGAAGAGG
AGATTGATGAGACTAGCTACAAACCAGTCAAAGATGCGGTCCTCTTCGCA
ATCGATGTCAGCGATTCCATGTTGACGCCGCGCCCCTCGGCAGATCCTAA
GAAACACACCCAAGAATCACCCACCACGGCAGCGCTCAAATGCGCCTATC
ACTTCATGCAACAACGAATCATATCAAATCCACAAGACATGATGGGTGTT
TTGCTGTTCGGGACCCAGGCGTCCAAGTTCTTTGAAGAAGATGAAGACAG
TCGGGGAGACCTGTCCTACCCCAACTGCTACCTCTTCACTGATCTGGATG
TTCCTTCGGCTCATGAGGTCAAAGAACTTCGAGCACTGGTAGATGATGAA
GGAGACTCAAGGGAGGTTCTATCTCCAGCGAAAGAGCAGGTCTCTATGGC
AAACGTCCTATTTTGCGCCAACCAGATATTCACATCCAGAGCGCCAAATT
TCCTCTCCCGGCGTTTGTTCATCATAACCGACAATGACAACCCCCATGGT
GATGATAAAACCCTGCGGTCAGCGGCGACTGTACGTGCTAAGGATCTTTA
CGATCTTGGTGTCACAATTGAGCTGTTTCCGATCTCACGCCCTGAGCATG
AGTTCAAGAACAGCAAGTTCTATGACGATATTATCTACAAGTCATTGCCC
AGCGATCCAGAGGCGCCTGCATATCTACAATCTGATTCAAAAGCGGCGAC
TGCGACCGGGGACGGGATTTCACTCCTCAACACGCTTCTGTCCAGTATTA
ATTCGAGAACGGTTCCGCGTCGCACTCATTTTTCGAACATGCCTTTAGAA
CTTGGCCCAGACTTCAGAATTTCGGTATCGGGCTATATACTCTTACGAAG
GCAAGCGCCCGCTAGAAACTCCTTCATCTGGCTGAACGGCGAGAAGCCTG
TGGTCGCGAAAGGAGTGACTTCCCACTCCGCAGATGATACTGGCCGGACT
GTCGAGAAATGGGAGATCAGAAAGGCATATAAGTTCGGTGGCGACCAAGT
AACCTTTTCGCCTGATGAGCAGAAGGCGCTTAGGGATTTCGGTGAGCCAG
TAATCCGGGTTATTGGGTTCAAGCCTATCACTGCGCTTCCATTCTGGGCA
AACGTCAAGCACCCATATTTTATCTATCCATCCGAGGAAGACTATGTAGG
CTCCTCGCGAGTATTTTCCGCATTGCATCAGACTCTTTTGCGTTCCAAGA
AGATGGCACTCGTCTGGTTCATTGCGCGCAAGGGTGCTGGCCCCGTTCTC
GCCGCTATGATCGCAGGCGAAGAAAAGCTTGATGAGAATGGCGTACAAAA
ATACCCTCCTGGCATGTGGATTCTTCCCCTCCCCTTCGCAGACGATATCC
GGCAGAACCCCGAAACAACGTTGAATGTCGCCCCGGAGTCATTGATTGAT
CAGATGCGCGTGGTCGTCCAGCAACTGCAGCTGCCGAAGGGAGTGTACGA
GCCTCTCAAATACCCCAATCCATCCCTTCAATGGCATTACCGCATCCTAC
AAGCTCTCGCATTAGACGAAGATCTCCCTGAAAAACCAGAAGACAAAACC
ATTCCGAAATACCGCCAAATCGACAAGCGCGCCGGTGACTACGTATTATC
CTGGGCCGACGAACTCGAAAAGCAATACGCCAAAACCTCAGCAGCGGCCC
CTCGCCCAACCAGCACCCTCGTGAAACGAGGATCAAAAGACCGAGCAAGC
GAAACCGAGGACTCCAAGCCATCGAAAAAGATCAAGGTTGAGGAAGACTC
TGGAAGCCTAGAGGAGGAAGTCCGCAGGCATCACAAGAAGGGAACGCTAT
CCAAGCTTACGGTCGCTATCCTCAAGGACTTCTTGACTTCCAATGGACGC
TCAAATGCCGGTAAGAAGGCGGATCTTATTGAGCGGGTAGAGGAGTTCTT
GGAGCAGTGAATGGCGGACGGTAACCCACATCGGGAAGATGAGGCGGCCG
AGGAAGAAGAGGAGATTGATGAGACTAGCTACAAACCAGTCAAAGATGCG
GTCCTCTTCGCAATCGATGTCAGCGATTCCATGTTGACGCCGCGCCCCTC
GGCAGATCCTAAGAAACACACCCAAGAATCACCCACCACGGCAGCGCTCA
AATGCGCCTATCACTTCATGCAACAACGAATCATATCAAATCCACAAGAC
ATGATGGGTGTTTTGCTGTTCGGGACCCAGGCGTCCAAGTTCTTTGAAGA
AGATGAAGACAGTCGGGGAGACCTGTCCTACCCCAACTGCTACCTCTTCA
CTGATCTGGATGTTCCTTCGGCTCATGAGGTCAAAGAACTTCGAGCACTG
GTAGATGATGAAGGAGACTCAAGGGAGGTTCTATCTCCAGCGAAAGAGCA
GGTCTCTATGGCAAACGTCCTATTTTGCGCCAACCAGATATTCACATCCA
GAGCGCCAAATTTCCTCTCCCGGCGTTTGTTCATCATAACCGACAATGAC
AACCCCCATGGTGATGATAAAACCCTGCGGTCAGCGGCGACTGTACGTGC
