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KJC3_004051-T1, KJC3_004051-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004051-T1
Unique NameKJC3_004051-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3798620..3799954-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004051-T1 ID=KJC3_004051-T1|Name=KJC3_004051-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1335bp|location=Sequence derived from alignment at ch3:3798620..3799954- (Aspergillus niger KJC3)
GTCGCCTTTCTACAAGGCCATAAGCGAAACAACCACTTACAACACACCAC
CACCACAGGGAAAACCACATCAATGACAACTTTCACATAACGTGCTATCA
CTTGCGACCATCAACCTTACTTCAAATACCTACATCTCTCTCGCATTAAC
CATCCACCGTCACATGCATGTCGGCCGGGGGAGAACACCTCAAGGATGAG
GTACGCAGCCACCTCAGATCCCCATGCACCATCCATCCATTTAACAATCC
AGCCATGGACATCCCAGGCCCCTAGCACCATCTCTCAATCCTCAATCCAA
ATGCACAAGCTAATCAACTCTACAACTATCCAGGGCACACGACGACAAGT
CGTCCTAGCAGGCGGAATAGCCGGCCTCGTATCACGGTGCGCCCACACCC
ATATCCCCTAAAACAATCTTCCAAACAACCACCTAATCCATCAATATACA
TCCAGATTCTGCGTCGCCCCCCTCGACGTCGTCAAAATCCGCCTGCAGCT
ACAAATACATTCCCTATCGGACCCCATCTCCCACCGCGATGTAACCGGTC
CCATCTACAAGGGCACCCTCTCGACAATGCGAGATATCATCCGTCAAGAG
GGTATAACAGGCCTCTGGAAAGGCAACATCCCCGCCGAACTAATGTACGT
CTGCTACGGGGTGATCCAATTCAGCGCATACCGAACAACAACCCAAGCGC
TAGCACAACTCGACACCTATCGTCTTCCACCATCCGCAGAGTCCTTCGTC
GCGGGCGCCACAGCCGGAGGTCTCGCAACGGCATCTACATACCCACTGGA
TCTACTGAGGACGCGGTTCGCCGCGCAGGGCACGGACCGGGTGTACACGT
CGCTGATGTCGTCGGTGAGGGATATTGCGCGGAATGAAGGGTATGCCGGG
TTTTTTCGGGGGTGTAGTGCGGCGGTGGGACAGATTGTCCCGTATATGGG
ACTGTTCTTCGCGACGTATGAGGCGTTGAGGCCGCCGTTGGCGCAGTATC
AGGATTTGCCGTTTGGATCGGGGGATGCGGCGGCCGGTGTGATTGCGAGT
GTGTCGTCGAAGACGGTGATGTTTCCGTTGGATTTGATTCGGAAGAGGTT
GCAGGTGCAGGGCCCGACGCGGCAGTTATATATTCATCGCAATATTCCTG
AGTATCAGGGTGTGTTTAATACGATGAAATTGATCCTACGGACACAGGGT
ATCCGGGGACTTTATCGGGGCTTGACGGTCAGCTTGTTCAAGGCTGCTCC
CGCGAGTGCGGTGACGATGTGGACCTATGAGACTTCTTTACGGCTTCTCC
AGGATATGGAGGTAGCTACGAGCAAGGAGGATTGA
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Coding sequence (CDS) from alignment at ch3:3798620..3799954-

>KJC3_004051-T1 ID=KJC3_004051-T1|Name=KJC3_004051-T1|organism=Aspergillus niger KJC3|type=CDS|length=2898bp|location=Sequence derived from alignment at ch3:3798620..3799954- (Aspergillus niger KJC3)
ATTCTGCGTCGCCCCCCTCGACGTCGTCAAAATCCGCCTGCAGCTACAAA
TACATTCCCTATCGGACCCCATCTCCCACCGCGATGTAACCGGTCCCATC
TACAAGGGCACCCTCTCGACAATGCGAGATATCATCCGTCAAGAGGGTAT
AACAGGCCTCTGGAAAGGCAACATCCCCGCCGAACTAATGTACGTCTGCT
ACGGGGTGATCCAATTCAGCGCATACCGAACAACAACCCAAGCGCTAGCA
CAACTCGACACCTATCGTCTTCCACCATCCGCAGAGTCCTTCGTCGCGGG
CGCCACAGCCGGAGGTCTCGCAACGGCATCTACATACCCACTGGATCTAC
TGAGGACGCGGTTCGCCGCGCAGGGCACGGACCGGGTGTACACGTCGCTG
ATGTCGTCGGTGAGGGATATTGCGCGGAATGAAGGGTATGCCGGGTTTTT
TCGGGGGTGTAGTGCGGCGGTGGGACAGATTGTCCCGTATATGGGACTGT
TCTTCGCGACGTATGAGGCGTTGAGGCCGCCGTTGGCGCAGTATCAGGAT
TTGCCGTTTGGATCGGGGGATGCGGCGGCCGGTGTGATTGCGAGTGTGTC
GTCGAAGACGGTGATGTTTCCGTTGGATTTGATTCGGAAGAGGTTGCAGG
TGCAGGGCCCGACGCGGCAGTTATATATTCATCGCAATATTCCTGAGTAT
CAGGGTGTGTTTAATACGATGAAATTGATCCTACGGACACAGGGTATCCG
GGGACTTTATCGGGGCTTGACGGTCAGCTTGTTCAAGGCTGCTCCCGCGA
