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KJC3_004021-T1, KJC3_004021-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004021-T1
Unique NameKJC3_004021-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3685795..3687317-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004021-T1 ID=KJC3_004021-T1|Name=KJC3_004021-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1523bp|location=Sequence derived from alignment at ch3:3685795..3687317- (Aspergillus niger KJC3)
CTCCTTTTAATGCTCGAAACTATCCTCTCCGTCTTTCATCTTTCTCGGTC
TTTCCCGACTCAAGTCATTCCTTACACCAACCCGTGTTGTGACAACATCC
ACCTTCATAGTCCTATGATTTCGTCACCTGCAGAAGAGAGGAACAGATTT
TAACCTGCATTACATCGATAACGGCCTTTCGATATTGGTCCTCGTTGGCG
TTTTCACCAATTCTTCTGGAAACAGTCCCGTACCGTGCACAGAAGCTACC
GTCCTTTAGCCATTCATCATGAGATGGGGCGCTCGCATAGCACTATGTGC
TAGTCTAGCACTCATCTTGCCCTTATATCTCTTGAAGATCCACCTCGAGG
ACCTTTGCGATCAGTATCGCGCGGGCGCATATCTGATCAATTGGCTGGAT
TTGCGCCCGCCGATGAACACATTAAATGGCTCTCGTCCTGTCACACCAGG
GGATAAAGTGATTGTGATGGCCAGGCTACAGGAAGAGCACACTGAATGGG
TCGAGCAGGAGCTACCAGAGTGAGTTTTTTTTGTCCTCCCCTTCCCAACC
CAATGTTTCGGCGCACTAATAGCTTCCCTCCACAGCTGGCAACGTGCCAT
ATACATCGTGAATCCCTCCAAAAAGGTCGCAGCTGACGGCACAACACTCA
CAACCCCGCTGAACAAGGGTCACGAGTCCATGGCTTATCTCACCTACCTA
ATTGATCACTACGACACCCTACCATCCACTATTGCTTTCCTTCATTCCCA
TCGCTCGGGTTTCCTGATGGCCTGGCATGTAGATGCGCCCTTACACGACA
ATGTCATTGCGATGAAATCCCTGCGTCTCAACTTCGTCCAAGACAATGGC
TATGTCAACCTCCGCTGCAACTGGAACCCGGGGTGCAAGCAGGGCCATCG
CACCAACCAGCACGTGACGGAAGAAGTCTTTGCAGAGATATTTGAGGGCA
CCAGCACCCCGCCTTTGAACTCCACCGGGGGCCTTACGATGCAAGATGAA
TACGACGAAGCTAAATACCAGAAGTTCCTGCAAATGCCGAAACAGATTGG
CGCGGCGTGCTGTGCGCAATTCGCCGTGTCCCGGGAGCAGGTCCACCAAC
GACCACGAGAGGACTACATCAAGATCCGCCAGTGGATAATCGATACCGAC
AAGGATGACGCCAGTAGTGGCCGTGTCATGGAATTTCTCTGGCATGTCAT
ATTCGGCAAAGAATCAATATAGTATGTTGCCTTTGCACACCTCCCCCGTC
TACCTGCTGAATGCGTCCTAAATACTAACACTTCGCTACTCTCAGCTGTC
CCGACGAAGAAGTCTGCTACTGTCAAGTTTATGGACAATGTTGATCATTG
TACGCATACCGTTAACGTTTCTGCTTTCATAAAAATACCCACGGCTTCTA
CTTGTATATATTACGATAGCTTCCTTTCGGCGCTCTCTTGCTTTGGTCTC
TCTTTCTTTCTTCTTTCCACATATTCTCCCATTTTGGTGACTTTTTTCGC
CCGTTTAGACTCATTTTTTGTGG
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Coding sequence (CDS) from alignment at ch3:3685795..3687317-

>KJC3_004021-T1 ID=KJC3_004021-T1|Name=KJC3_004021-T1|organism=Aspergillus niger KJC3|type=CDS|length=2808bp|location=Sequence derived from alignment at ch3:3685795..3687317- (Aspergillus niger KJC3)
CTGTCCCGACGAAGAAGTCTGCTACTGTCAAGTTTATGGACAATGTTGAC
TGGCAACGTGCCATATACATCGTGAATCCCTCCAAAAAGGTCGCAGCTGA
CGGCACAACACTCACAACCCCGCTGAACAAGGGTCACGAGTCCATGGCTT
ATCTCACCTACCTAATTGATCACTACGACACCCTACCATCCACTATTGCT
TTCCTTCATTCCCATCGCTCGGGTTTCCTGATGGCCTGGCATGTAGATGC
GCCCTTACACGACAATGTCATTGCGATGAAATCCCTGCGTCTCAACTTCG
TCCAAGACAATGGCTATGTCAACCTCCGCTGCAACTGGAACCCGGGGTGC
AAGCAGGGCCATCGCACCAACCAGCACGTGACGGAAGAAGTCTTTGCAGA
GATATTTGAGGGCACCAGCACCCCGCCTTTGAACTCCACCGGGGGCCTTA
CGATGCAAGATGAATACGACGAAGCTAAATACCAGAAGTTCCTGCAAATG
CCGAAACAGATTGGCGCGGCGTGCTGTGCGCAATTCGCCGTGTCCCGGGA
GCAGGTCCACCAACGACCACGAGAGGACTACATCAAGATCCGCCAGTGGA
TAATCGATACCGACAAGGATGACGCCAGTAGTGGCCGTGTCATGGAATTT
