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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3717877..3719801+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004029-T1 ID=KJC3_004029-T1|Name=KJC3_004029-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1925bp|location=Sequence derived from alignment at ch3:3717877..3719801+ (Aspergillus niger KJC3)
ATGAATAGAGCATAATTAATCTAATCGAACCACATCATGTCCGACAATAA
CGACAAAAACCCCAAAGACGATGCGCAGTCACGACAAGCAACCAAACGAC
TCCGCCAACTCTCCTCACACCTACCTCCCGACTACTCCGACGTCCTCTCC
CACATCAACACTCTCCGCACACTAGCCTCCACCCCCGACTCATCTCGCAG
AGGCTATATCCGTCAAAAGCAAGCCGGGAAGCTATGGGTTCGCGAGCGCC
TCGAACAACTCCTAGATCCCGATAGTTTCCAAGAAATCGGCTCGCTCTCG
GGCACTGTAACATGGGAGAAAACAGGACCTATGCGCGAGAAGCCCGTTTC
TTTTACCCCGAGTAATAATGTCCAAGGGGCGGGGAAATTGCGTGGTCGAA
GGATTCTTCTAACAGCGGATGATTTCACTCTCCGGAGTGGACATGCGGAT
GGAGCTTCGCATGGTAAAACGATCTATCTGGAGAAGCTGGCATTGGCGCT
GAGGTTGCCGGTTGTCAAGTTGGTGGATGGGAGCTCTGGGGGAGGCAGTG
TTACTACTATTCGCACGGCTGGTTGGAGTTATTTGCCGTATGTGTCAATG
TATAGGCACGTCGTTGAGCAACTGAATCAGGGGATTCCGAATTTGGGGGC
TGTGGTGGGGCCGGCTGTATGTATCCAATCCATCATCATTCACCTTCGAG
TGTTCGGATGTTTCAGCTGACAGTATAGATCGGACTGGGAGCTGCGCGAG
TAGTGTCCTGCCATTTCTCCGTCATGGCAGCGGATGTTGGATCGCTCTTC
AACGCAGGCCCAGAAGTAGTCAAGGGAGCCACGTTTGAGGAAGGTCTGGA
CTTTCAAACTCTAGGTGGCCCAATGATTCACTGCACGAATGGAACCATCG
ACAATCTAGCCGCCAATGAAGCTGAGTGTTACGAGCAGCTGCGCACCGTA
CTGAGCTATTTGCCCAACACTGGCCGGGAGGCACCGCCAGTCATTGCCGC
TGATGATCCAGAAGACCGCGAGGATGAGTCGCTGCGCCGGATTATCCCTC
GGCGGCAGACGCGCATGTACAATCCGTGGACTATTATCACCAGCGTCGTG
GATAAGGGATCATGGTTCGAGATTGGTGCGCTCTGGGGTCGCACTGCTAT
CGGGGGTCTGGCGCGCCTGGGAGGGCGGCCGGTGGGCGTGATATCGCTCA
ACTGTGAGGTGAACGGGGGAGCTCTGGATGCAGCCGGGAGCCAGAAGCTT
GCGCGGTTACTGAAGCTCTGTGATGTGATGAATCTGCCGGTTTTGCAGTT
TATTGACGTTCGTAAGTGATACGGTCTGTACTCCCCTTCCAAGACACTCT
CCGCTGATGATATACGATGTAGCGGGCTATGCTATCGGCACCGTTGCAGA
ACGAACCGCCACTATGCGCTGGGGAGTAGAATTAGGCAAGACGTATTTCA
CTACGACGATTCCCTTATTCAATGTAATTACGCGACGAGCCTATGGCGTG
GCTGGAGGTCTTATGCTCGGAGCGCGCGACCCGGTCATGCAAGTCGCTTG
GCCGTCCGGTCAATGGGGGTCATTACCGTTGGAAGGCGGGATTGAGGTCG
CACATCGCCACGAGCTGCGCGAGGCAGAGAAAGTAGGACAGAAGGAAGCC
CGGTATAAGGAGCTAGAAGAGGAGTATCGAAGGCTGATGAACCCGGTGCG
