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KJC3_004088-T1, KJC3_004088-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_004088-T1
Unique NameKJC3_004088-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3913519..3915461-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_004088-T1 ID=KJC3_004088-T1|Name=KJC3_004088-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1943bp|location=Sequence derived from alignment at ch3:3913519..3915461- (Aspergillus niger KJC3)
ATCCGCCCTCTGCGATCCTCCCCTCCAGCTTCTTCCCCAGACTCTCCCCT
CTGGGTTTTTTTTCCTCCTATCCCTTGTAATTCCTATATTCTGAGGGCCA
TCCCCAAATCAGACATCATGGCTCCCATCTCTATCGCAGACATCGTCGCC
GCTCTGCCGGCCGAAGACACCTGGGGCCCCGCTACCGCCAGCGACAACAT
GCTGCAGGGCGTCCCCTACGCTCCCTTCTCCAAGGGTGACAAGCTGGGTC
GTATGGCTGACTGGACTGCCGAGTCCAAGGACCCTAACCGTGCCGGTCGC
CAGGCCTACAACCGCAACTACAGAGGTATACCTTTATCCTAAATATATCC
TAGCCAAGCCAAGACCAAGCAACTAACTGTTTCCCTCCAGACCAGCAAGT
CTACGGTGCCGGTTCCTCCAGCCTCTTCGCCGTCCAGGTCGCCGAAGACG
AATCTTCCTTCTCCGTTGTCGACAACACCCGCAGCTCCGCTAAGCGTACC
TTCGGCCGTGGCGGTGGTACCGTCTTCCGTGGCCGCGCCCAGCGCGGTGG
TGCCCAGCGCGGTGGTCGTGCCGGCTTCCAGCGCGTGGGCGCTGGCCGTG
GCCAGGGTGGTGACCGCTACTACGACAACCGTTCTGGTGGCCGCGGCAAC
CGTGGCCGTCGCTTCGGCTGGAAGGACTACGACAAGCCCCAGCGCACCCG
TGAGCCTTCGGTCAACGTCCGCCCCGACTGGAACATGCTGGAGGAGGTTG
ACTTCAGCCGTCTGTCCAAGCTGAACCTCGAGGCCCCCGAGGGTGAGGAC
GTCGACTCGTATGGTTTCCTCTACCACTACGACCGGTCCTACGACAAGGC
GCCCGTCAAGAACGCCGAGCGCCGTCTCCAGTCCCTCGACCGTGCCGCCT
ACAACGTCACCACCACCCAGGACCCCGTCATCCAGGAACTGGCCGAGAAG
AACGAGGCCACCATCTTCGCCACCTCGGACATCCTGTCCATGCTCATGTG
CGCCCCCCGCAGTGTCTACTCCTGGGATATCGTCATCGTCCACCAGGGCA
ACAAGATCTACTTCGACAAGCGCGAAGGCGCCTCCCTGGACCTGGTCACC
GTTAACGAGAACGCCGCCGACGCTCCCCTCGAGCTGGCCGACTCCGCCAA
CAAGCAGGATGCCATCAACACCCCCAGCGCCCTGGCCATGGAAGCAACCT
TCATCAACCACAACTTCGCCCTGCAGACCGTTGTCGAGTCCGAGGACAGC
AAGGTCTCCCTGGCCCACCCTAACCCCTTCTACAACGCCGCCGAGGAGAC
CGAGCCCCTCGCCTCCAAGGCCTACAAGTACCGTCGCTTCGATCTCTCCC
TGGAGCGCGACGACGAGCCCGTCAACATGATCGTTCGTACCGAAGTCGAC
GCCATCATGAAGAACCCCGTCAACGGCGAGGACCAGCAGCTGCTCGTCAA
GGCCCTCAACGAGTTCGACAGCAAGGCCCAGGGCTCCGGCGGTGCCCTCG
ACTGGCGCAGCAAGCTCTGGTCCCAGCGCGGTGCCGTTGTTGCTACTGAG
ATGAAGAACAACAGCGTCAAGCTCGCCCGCTGGACCACCCAGGCCATCCT
CGCCAAGGCTGACGGCATGAAGCTGGGTTTCGTCTCTCGTGCTAACCCCC
GCTCGGCCGCTGGTCACGTCGTCCTCGGTGTTGTCGGCTACAAGCCCCGT
GATCTGGCTGCCCAGATGAACCTGAACCTCGGCAACGGTTGGGGTATCGT
GCGTACTATCGTCGACCGCATCCGTGCCCTCGATGCCGATGAGGATGAGG