TAAGGATCTTTACGATCTTGGTGTCACAATTGAGCTGTTTCCGATCTCAC
GCCCTGAGCATGAGTTCAAGAACAGCAAGTTCTATGACGATATTATCTAC
AAGTCATTGCCCAGCGATCCAGAGGCGCCTGCATATCTACAATCTGATTC
AAAAGCGGCGACTGCGACCGGGGACGGGATTTCACTCCTCAACACGCTTC
TGTCCAGTATTAATTCGAGAACGGTTCCGCGTCGCACTCATTTTTCGAAC
ATGCCTTTAGAACTTGGCCCAGACTTCAGAATTTCGGTATCGGGCTATAT
ACTCTTACGAAGGCAAGCGCCCGCTAGAAACTCCTTCATCTGGCTGAACG
GCGAGAAGCCTGTGGTCGCGAAAGGAGTGACTTCCCACTCCGCAGATGAT
ACTGGCCGGACTGTCGAGAAATGGGAGATCAGAAAGGCATATAAGTTCGG
TGGCGACCAAGTAACCTTTTCGCCTGATGAGCAGAAGGCGCTTAGGGATT
TCGGTGAGCCAGTAATCCGGGTTATTGGGTTCAAGCCTATCACTGCGCTT
CCATTCTGGGCAAACGTCAAGCACCCATATTTTATCTATCCATCCGAGGA
AGACTATGTAGGCTCCTCGCGAGTATTTTCCGCATTGCATCAGACTCTTT
TGCGTTCCAAGAAGATGGCACTCGTCTGGTTCATTGCGCGCAAGGGTGCT
GGCCCCGTTCTCGCCGCTATGATCGCAGGCGAAGAAAAGCTTGATGAGAA
TGGCGTACAAAAATACCCTCCTGGCATGTGGATTCTTCCCCTCCCCTTCG
CAGACGATATCCGGCAGAACCCCGAAACAACGTTGAATGTCGCCCCGGAG
TCATTGATTGATCAGATGCGCGTGGTCGTCCAGCAACTGCAGCTGCCGAA
GGGAGTGTACGAGCCTCTCAAATACCCCAATCCATCCCTTCAATGGCATT
ACCGCATCCTACAAGCTCTCGCATTAGACGAAGATCTCCCTGAAAAACCA
GAAGACAAAACCATTCCGAAATACCGCCAAATCGACAAGCGCGCCGGTGA
CTACGTATTATCCTGGGCCGACGAACTCGAAAAGCAATACGCCAAAACCT
CAGCAGCGGCCCCTCGCCCAACCAGCACCCTCGTGAAACGAGGATCAAAA
GACCGAGCAAGCGAAACCGAGGACTCCAAGCCATCGAAAAAGATCAAGGT
TGAGGAAGACTCTGGAAGCCTAGAGGAGGAAGTCCGCAGGCATCACAAGA
AGGGAACGCTATCCAAGCTTACGGTCGCTATCCTCAAGGACTTCTTGACT
TCCAATGGACGCTCAAATGCCGGTAAGAAGGCGGATCTTATTGAGCGGGT
AGAGGAGTTCTTGGAGCAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
| GO:0043564 | Ku70:Ku80 complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003684 | damaged DNA binding |
| GO:0042162 | telomeric DNA binding |
| GO:0003678 | DNA helicase activity |
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000723 | telomere maintenance |
| GO:0006303 | double-strand break repair via nonhomologous end joining |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004020-T1.utr5p1 | KJC3_004020-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004020-T1.utr3p1 | KJC3_004020-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092617RY |
| DBxref | InterPro:IPR016194 |
| DBxref | InterPro:IPR005161 |
| DBxref | InterPro:IPR027388 |
| DBxref | InterPro:IPR006165 |
| DBxref | InterPro:IPR036465 |
| DBxref | InterPro:IPR005160 |
| DBxref | InterPro:IPR036361 |
| DBxref | InterPro:IPR003034 |
| DBxref | InterPro:IPR006164 |
| DBxref | PFAM:PF02037 |
| DBxref | PFAM:PF03731 |
| DBxref | PFAM:PF03730 |
| DBxref | PFAM:PF02735 |
| Product | ATP-dependent DNA helicase II subunit 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3682818..3685453 + |
|