GACGGCGAATGCGTTTGGCGTTGAGGAGATCATTGACCCGAAGGATACTC
GGCGGGTGTGTTGCGCATGGGCGCAGCATGTATATGAGGTTATGATCCCG
GAGAGGCTGGCCGACCGTGCAGCAGGAAAGATTCAACCGGTTTTTATGTA
GGCTGCTATGGATCTGCATTTGCTGTGTCAGGTGGTGAAGAACCTGAAGA
TAGTATGGCCATTTATTACGCTAGC back to topCoding sequence (CDS) from alignment at ch3:3717877..3719801+ >KJC3_004029-T1 ID=KJC3_004029-T1|Name=KJC3_004029-T1|organism=Aspergillus niger KJC3|type=CDS|length=5076bp|location=Sequence derived from alignment at ch3:3717877..3719801+ (Aspergillus niger KJC3)
ATGTCCGACAATAACGACAAAAACCCCAAAGACGATGCGCAGTCACGACA
AGCAACCAAACGACTCCGCCAACTCTCCTCACACCTACCTCCCGACTACT
CCGACGTCCTCTCCCACATCAACACTCTCCGCACACTAGCCTCCACCCCC
GACTCATCTCGCAGAGGCTATATCCGTCAAAAGCAAGCCGGGAAGCTATG
GGTTCGCGAGCGCCTCGAACAACTCCTAGATCCCGATAGTTTCCAAGAAA
TCGGCTCGCTCTCGGGCACTGTAACATGGGAGAAAACAGGACCTATGCGC
GAGAAGCCCGTTTCTTTTACCCCGAGTAATAATGTCCAAGGGGCGGGGAA
ATTGCGTGGTCGAAGGATTCTTCTAACAGCGGATGATTTCACTCTCCGGA
GTGGACATGCGGATGGAGCTTCGCATGGTAAAACGATCTATCTGGAGAAG
CTGGCATTGGCGCTGAGGTTGCCGGTTGTCAAGTTGGTGGATGGGAGCTC
TGGGGGAGGCAGTGTTACTACTATTCGCACGGCTGGTTGGAGTTATTTGC
CGTATGTGTCAATGTATAGGCACGTCGTTGAGCAACTGAATCAGGGGATT
CCGAATTTGGGGGCTGTGGTGGGGCCGGCTATCGGACTGGGAGCTGCGCG
AGTAGTGTCCTGCCATTTCTCCGTCATGGCAGCGGATGTTGGATCGCTCT
TCAACGCAGGCCCAGAAGTAGTCAAGGGAGCCACGTTTGAGGAAGGTCTG
GACTTTCAAACTCTAGGTGGCCCAATGATTCACTGCACGAATGGAACCAT
CGACAATCTAGCCGCCAATGAAGCTGAGTGTTACGAGCAGCTGCGCACCG
TACTGAGCTATTTGCCCAACACTGGCCGGGAGGCACCGCCAGTCATTGCC
GCTGATGATCCAGAAGACCGCGAGGATGAGTCGCTGCGCCGGATTATCCC
TCGGCGGCAGACGCGCATGTACAATCCGTGGACTATTATCACCAGCGTCG
TGGATAAGGGATCATGGTTCGAGATTGGTGCGCTCTGGGGTCGCACTGCT
ATCGGGGGTCTGGCGCGCCTGGGAGGGCGGCCGGTGGGCGTGATATCGCT
CAACTGTGAGGTGAACGGGGGAGCTCTGGATGCAGCCGGGAGCCAGAAGC
TTGCGCGGTTACTGAAGCTCTGTGATGTGATGAATCTGCCGGTTTTGCAG
TTTATTGACGTTCCGGGCTATGCTATCGGCACCGTTGCAGAACGAACCGC
CACTATGCGCTGGGGAGTAGAATTAGGCAAGACGTATTTCACTACGACGA
TTCCCTTATTCAATGTAATTACGCGACGAGCCTATGGCGTGGCTGGAGGT
CTTATGCTCGGAGCGCGCGACCCGGTCATGCAAGTCGCTTGGCCGTCCGG
TCAATGGGGGTCATTACCGTTGGAAGGCGGGATTGAGGTCGCACATCGCC
ACGAGCTGCGCGAGGCAGAGAAAGTAGGACAGAAGGAAGCCCGGTATAAG
