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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3938727..3941767+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004102-T1 ID=KJC3_004102-T1|Name=KJC3_004102-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3041bp|location=Sequence derived from alignment at ch3:3938727..3941767+ (Aspergillus niger KJC3)
GTTGACTGCCCAAGCCTAAAGCGGCTCCGGTGAGAAAAAAGGAGTGACCC
TGAATTCAATTGTTGACTGGGGAGGATGGCAATCCATGGTTGCCACCCAC
GAGCAAAGCGTGGCTGAGCCCGCTGAATGGCCGGAGCTTTGCTGGAATTT
TCGGTTCGGGTACCCAGCAACCCCGGACTCACAGGACCAACACACTGACA
CCAGGGACGGAATCACCTCAGGGTCTGCTCAATCGGTGTGTCAAGGAACC
GTGTATATTTCCTATTGTGAGCTAGGAGATTTAGATCCCCAGCCGGAAAT
AGAGACGGGCAAGACAAGTGGGAGATCTGGCCCGCCGGCCACGCGAGTCT
GGCTGGCCGTTCCCGGCCTCTTTTCCCACTCTTCTGTCTGCACCAGCCCG
CGTCTGGCCTCATCTCCGCGCCTCTTCTCTCTAGATCTCTCTGGATCTCT
CTGGATCCAAAACAGCCCGCTTCCAAATCACTGGCCGCGATAGCTCGCGT
GTGTTATCCCGATTCTCATCTGACCGACCATGATCGTGGCTGAGACCGGT
CTGGGGACCCGTGGATGATCGGGATGATCTCGGCCAAATGCCTCAATTTG
ACTTTTGTCCGCGCCGTCATAGTCAATCCTCGGCACCCCCATGCTCTCTC
TCTCTCAGCCAGTCTAGTCGTCTACAGCTTCATGTTGGCTTGGCTTGTCT
CGAACTCGGGCACTGAGTGGTTCCTTCGTGTTTATCCCCCACTCATGGCG
CCCTCGGCCCAACGTTCTTCTCCAGACTCGGTACGTACAGTCGCAGTGAG
ACTGCGGAGTCTGGGGCCCCGTTCTCCCACCTCGCCCGATTCCGTGTCCA
GTGGCGTGCAGAGAATGACTGATTCCGGCCGGTCTGGTTGTCGGTCTGCC
GGGTCTGGGGACGAATCTACCTGCTCGCTGCCATCCCCGCGTCCCGCTCC
AAATACTACATAAAGGCCTCCATGTCCCGGGTCTGGGGTAGAATGGATCT
CTCATCATCTTACCTTCTCCGGCTCCATTGACTCTCACGCACTGCTACAT
TGCTCACCTAATCTACCTAATCTTTGCCTGACTCCACATCACCTACCTTT
AGTCGATTGCTGTGCCTCTGGTATCCCAATCATACCATGGGTTTCTTGTT
GAAGAGACCGGATGATGCGGTGGGCTCAGCGGCCCCCGCCATCATGATCG
GTCTGTTTGTCTCCTTTGGAGGTATCCTCTTCGGGTATGTACTTCTTTTC
CTCAGCCATGATGCGTTGGATATGGGGTCTGACCAGGATCTAAATAGATA
TGACACCGGAACCATCAGTGGTATCCTGGCCATGAAGTTCTGGCTGAAGA
TGTTCTCTACCGGATACATCAACCCCGCCGATGACTACCCCGATGTAACC
TCATCTCAGTCTTCCATGATTGTGTCATTGCTCTCTGCCGGTACTTTCTT
TGGAGCCCTGGCCTCTGCTCCTGTTGCGGATTACTTTGGTCGCCGCATTG
CCATGATCATCGAATCATTTGTCTTCTGCTTCGGTGTGATCCTCCAAACC
GCCGCCACCTCGATCCCGCTGTTCGTCGCTGGGCGGTTCTTTGCTGGCTT
TGGTGTTGGTCTACTCTCTGCAACTAGTAAGTCGACAAGAGGTCCCCATT
TCACCTAAGACACGTGCTAACTGGGACACAGTCCCTCTCTACCAGTCTGA
GACTGCCCCGAAGTGGATTCGTGGTACCATTGTCGGCGCCTATCAGCTGG
CCATTACTATTGGTCTGCTGCTGGCTTCTGTTGTCAACAATGCTACCAAG
GACCGCATGGACACTGGCTGCTACCGCATTCCGGTTGCCGTCCAGTTCGC
ATGGGCCATCATCCTCGTTGTCGGAATGAGTGTGCTCCCCGAAACGCCAC
GCTTCCTGATCAAGAAGGATAGACACGAGGCTGCGGCTAAGGCGCTTGCC
CGTCTTCGTCGGATGAATGTTGACGACCAGGCCGTCGTGGATGAGTTGGT
GGAAATCCGCGCCTCCCACGAGTACGAGATGAGCGTGGGCAAGGCGAGCT
TCCGCGAAATTGTGACTGGCTCCTTGGGTAAGCGGTTGGCCACCGGATGT
GCTGTGCAGGCGCTGCAACAACTCGCTGGAGTCAACTTCATCTGTAAGTG
TGCTTCTTTTACTTCTTGACAAAGGCCCCCGACTAACCGCTTTCAGTTTA
CTACGGAACGACCTTTTTCCAACGCTCCGGCATCCAGAACAGCTTTACCA
