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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3724277..3726295+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004033-T1 ID=KJC3_004033-T1|Name=KJC3_004033-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2019bp|location=Sequence derived from alignment at ch3:3724277..3726295+ (Aspergillus niger KJC3)
CTCCCCTTACTCCCAACTCCGCATATCTACCAACATGTCAGGCAGACGAC
CACCCAACCAACGGAGGATACCTTTCGGGGCACATAAGCAGATAACAGCT
CCCGAAAACGACTTAGAAGAATGGCCGCAGAACGATGACAACATAGCCCA
GCAACTCACAGAAGCACAACACAAGGTCTTAGAGCTCGACAGGGAAAACA
AGCAGCTAACAAGCCAAGTCCATGATCTGAATCAGGTGCTTGTTGAGCGA
GAACAGGCCTTCGCGCAATCAGAGCAAGAGCTGCGACGGACCCAAAGGGA
TCTAAAAGCCGTTGAAATCCAAATTAAGAAGAACGAGGAGCATGTACAAG
CCGCAGAGAGCGCAAATACTATGCTTAATGCGAAAAATAATGCGCAGGCT
GAGCAGATCCGTCGCATTCGCCAAGACTATAAGAAGCTCAAGGAAGAAGA
GACATCCCGCAGTGGTGAGATTGAAAAATTGCAGCAGCAGATACTTGACG
CGAGTCGAGAATTGAATGAAATCAAGCAGAAGCTTGACTTAAAGGAATCA
GAATTGGCAGCGCAAAAACTGGAGATGGGGCAGCTTGCTAAGACAGTAAA
TAGATACAAAGGGAACGATACTGAGTTAAGGAAGCAATTAAACAGGCTTG
CGGAGCAGGTGCATAAAATTGAACCTGCGATGGCACTAGATACTGTTGCA
CAGCCTACAAGTGCGATGAATACCGCACTGATTCCTTCTGCCCAGAACAA
GCTGATTACGCATAACCCCTTCGGCTTCAGCCTCCAGAATCCATCTCTAA
CACTGAGGCAGGAATTGGGAGGTAGCTTATATAGTGGATCGCAAAGTGCT
GCAAGTAGCGGAGCTCTGTCACCAGTGGACCAGAGAGGCAGCATAAGCAG
CAAGTTCAGCGCTCCAGTGATCCCTGCTCAGAATCAGAAACCATCTATTG
AGGCGGTTCCTGTAGACTGGAGCAATATCCAGCAGGCAGCTAAAACCGGT
GCGATACCGCATGTGGGACAAGCCCTTGTCCCTAGCACCAGTTTAAAGCG
ACCTTTTGCTGGATTGGAAGCCTTGCAGGGCTTTGATGGTTCGGAAGAGG
CGATCAAAAAGCTGCGTGTTGCTGCTGATCAGCAAAAGCTTGGGTCCAAC
CCAGACAACTCATTTTTGGCTGTTTTCCAGAAGTACTTGCAGACGTTGCA
GGAGGCGACTAATCAGAACCATAGTCAGCAAGAACAACTGGACGTCTTCA
AGAGAACTGTCCAAGCCCTGACCGCGCAAGGCAATACAAGCTTTGGAAAT
CAATTTTCGAACTCTCAGAGCAGCTGGATTCAAGATTATCAGAAGGCTGC
TGCACAGGCAGCGAATGATCCTTCAAAGGCTCAGCCCAAGGCTATAGTCA
CTGGCGTTAAACAGCCAAAAGGGTCAAAGCCCAAAGAAAAGCCGAAAAAA
TTCCTGACACGTACGCCGAATTATCAATGGCCAGTATATCTGGAAAAGAG
ATATAACCCGTCGACTCCATTGACGGTGCCACCCTTTCGAACGACACGAA
AGAAGTTTGCCAACTTTTCAGTCCCTGGTGCATATGAAGATGATCAGACT
GAGAGCACAGGATCGGAGTCAAAGTTAGAGTTTGAAACTGCGCCGGAGTA
CTTCGAAACTCAGGTCAGTGCCCCAGAGCAAGTACCGATGCCACCCGCTG
TCATAATGGCACGGTGGGCTTTAGTCTTGCTGGGAGTTTTTATAGTTGTG
ACGGCTATGGTTGAAAATTTATTCGGACGGACGAATGAAACGCAGGATAT
CTGGATGCAATATAATGAGGTACCTGAGGGTGTCTTGGCTAAAGTCCGTG
GCAGCAAACCCCCTGTTGTAGGGTCGATGCAGGGCTTGGATTACGAGTTT
GCCAAATTCGTCGATATCAGATCGCGCCTGGTGGGATGAGGAAAGTTTCC
ATGGTCGGTGAACCCGGTCTGCTGGTATGGAGCGGGTATACAGTTATATT