GAGCTAGAAGAGGAGTATCGAAGGCTGATGAACCCGGTGCGGACGGCGAA
TGCGTTTGGCGTTGAGGAGATCATTGACCCGAAGGATACTCGGCGGGTGT
GTTGCGCATGGGCGCAGCATGTATATGAGGTTATGATCCCGGAGAGGCTG
GCCGACCGTGCAGCAGGAAAGATTCAACCGGTTTTTATGTAGATGTCCGA
CAATAACGACAAAAACCCCAAAGACGATGCGCAGTCACGACAAGCAACCA
AACGACTCCGCCAACTCTCCTCACACCTACCTCCCGACTACTCCGACGTC
CTCTCCCACATCAACACTCTCCGCACACTAGCCTCCACCCCCGACTCATC
TCGCAGAGGCTATATCCGTCAAAAGCAAGCCGGGAAGCTATGGGTTCGCG
AGCGCCTCGAACAACTCCTAGATCCCGATAGTTTCCAAGAAATCGGCTCG
CTCTCGGGCACTGTAACATGGGAGAAAACAGGACCTATGCGCGAGAAGCC
CGTTTCTTTTACCCCGAGTAATAATGTCCAAGGGGCGGGGAAATTGCGTG
GTCGAAGGATTCTTCTAACAGCGGATGATTTCACTCTCCGGAGTGGACAT
GCGGATGGAGCTTCGCATGGTAAAACGATCTATCTGGAGAAGCTGGCATT
GGCGCTGAGGTTGCCGGTTGTCAAGTTGGTGGATGGGAGCTCTGGGGGAG
GCAGTGTTACTACTATTCGCACGGCTGGTTGGAGTTATTTGCCGTATGTG
TCAATGTATAGGCACGTCGTTGAGCAACTGAATCAGGGGATTCCGAATTT
GGGGGCTGTGGTGGGGCCGGCTATCGGACTGGGAGCTGCGCGAGTAGTGT
CCTGCCATTTCTCCGTCATGGCAGCGGATGTTGGATCGCTCTTCAACGCA
GGCCCAGAAGTAGTCAAGGGAGCCACGTTTGAGGAAGGTCTGGACTTTCA
AACTCTAGGTGGCCCAATGATTCACTGCACGAATGGAACCATCGACAATC
TAGCCGCCAATGAAGCTGAGTGTTACGAGCAGCTGCGCACCGTACTGAGC
TATTTGCCCAACACTGGCCGGGAGGCACCGCCAGTCATTGCCGCTGATGA
TCCAGAAGACCGCGAGGATGAGTCGCTGCGCCGGATTATCCCTCGGCGGC
AGACGCGCATGTACAATCCGTGGACTATTATCACCAGCGTCGTGGATAAG
GGATCATGGTTCGAGATTGGTGCGCTCTGGGGTCGCACTGCTATCGGGGG
TCTGGCGCGCCTGGGAGGGCGGCCGGTGGGCGTGATATCGCTCAACTGTG
AGGTGAACGGGGGAGCTCTGGATGCAGCCGGGAGCCAGAAGCTTGCGCGG
TTACTGAAGCTCTGTGATGTGATGAATCTGCCGGTTTTGCAGTTTATTGA
CGTTCCGGGCTATGCTATCGGCACCGTTGCAGAACGAACCGCCACTATGC
GCTGGGGAGTAGAATTAGGCAAGACGTATTTCACTACGACGATTCCCTTA
TTCAATGTAATTACGCGACGAGCCTATGGCGTGGCTGGAGGTCTTATGCT
CGGAGCGCGCGACCCGGTCATGCAAGTCGCTTGGCCGTCCGGTCAATGGG
GGTCATTACCGTTGGAAGGCGGGATTGAGGTCGCACATCGCCACGAGCTG
CGCGAGGCAGAGAAAGTAGGACAGAAGGAAGCCCGGTATAAGGAGCTAGA
AGAGGAGTATCGAAGGCTGATGAACCCGGTGCGGACGGCGAATGCGTTTG
GCGTTGAGGAGATCATTGACCCGAAGGATACTCGGCGGGTGTGTTGCGCA
TGGGCGCAGCATGTATATGAGGTTATGATCCCGGAGAGGCTGGCCGACCG
TGCAGCAGGAAAGATTCAACCGGTTTTTATGTAGATGTCCGACAATAACG
ACAAAAACCCCAAAGACGATGCGCAGTCACGACAAGCAACCAAACGACTC
CGCCAACTCTCCTCACACCTACCTCCCGACTACTCCGACGTCCTCTCCCA
CATCAACACTCTCCGCACACTAGCCTCCACCCCCGACTCATCTCGCAGAG