ACAAGGTCACCAAGTACGTCCTTATCAAGGACCCCAACCGTCCTGTGCTG
CGTCTGTACAGCGTCCCTGCTACTACCTTTGAGGAGGAAGAGGAGGTCGC
TGCTGAGGAGCAGGAGGCTGCTGAGGAGGAGGCTGAGGAGTAA
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Coding sequence (CDS) from alignment at ch3:3913519..3915461-

>KJC3_004088-T1 ID=KJC3_004088-T1|Name=KJC3_004088-T1|organism=Aspergillus niger KJC3|type=CDS|length=3522bp|location=Sequence derived from alignment at ch3:3913519..3915461- (Aspergillus niger KJC3)
ACCAGCAAGTCTACGGTGCCGGTTCCTCCAGCCTCTTCGCCGTCCAGGTC
GCCGAAGACGAATCTTCCTTCTCCGTTGTCGACAACACCCGCAGCTCCGC
TAAGCGTACCTTCGGCCGTGGCGGTGGTACCGTCTTCCGTGGCCGCGCCC
AGCGCGGTGGTGCCCAGCGCGGTGGTCGTGCCGGCTTCCAGCGCGTGGGC
GCTGGCCGTGGCCAGGGTGGTGACCGCTACTACGACAACCGTTCTGGTGG
CCGCGGCAACCGTGGCCGTCGCTTCGGCTGGAAGGACTACGACAAGCCCC
AGCGCACCCGTGAGCCTTCGGTCAACGTCCGCCCCGACTGGAACATGCTG
GAGGAGGTTGACTTCAGCCGTCTGTCCAAGCTGAACCTCGAGGCCCCCGA
GGGTGAGGACGTCGACTCGTATGGTTTCCTCTACCACTACGACCGGTCCT
ACGACAAGGCGCCCGTCAAGAACGCCGAGCGCCGTCTCCAGTCCCTCGAC
CGTGCCGCCTACAACGTCACCACCACCCAGGACCCCGTCATCCAGGAACT
GGCCGAGAAGAACGAGGCCACCATCTTCGCCACCTCGGACATCCTGTCCA
TGCTCATGTGCGCCCCCCGCAGTGTCTACTCCTGGGATATCGTCATCGTC
CACCAGGGCAACAAGATCTACTTCGACAAGCGCGAAGGCGCCTCCCTGGA
CCTGGTCACCGTTAACGAGAACGCCGCCGACGCTCCCCTCGAGCTGGCCG
ACTCCGCCAACAAGCAGGATGCCATCAACACCCCCAGCGCCCTGGCCATG
GAAGCAACCTTCATCAACCACAACTTCGCCCTGCAGACCGTTGTCGAGTC
CGAGGACAGCAAGGTCTCCCTGGCCCACCCTAACCCCTTCTACAACGCCG
CCGAGGAGACCGAGCCCCTCGCCTCCAAGGCCTACAAGTACCGTCGCTTC
GATCTCTCCCTGGAGCGCGACGACGAGCCCGTCAACATGATCGTTCGTAC
CGAAGTCGACGCCATCATGAAGAACCCCGTCAACGGCGAGGACCAGCAGC
TGCTCGTCAAGGCCCTCAACGAGTTCGACAGCAAGGCCCAGGGCTCCGGC
GGTGCCCTCGACTGGCGCAGCAAGCTCTGGTCCCAGCGCGGTGCCGTTGT
TGCTACTGAGATGAAGAACAACAGCGTCAAGCTCGCCCGCTGGACCACCC
AGGCCATCCTCGCCAAGGCTGACGGCATGAAGCTGGGTTTCGTCTCTCGT
GCTAACCCCCGCTCGGCCGCTGGTCACGTCGTCCTCGGTGTTGTCGGCTA
CAAGCCCCGTGATCTGGCTGCCCAGATGAACCTGAACCTCGGCAACGGTT
GGGGTATCGTGCGTACTATCGTCGACCGCATCCGTGCCCTCGATGCCGAT
GAGGATGAGGACAAGGTCACCAAGTACGTCCTTATCAAGGACCCCAACCG
TCCTGTGCTGCGTCTGTACAGCGTCCCTGCTACTACCTTTGAGGAGGAAG
AGGAGGTCGCTGCTGAGGAGCAGGAGGCTGCTGAGGAGGAGGCTGAGGAG
TAAATGGCTCCCATCTCTATCGCAGACATCGTCGCCGCTCTGCCGGCCGA
AGACACCTGGGGCCCCGCTACCGCCAGCGACAACATGCTGCAGGGCGTCC
CCTACGCTCCCTTCTCCAAGGGTGACAAGCTGGGTCGTATGGCTGACTGG
ACTGCCGAGTCCAAGGACCCTAACCGTGCCGGTCGCCAGGCCTACAACCG
CAACTACAGAGACCAGCAAGTCTACGGTGCCGGTTCCTCCAGCCTCTTCG
CCGTCCAGGTCGCCGAAGACGAATCTTCCTTCTCCGTTGTCGACAACACC