TCAGAATTTTCTATCTATG back to topCoding sequence (CDS) from alignment at ch3:3724277..3726295+ >KJC3_004033-T1 ID=KJC3_004033-T1|Name=KJC3_004033-T1|organism=Aspergillus niger KJC3|type=CDS|length=1905bp|location=Sequence derived from alignment at ch3:3724277..3726295+ (Aspergillus niger KJC3)
ATGTCAGGCAGACGACCACCCAACCAACGGAGGATACCTTTCGGGGCACA
TAAGCAGATAACAGCTCCCGAAAACGACTTAGAAGAATGGCCGCAGAACG
ATGACAACATAGCCCAGCAACTCACAGAAGCACAACACAAGGTCTTAGAG
CTCGACAGGGAAAACAAGCAGCTAACAAGCCAAGTCCATGATCTGAATCA
GGTGCTTGTTGAGCGAGAACAGGCCTTCGCGCAATCAGAGCAAGAGCTGC
GACGGACCCAAAGGGATCTAAAAGCCGTTGAAATCCAAATTAAGAAGAAC
GAGGAGCATGTACAAGCCGCAGAGAGCGCAAATACTATGCTTAATGCGAA
AAATAATGCGCAGGCTGAGCAGATCCGTCGCATTCGCCAAGACTATAAGA
AGCTCAAGGAAGAAGAGACATCCCGCAGTGGTGAGATTGAAAAATTGCAG
CAGCAGATACTTGACGCGAGTCGAGAATTGAATGAAATCAAGCAGAAGCT
TGACTTAAAGGAATCAGAATTGGCAGCGCAAAAACTGGAGATGGGGCAGC
TTGCTAAGACAGTAAATAGATACAAAGGGAACGATACTGAGTTAAGGAAG
CAATTAAACAGGCTTGCGGAGCAGGTGCATAAAATTGAACCTGCGATGGC
ACTAGATACTGTTGCACAGCCTACAAGTGCGATGAATACCGCACTGATTC
CTTCTGCCCAGAACAAGCTGATTACGCATAACCCCTTCGGCTTCAGCCTC
CAGAATCCATCTCTAACACTGAGGCAGGAATTGGGAGGTAGCTTATATAG
TGGATCGCAAAGTGCTGCAAGTAGCGGAGCTCTGTCACCAGTGGACCAGA
GAGGCAGCATAAGCAGCAAGTTCAGCGCTCCAGTGATCCCTGCTCAGAAT
CAGAAACCATCTATTGAGGCGGTTCCTGTAGACTGGAGCAATATCCAGCA
GGCAGCTAAAACCGGTGCGATACCGCATGTGGGACAAGCCCTTGTCCCTA
GCACCAGTTTAAAGCGACCTTTTGCTGGATTGGAAGCCTTGCAGGGCTTT
GATGGTTCGGAAGAGGCGATCAAAAAGCTGCGTGTTGCTGCTGATCAGCA
AAAGCTTGGGTCCAACCCAGACAACTCATTTTTGGCTGTTTTCCAGAAGT
ACTTGCAGACGTTGCAGGAGGCGACTAATCAGAACCATAGTCAGCAAGAA
CAACTGGACGTCTTCAAGAGAACTGTCCAAGCCCTGACCGCGCAAGGCAA
TACAAGCTTTGGAAATCAATTTTCGAACTCTCAGAGCAGCTGGATTCAAG
ATTATCAGAAGGCTGCTGCACAGGCAGCGAATGATCCTTCAAAGGCTCAG
CCCAAGGCTATAGTCACTGGCGTTAAACAGCCAAAAGGGTCAAAGCCCAA
AGAAAAGCCGAAAAAATTCCTGACACGTACGCCGAATTATCAATGGCCAG
TATATCTGGAAAAGAGATATAACCCGTCGACTCCATTGACGGTGCCACCC
TTTCGAACGACACGAAAGAAGTTTGCCAACTTTTCAGTCCCTGGTGCATA
TGAAGATGATCAGACTGAGAGCACAGGATCGGAGTCAAAGTTAGAGTTTG
AAACTGCGCCGGAGTACTTCGAAACTCAGGTCAGTGCCCCAGAGCAAGTA
CCGATGCCACCCGCTGTCATAATGGCACGGTGGGCTTTAGTCTTGCTGGG
AGTTTTTATAGTTGTGACGGCTATGGTTGAAAATTTATTCGGACGGACGA
ATGAAACGCAGGATATCTGGATGCAATATAATGAGGTACCTGAGGGTGTC
TTGGCTAAAGTCCGTGGCAGCAAACCCCCTGTTGTAGGGTCGATGCAGGG
CTTGGATTACGAGTTTGCCAAATTCGTCGATATCAGATCGCGCCTGGTGG
GATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004033-T1.utr5p1 | KJC3_004033-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004033-T1.utr3p1 | KJC3_004033-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3724277..3726295 + |
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