GCTATATCCGTCAAAAGCAAGCCGGGAAGCTATGGGTTCGCGAGCGCCTC
GAACAACTCCTAGATCCCGATAGTTTCCAAGAAATCGGCTCGCTCTCGGG
CACTGTAACATGGGAGAAAACAGGACCTATGCGCGAGAAGCCCGTTTCTT
TTACCCCGAGTAATAATGTCCAAGGGGCGGGGAAATTGCGTGGTCGAAGG
ATTCTTCTAACAGCGGATGATTTCACTCTCCGGAGTGGACATGCGGATGG
AGCTTCGCATGGTAAAACGATCTATCTGGAGAAGCTGGCATTGGCGCTGA
GGTTGCCGGTTGTCAAGTTGGTGGATGGGAGCTCTGGGGGAGGCAGTGTT
ACTACTATTCGCACGGCTGGTTGGAGTTATTTGCCGTATGTGTCAATGTA
TAGGCACGTCGTTGAGCAACTGAATCAGGGGATTCCGAATTTGGGGGCTG
TGGTGGGGCCGGCTATCGGACTGGGAGCTGCGCGAGTAGTGTCCTGCCAT
TTCTCCGTCATGGCAGCGGATGTTGGATCGCTCTTCAACGCAGGCCCAGA
AGTAGTCAAGGGAGCCACGTTTGAGGAAGGTCTGGACTTTCAAACTCTAG
GTGGCCCAATGATTCACTGCACGAATGGAACCATCGACAATCTAGCCGCC
AATGAAGCTGAGTGTTACGAGCAGCTGCGCACCGTACTGAGCTATTTGCC
CAACACTGGCCGGGAGGCACCGCCAGTCATTGCCGCTGATGATCCAGAAG
ACCGCGAGGATGAGTCGCTGCGCCGGATTATCCCTCGGCGGCAGACGCGC
ATGTACAATCCGTGGACTATTATCACCAGCGTCGTGGATAAGGGATCATG
GTTCGAGATTGGTGCGCTCTGGGGTCGCACTGCTATCGGGGGTCTGGCGC
GCCTGGGAGGGCGGCCGGTGGGCGTGATATCGCTCAACTGTGAGGTGAAC
GGGGGAGCTCTGGATGCAGCCGGGAGCCAGAAGCTTGCGCGGTTACTGAA
GCTCTGTGATGTGATGAATCTGCCGGTTTTGCAGTTTATTGACGTTCCGG
GCTATGCTATCGGCACCGTTGCAGAACGAACCGCCACTATGCGCTGGGGA
GTAGAATTAGGCAAGACGTATTTCACTACGACGATTCCCTTATTCAATGT
AATTACGCGACGAGCCTATGGCGTGGCTGGAGGTCTTATGCTCGGAGCGC
GCGACCCGGTCATGCAAGTCGCTTGGCCGTCCGGTCAATGGGGGTCATTA
CCGTTGGAAGGCGGGATTGAGGTCGCACATCGCCACGAGCTGCGCGAGGC
AGAGAAAGTAGGACAGAAGGAAGCCCGGTATAAGGAGCTAGAAGAGGAGT
ATCGAAGGCTGATGAACCCGGTGCGGACGGCGAATGCGTTTGGCGTTGAG
GAGATCATTGACCCGAAGGATACTCGGCGGGTGTGTTGCGCATGGGCGCA
GCATGTATATGAGGTTATGATCCCGGAGAGGCTGGCCGACCGTGCAGCAG
GAAAGATTCAACCGGTTTTTATGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016874 | ligase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004029-T1.utr5p1 | KJC3_004029-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004029-T1.utr3p1 | KJC3_004029-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029045 |
| DBxref | InterPro:IPR011762 |
| DBxref | InterPro:IPR011763 |
| DBxref | InterPro:IPR034733 |
| DBxref | PFAM:PF01039 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3717877..3719801 + |
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