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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3905980..3907252+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004084-T1 ID=KJC3_004084-T1|Name=KJC3_004084-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1273bp|location=Sequence derived from alignment at ch3:3905980..3907252+ (Aspergillus niger KJC3)
CTTGCTACTGGGTTAATGTCCGATTCCATGCTTACATTGATCCAGGGATA
CCTCACTGCTTCCCCCACTCCGCAAGCACATAAAGGCGTCCCTCGATTGT
CCTTCTCTTCCGTCCTCCAAGACAAACGGACATCTATCCCTTTCCATCAT
GCCGCCCTACGTACACACCGGTCCAGTGGACTGCTCCCAGGATGCAGACT
GCAGCGCCTTGACAGGCAAAACCGCCATCGTCACAGGCGGTGCCAACGGC
CTTGGGGAAGCCTATGTCCGCGCACTCGTCGCAGCCGGGTATGCTTCCCA
CCTCTTACACTTATTCGCGACTAATGCAAGTTCAACCACAGTGTCCGCGT
CTGTATTGGCGACATCGACACAGAGAAAGGCCAGAAACTCGAATCTGAGC
TACCAGGGTAAGTCCCTTCTTTCCCAATACTACCGTCATCCTACCCTGAC
TAGCCCCAAGCACCAAATTCATCCCCTGCTCAACCGGCACCTGGACCGAC
CAAGTCCGTCTATTTGAAGAAGCAGTCACCCTCTCTCCAACCAACCGCAT
CCACTACGTGATCGCCAACGCCGGCATCCACCGCGTAGATGAAATCTTCC
AGCCAGGACCCGAATCCCTCCCCGAACCAGACCTAAGCATCGTCGACATC
AACATCAAAGGCCCTCTCTACACGGCCAAACTAGCCATGCACTACTTCAT
CCGCCAGAACGGGACCACGCCCACCCCAGAGCAGGAAGATACATGCTTGA
TCCTCATCGGCTCCGGCGCCGGCTTCCTCGATGTGCCACGCTCACCGCAG
TACTGTGCCAGTAAATGGGCGATGCGGGGAATCATGCATTCCCTGCGTCG
GACGACGTATTACTACGGGTCCCGAGTAAACGTGATTAGTCCGTGGTATG
TGCACACCGGAATTTTGTCTGAGGAGGCATTTGCACATGTTAAGCGGGCC
GGGGTGGAGTTTGCCACAGCGGAGGATGCAGGACGCTGCTTGCTGAGGAT
CTTGGCAGATGGGAAGGTTAATGGGCATTCGTTCTTTGTGACGGCTCGGA
AGTGGGCGGAGAAGGGGTTTATGGATTTGGACTTGGAGGATTACGGGGAT
GATGCATTACTGGGGGAGGTGCAGGAGATGCAGATGTGCAGTGCCCCGGT
GGAAGCCGGGTTGTTTGGTTAGATGTTGTAGTGTAATCCGGTAGTTTGTC
GGCAATTATTGGACATGTTATTGAATTAGAATGAATATGGGACCATAATT
GAGGCCGAGGTCGGAGATAGCAT back to topCoding sequence (CDS) from alignment at ch3:3905980..3907252+ >KJC3_004084-T1 ID=KJC3_004084-T1|Name=KJC3_004084-T1|organism=Aspergillus niger KJC3|type=CDS|length=2754bp|location=Sequence derived from alignment at ch3:3905980..3907252+ (Aspergillus niger KJC3)
ATGCCGCCCTACGTACACACCGGTCCAGTGGACTGCTCCCAGGATGCAGA
CTGCAGCGCCTTGACAGGCAAAACCGCCATCGTCACAGGCGGTGCCAACG
GCCTTGGGGAAGCCTATGTCCGCGCACTCGTCGCAGCCGGTGTCCGCGTC
TGTATTGGCGACATCGACACAGAGAAAGGCCAGAAACTCGAATCTGAGCT
ACCAGGCACCAAATTCATCCCCTGCTCAACCGGCACCTGGACCGACCAAG
TCCGTCTATTTGAAGAAGCAGTCACCCTCTCTCCAACCAACCGCATCCAC
TACGTGATCGCCAACGCCGGCATCCACCGCGTAGATGAAATCTTCCAGCC
AGGACCCGAATCCCTCCCCGAACCAGACCTAAGCATCGTCGACATCAACA
TCAAAGGCCCTCTCTACACGGCCAAACTAGCCATGCACTACTTCATCCGC
CAGAACGGGACCACGCCCACCCCAGAGCAGGAAGATACATGCTTGATCCT
CATCGGCTCCGGCGCCGGCTTCCTCGATGTGCCACGCTCACCGCAGTACT