GTGCGGTGACGATGTGGACCTATGAGACTTCTTTACGGCTTCTCCAGGAT
ATGGAGGTAGCTACGAGCAAGGAGGATTGAGGCACACGACGACAAGTCGT
CCTAGCAGGCGGAATAGCCGGCCTCGTATCACGATGTCGGCCGGGGGAGA
ACACCTCAAGGATGAGATTCTGCGTCGCCCCCCTCGACGTCGTCAAAATC
CGCCTGCAGCTACAAATACATTCCCTATCGGACCCCATCTCCCACCGCGA
TGTAACCGGTCCCATCTACAAGGGCACCCTCTCGACAATGCGAGATATCA
TCCGTCAAGAGGGTATAACAGGCCTCTGGAAAGGCAACATCCCCGCCGAA
CTAATGTACGTCTGCTACGGGGTGATCCAATTCAGCGCATACCGAACAAC
AACCCAAGCGCTAGCACAACTCGACACCTATCGTCTTCCACCATCCGCAG
AGTCCTTCGTCGCGGGCGCCACAGCCGGAGGTCTCGCAACGGCATCTACA
TACCCACTGGATCTACTGAGGACGCGGTTCGCCGCGCAGGGCACGGACCG
GGTGTACACGTCGCTGATGTCGTCGGTGAGGGATATTGCGCGGAATGAAG
GGTATGCCGGGTTTTTTCGGGGGTGTAGTGCGGCGGTGGGACAGATTGTC
CCGTATATGGGACTGTTCTTCGCGACGTATGAGGCGTTGAGGCCGCCGTT
GGCGCAGTATCAGGATTTGCCGTTTGGATCGGGGGATGCGGCGGCCGGTG
TGATTGCGAGTGTGTCGTCGAAGACGGTGATGTTTCCGTTGGATTTGATT
CGGAAGAGGTTGCAGGTGCAGGGCCCGACGCGGCAGTTATATATTCATCG
CAATATTCCTGAGTATCAGGGTGTGTTTAATACGATGAAATTGATCCTAC
GGACACAGGGTATCCGGGGACTTTATCGGGGCTTGACGGTCAGCTTGTTC
AAGGCTGCTCCCGCGAGTGCGGTGACGATGTGGACCTATGAGACTTCTTT
ACGGCTTCTCCAGGATATGGAGGTAGCTACGAGCAAGGAGGATTGAGGCA
CACGACGACAAGTCGTCCTAGCAGGCGGAATAGCCGGCCTCGTATCACGA
TGTCGGCCGGGGGAGAACACCTCAAGGATGAGATTCTGCGTCGCCCCCCT
CGACGTCGTCAAAATCCGCCTGCAGCTACAAATACATTCCCTATCGGACC
CCATCTCCCACCGCGATGTAACCGGTCCCATCTACAAGGGCACCCTCTCG
ACAATGCGAGATATCATCCGTCAAGAGGGTATAACAGGCCTCTGGAAAGG
CAACATCCCCGCCGAACTAATGTACGTCTGCTACGGGGTGATCCAATTCA
GCGCATACCGAACAACAACCCAAGCGCTAGCACAACTCGACACCTATCGT
CTTCCACCATCCGCAGAGTCCTTCGTCGCGGGCGCCACAGCCGGAGGTCT
CGCAACGGCATCTACATACCCACTGGATCTACTGAGGACGCGGTTCGCCG
CGCAGGGCACGGACCGGGTGTACACGTCGCTGATGTCGTCGGTGAGGGAT
ATTGCGCGGAATGAAGGGTATGCCGGGTTTTTTCGGGGGTGTAGTGCGGC
GGTGGGACAGATTGTCCCGTATATGGGACTGTTCTTCGCGACGTATGAGG
CGTTGAGGCCGCCGTTGGCGCAGTATCAGGATTTGCCGTTTGGATCGGGG
GATGCGGCGGCCGGTGTGATTGCGAGTGTGTCGTCGAAGACGGTGATGTT
TCCGTTGGATTTGATTCGGAAGAGGTTGCAGGTGCAGGGCCCGACGCGGC
AGTTATATATTCATCGCAATATTCCTGAGTATCAGGGTGTGTTTAATACG
ATGAAATTGATCCTACGGACACAGGGTATCCGGGGACTTTATCGGGGCTT
GACGGTCAGCTTGTTCAAGGCTGCTCCCGCGAGTGCGGTGACGATGTGGA
CCTATGAGACTTCTTTACGGCTTCTCCAGGATATGGAGGTAGCTACGAGC
AAGGAGGATTGAGGCACACGACGACAAGTCGTCCTAGCAGGCGGAATAGC
CGGCCTCGTATCACGATGTCGGCCGGGGGAGAACACCTCAAGGATGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005347ATP transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TPC1KJC3_004051Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004051-T1KJC3_004051-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004051-T1.cdsKJC3_004051-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004051-T1.exon3KJC3_004051-T1.exon3Aspergillus niger KJC3exon
KJC3_004051-T1.exon2KJC3_004051-T1.exon2Aspergillus niger KJC3exon
KJC3_004051-T1.exon1KJC3_004051-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004051-T1.utr5p1KJC3_004051-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR023395
DBxrefInterPro:IPR018108
DBxrefInterPro:IPR002067
DBxrefPFAM:PF00153
Productmitochondrial thiamine pyrophosphate transporter
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3798620..3799954 -
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