CGCAGCTCCGCTAAGCGTACCTTCGGCCGTGGCGGTGGTACCGTCTTCCG
TGGCCGCGCCCAGCGCGGTGGTGCCCAGCGCGGTGGTCGTGCCGGCTTCC
AGCGCGTGGGCGCTGGCCGTGGCCAGGGTGGTGACCGCTACTACGACAAC
CGTTCTGGTGGCCGCGGCAACCGTGGCCGTCGCTTCGGCTGGAAGGACTA
CGACAAGCCCCAGCGCACCCGTGAGCCTTCGGTCAACGTCCGCCCCGACT
GGAACATGCTGGAGGAGGTTGACTTCAGCCGTCTGTCCAAGCTGAACCTC
GAGGCCCCCGAGGGTGAGGACGTCGACTCGTATGGTTTCCTCTACCACTA
CGACCGGTCCTACGACAAGGCGCCCGTCAAGAACGCCGAGCGCCGTCTCC
AGTCCCTCGACCGTGCCGCCTACAACGTCACCACCACCCAGGACCCCGTC
ATCCAGGAACTGGCCGAGAAGAACGAGGCCACCATCTTCGCCACCTCGGA
CATCCTGTCCATGCTCATGTGCGCCCCCCGCAGTGTCTACTCCTGGGATA
TCGTCATCGTCCACCAGGGCAACAAGATCTACTTCGACAAGCGCGAAGGC
GCCTCCCTGGACCTGGTCACCGTTAACGAGAACGCCGCCGACGCTCCCCT
CGAGCTGGCCGACTCCGCCAACAAGCAGGATGCCATCAACACCCCCAGCG
CCCTGGCCATGGAAGCAACCTTCATCAACCACAACTTCGCCCTGCAGACC
GTTGTCGAGTCCGAGGACAGCAAGGTCTCCCTGGCCCACCCTAACCCCTT
CTACAACGCCGCCGAGGAGACCGAGCCCCTCGCCTCCAAGGCCTACAAGT
ACCGTCGCTTCGATCTCTCCCTGGAGCGCGACGACGAGCCCGTCAACATG
ATCGTTCGTACCGAAGTCGACGCCATCATGAAGAACCCCGTCAACGGCGA
GGACCAGCAGCTGCTCGTCAAGGCCCTCAACGAGTTCGACAGCAAGGCCC
AGGGCTCCGGCGGTGCCCTCGACTGGCGCAGCAAGCTCTGGTCCCAGCGC
GGTGCCGTTGTTGCTACTGAGATGAAGAACAACAGCGTCAAGCTCGCCCG
CTGGACCACCCAGGCCATCCTCGCCAAGGCTGACGGCATGAAGCTGGGTT
TCGTCTCTCGTGCTAACCCCCGCTCGGCCGCTGGTCACGTCGTCCTCGGT
GTTGTCGGCTACAAGCCCCGTGATCTGGCTGCCCAGATGAACCTGAACCT
CGGCAACGGTTGGGGTATCGTGCGTACTATCGTCGACCGCATCCGTGCCC
TCGATGCCGATGAGGATGAGGACAAGGTCACCAAGTACGTCCTTATCAAG
GACCCCAACCGTCCTGTGCTGCGTCTGTACAGCGTCCCTGCTACTACCTT
TGAGGAGGAAGAGGAGGTCGCTGCTGAGGAGCAGGAGGCTGCTGAGGAGG
AGGCTGAGGAGTAAATGGCTCCCATCTCTATCGCAGACATCGTCGCCGCT
CTGCCGGCCGAAGACACCTGGGGCCCCGCTACCGCCAGCGACAACATGCT
GCAGGGCGTCCCCTACGCTCCCTTCTCCAAGGGTGACAAGCTGGGTCGTA
TGGCTGACTGGACTGCCGAGTCCAAGGACCCTAACCGTGCCGGTCGCCAG
GCCTACAACCGCAACTACAGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_004088KJC3_004088Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004088-T1KJC3_004088-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004088-T1.cdsKJC3_004088-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004088-T1.exon2KJC3_004088-T1.exon2Aspergillus niger KJC3exon
KJC3_004088-T1.exon1KJC3_004088-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_004088-T1.utr5p1KJC3_004088-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007783
DBxrefPFAM:PF05091
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3913519..3915461 -
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