CTCTGGCATGTCATATTCGGCAAAGAATCAATATAATGAGATGGGGCGCT
CGCATAGCACTATGTGCTAGTCTAGCACTCATCTTGCCCTTATATCTCTT
GAAGATCCACCTCGAGGACCTTTGCGATCAGTATCGCGCGGGCGCATATC
TGATCAATTGGCTGGATTTGCGCCCGCCGATGAACACATTAAATGGCTCT
CGTCCTGTCACACCAGGGGATAAAGTGATTGTGATGGCCAGGCTACAGGA
AGAGCACACTGAATGGGTCGAGCAGGAGCTACCAGACTGTCCCGACGAAG
AAGTCTGCTACTGTCAAGTTTATGGACAATGTTGACTGGCAACGTGCCAT
ATACATCGTGAATCCCTCCAAAAAGGTCGCAGCTGACGGCACAACACTCA
CAACCCCGCTGAACAAGGGTCACGAGTCCATGGCTTATCTCACCTACCTA
ATTGATCACTACGACACCCTACCATCCACTATTGCTTTCCTTCATTCCCA
TCGCTCGGGTTTCCTGATGGCCTGGCATGTAGATGCGCCCTTACACGACA
ATGTCATTGCGATGAAATCCCTGCGTCTCAACTTCGTCCAAGACAATGGC
TATGTCAACCTCCGCTGCAACTGGAACCCGGGGTGCAAGCAGGGCCATCG
CACCAACCAGCACGTGACGGAAGAAGTCTTTGCAGAGATATTTGAGGGCA
CCAGCACCCCGCCTTTGAACTCCACCGGGGGCCTTACGATGCAAGATGAA
TACGACGAAGCTAAATACCAGAAGTTCCTGCAAATGCCGAAACAGATTGG
CGCGGCGTGCTGTGCGCAATTCGCCGTGTCCCGGGAGCAGGTCCACCAAC
GACCACGAGAGGACTACATCAAGATCCGCCAGTGGATAATCGATACCGAC
AAGGATGACGCCAGTAGTGGCCGTGTCATGGAATTTCTCTGGCATGTCAT
ATTCGGCAAAGAATCAATATAATGAGATGGGGCGCTCGCATAGCACTATG
TGCTAGTCTAGCACTCATCTTGCCCTTATATCTCTTGAAGATCCACCTCG
AGGACCTTTGCGATCAGTATCGCGCGGGCGCATATCTGATCAATTGGCTG
GATTTGCGCCCGCCGATGAACACATTAAATGGCTCTCGTCCTGTCACACC
AGGGGATAAAGTGATTGTGATGGCCAGGCTACAGGAAGAGCACACTGAAT
GGGTCGAGCAGGAGCTACCAGACTGTCCCGACGAAGAAGTCTGCTACTGT
CAAGTTTATGGACAATGTTGACTGGCAACGTGCCATATACATCGTGAATC
CCTCCAAAAAGGTCGCAGCTGACGGCACAACACTCACAACCCCGCTGAAC
AAGGGTCACGAGTCCATGGCTTATCTCACCTACCTAATTGATCACTACGA
CACCCTACCATCCACTATTGCTTTCCTTCATTCCCATCGCTCGGGTTTCC
TGATGGCCTGGCATGTAGATGCGCCCTTACACGACAATGTCATTGCGATG
AAATCCCTGCGTCTCAACTTCGTCCAAGACAATGGCTATGTCAACCTCCG
CTGCAACTGGAACCCGGGGTGCAAGCAGGGCCATCGCACCAACCAGCACG
TGACGGAAGAAGTCTTTGCAGAGATATTTGAGGGCACCAGCACCCCGCCT
TTGAACTCCACCGGGGGCCTTACGATGCAAGATGAATACGACGAAGCTAA
ATACCAGAAGTTCCTGCAAATGCCGAAACAGATTGGCGCGGCGTGCTGTG
CGCAATTCGCCGTGTCCCGGGAGCAGGTCCACCAACGACCACGAGAGGAC
TACATCAAGATCCGCCAGTGGATAATCGATACCGACAAGGATGACGCCAG
TAGTGGCCGTGTCATGGAATTTCTCTGGCATGTCATATTCGGCAAAGAAT
CAATATAATGAGATGGGGCGCTCGCATAGCACTATGTGCTAGTCTAGCAC
TCATCTTGCCCTTATATCTCTTGAAGATCCACCTCGAGGACCTTTGCGAT
CAGTATCGCGCGGGCGCATATCTGATCAATTGGCTGGATTTGCGCCCGCC
GATGAACACATTAAATGGCTCTCGTCCTGTCACACCAGGGGATAAAGTGA
TTGTGATGGCCAGGCTACAGGAAGAGCACACTGAATGGGTCGAGCAGGAG
CTACCAGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004021KJC3_004021Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004021-T1KJC3_004021-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004021-T1.cdsKJC3_004021-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004021-T1.utr3p1KJC3_004021-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004021-T1.exon3KJC3_004021-T1.exon3Aspergillus niger KJC3exon
KJC3_004021-T1.exon2KJC3_004021-T1.exon2Aspergillus niger KJC3exon
KJC3_004021-T1.exon1KJC3_004021-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004021-T1.utr5p1KJC3_004021-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-26)
DBxrefInterPro:IPR021838
DBxrefPFAM:PF11913
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3685795..3687317 -
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