GTGCCAGTAAATGGGCGATGCGGGGAATCATGCATTCCCTGCGTCGGACG
ACGTATTACTACGGGTCCCGAGTAAACGTGATTAGTCCGTGGTATGTGCA
CACCGGAATTTTGTCTGAGGAGGCATTTGCACATGTTAAGCGGGCCGGGG
TGGAGTTTGCCACAGCGGAGGATGCAGGACGCTGCTTGCTGAGGATCTTG
GCAGATGGGAAGGTTAATGGGCATTCGTTCTTTGTGACGGCTCGGAAGTG
GGCGGAGAAGGGGTTTATGGATTTGGACTTGGAGGATTACGGGGATGATG
CATTACTGGGGGAGGTGCAGGAGATGCAGATGTGCAGTGCCCCGGTGGAA
GCCGGGTTGTTTGGTTAGATGCCGCCCTACGTACACACCGGTCCAGTGGA
CTGCTCCCAGGATGCAGACTGCAGCGCCTTGACAGGCAAAACCGCCATCG
TCACAGGCGGTGCCAACGGCCTTGGGGAAGCCTATGTCCGCGCACTCGTC
GCAGCCGGTGTCCGCGTCTGTATTGGCGACATCGACACAGAGAAAGGCCA
GAAACTCGAATCTGAGCTACCAGGCACCAAATTCATCCCCTGCTCAACCG
GCACCTGGACCGACCAAGTCCGTCTATTTGAAGAAGCAGTCACCCTCTCT
CCAACCAACCGCATCCACTACGTGATCGCCAACGCCGGCATCCACCGCGT
AGATGAAATCTTCCAGCCAGGACCCGAATCCCTCCCCGAACCAGACCTAA
GCATCGTCGACATCAACATCAAAGGCCCTCTCTACACGGCCAAACTAGCC
ATGCACTACTTCATCCGCCAGAACGGGACCACGCCCACCCCAGAGCAGGA
AGATACATGCTTGATCCTCATCGGCTCCGGCGCCGGCTTCCTCGATGTGC
CACGCTCACCGCAGTACTGTGCCAGTAAATGGGCGATGCGGGGAATCATG
CATTCCCTGCGTCGGACGACGTATTACTACGGGTCCCGAGTAAACGTGAT
TAGTCCGTGGTATGTGCACACCGGAATTTTGTCTGAGGAGGCATTTGCAC
ATGTTAAGCGGGCCGGGGTGGAGTTTGCCACAGCGGAGGATGCAGGACGC
TGCTTGCTGAGGATCTTGGCAGATGGGAAGGTTAATGGGCATTCGTTCTT
TGTGACGGCTCGGAAGTGGGCGGAGAAGGGGTTTATGGATTTGGACTTGG
AGGATTACGGGGATGATGCATTACTGGGGGAGGTGCAGGAGATGCAGATG
TGCAGTGCCCCGGTGGAAGCCGGGTTGTTTGGTTAGATGCCGCCCTACGT
ACACACCGGTCCAGTGGACTGCTCCCAGGATGCAGACTGCAGCGCCTTGA
CAGGCAAAACCGCCATCGTCACAGGCGGTGCCAACGGCCTTGGGGAAGCC
TATGTCCGCGCACTCGTCGCAGCCGGTGTCCGCGTCTGTATTGGCGACAT
CGACACAGAGAAAGGCCAGAAACTCGAATCTGAGCTACCAGGCACCAAAT
TCATCCCCTGCTCAACCGGCACCTGGACCGACCAAGTCCGTCTATTTGAA
GAAGCAGTCACCCTCTCTCCAACCAACCGCATCCACTACGTGATCGCCAA
CGCCGGCATCCACCGCGTAGATGAAATCTTCCAGCCAGGACCCGAATCCC
TCCCCGAACCAGACCTAAGCATCGTCGACATCAACATCAAAGGCCCTCTC
TACACGGCCAAACTAGCCATGCACTACTTCATCCGCCAGAACGGGACCAC
GCCCACCCCAGAGCAGGAAGATACATGCTTGATCCTCATCGGCTCCGGCG
CCGGCTTCCTCGATGTGCCACGCTCACCGCAGTACTGTGCCAGTAAATGG
GCGATGCGGGGAATCATGCATTCCCTGCGTCGGACGACGTATTACTACGG
GTCCCGAGTAAACGTGATTAGTCCGTGGTATGTGCACACCGGAATTTTGT
CTGAGGAGGCATTTGCACATGTTAAGCGGGCCGGGGTGGAGTTTGCCACA
GCGGAGGATGCAGGACGCTGCTTGCTGAGGATCTTGGCAGATGGGAAGGT
TAATGGGCATTCGTTCTTTGTGACGGCTCGGAAGTGGGCGGAGAAGGGGT
TTATGGATTTGGACTTGGAGGATTACGGGGATGATGCATTACTGGGGGAG
GTGCAGGAGATGCAGATGTGCAGTGCCCCGGTGGAAGCCGGGTTGTTTGG
TTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004084-T1.utr5p1 | KJC3_004084-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004084-T1.utr3p1 | KJC3_004084-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3905980..3907252 + |
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