TCACGCTCATTACCAACATTGTCAACGTGGTCTCCACGTTCCCGGGTCTG
TACATGGTTGAGAAATGGGGTCGCCGGCCCTTGCTGCTGTTCGGTGCCGT
TGGCATGTGCGTGTGCCAGCTGATCGTAGCTATTGTGGGCATGGTGGCTT
CCTCGGACGTGGCCAATAAGGTCCTGATCGCCTTTGTCTGCATCTACATC
TTCTTCTTTGCCAGCTCTTGGGGCCCCGTCGCGTGGGTTGTGACCGGTGA
ACTGTACCCCCTCAAGGCTCGTGCCAAGTGTCTCTCCATCACGACGGCCA
CCAACTGGCTGCTGAACTGGGCCATCGCCTATGCCACCCCCTACATGGTG
GATTCCGGCCCGGGTAACGCGAACCTGCAATCCAAGGTGTTCTTCATCTG
GGGCGGCTTCTGCTTCATTGCGGGAGTGTTTGTGTACACCTGCATCTACG
AGACCAAGGGGCTCAGTCTGGAGCAGGTGGACGAGCTCTATTCGAAGGTG
TCGTCAGCCTGGCGCTCTCCAGGATTCATCCCTTCGGCGCATTTCGCCGG
TGCGGATACCGAAAAGGCCGGGCCGAGTGTGTACGAAGTGGAGGGTGAAC
TTCCTCAGAAGCGCGAGTCGCAGCACATTGAGACCGCTTAACCTGGAATC
TTTTTTAATGGCTTGGGATATGACTTTAATTGTTTGGATATGGCTGAATA
TGGTGTTTCTTTCTTTTTGTTTATATAGTTAGCCTATGATGTGATGTATT
TAGCGCACGATATGATATATACGACTCCGATTGAATCATCG back to topCoding sequence (CDS) from alignment at ch3:3938727..3941767+ >KJC3_004102-T1 ID=KJC3_004102-T1|Name=KJC3_004102-T1|organism=Aspergillus niger KJC3|type=CDS|length=4941bp|location=Sequence derived from alignment at ch3:3938727..3941767+ (Aspergillus niger KJC3)
ATGGGTTTCTTGTTGAAGAGACCGGATGATGCGGTGGGCTCAGCGGCCCC
CGCCATCATGATCGGTCTGTTTGTCTCCTTTGGAGGTATCCTCTTCGGGT
ATGTACTTCTTTTCCTCAGCCATGATGCGTTGGATATGGGGTCTGACCAG
GATCTAAATAGATATGACACCGGAACCATCAGTGGTATCCTGGCCATGAA
GTTCTGGCTGAAGATGTTCTCTACCGGATACATCAACCCCGCCGATGACT
ACCCCGATGTAACCTCATCTCAGTCTTCCATGATTGTGTCATTGCTCTCT
GCCGGTACTTTCTTTGGAGCCCTGGCCTCTGCTCCTGTTGCGGATTACTT
TGGTCGCCGCATTGCCATGATCATCGAATCATTTGTCTTCTGCTTCGGTG
TGATCCTCCAAACCGCCGCCACCTCGATCCCGCTGTTCGTCGCTGGGCGG
TTCTTTGCTGGCTTTGGTGTTGGTCTACTCTCTGCAACTATCCCTCTCTA
CCAGTCTGAGACTGCCCCGAAGTGGATTCGTGGTACCATTGTCGGCGCCT
ATCAGCTGGCCATTACTATTGGTCTGCTGCTGGCTTCTGTTGTCAACAAT
GCTACCAAGGACCGCATGGACACTGGCTGCTACCGCATTCCGGTTGCCGT
CCAGTTCGCATGGGCCATCATCCTCGTTGTCGGAATGAGTGTGCTCCCCG
AAACGCCACGCTTCCTGATCAAGAAGGATAGACACGAGGCTGCGGCTAAG
GCGCTTGCCCGTCTTCGTCGGATGAATGTTGACGACCAGGCCGTCGTGGA
TGAGTTGGTGGAAATCCGCGCCTCCCACGAGTACGAGATGAGCGTGGGCA
AGGCGAGCTTCCGCGAAATTGTGACTGGCTCCTTGGGTAAGCGGTTGGCC
ACCGGATGTGCTGTGCAGGCGCTGCAACAACTCGCTGGAGTCAACTTCAT
CTTTTACTACGGAACGACCTTTTTCCAACGCTCCGGCATCCAGAACAGCT
TTACCATCACGCTCATTACCAACATTGTCAACGTGGTCTCCACGTTCCCG
GGTCTGTACATGGTTGAGAAATGGGGTCGCCGGCCCTTGCTGCTGTTCGG
TGCCGTTGGCATGTGCGTGTGCCAGCTGATCGTAGCTATTGTGGGCATGG
TGGCTTCCTCGGACGTGGCCAATAAGGTCCTGATCGCCTTTGTCTGCATC
TACATCTTCTTCTTTGCCAGCTCTTGGGGCCCCGTCGCGTGGGTTGTGAC
CGGTGAACTGTACCCCCTCAAGGCTCGTGCCAAGTGTCTCTCCATCACGA
CGGCCACCAACTGGCTGCTGAACTGGGCCATCGCCTATGCCACCCCCTAC
ATGGTGGATTCCGGCCCGGGTAACGCGAACCTGCAATCCAAGGTGTTCTT
CATCTGGGGCGGCTTCTGCTTCATTGCGGGAGTGTTTGTGTACACCTGCA
TCTACGAGACCAAGGGGCTCAGTCTGGAGCAGGTGGACGAGCTCTATTCG
AAGGTGTCGTCAGCCTGGCGCTCTCCAGGATTCATCCCTTCGGCGCATTT
CGCCGGTGCGGATACCGAAAAGGCCGGGCCGAGTGTGTACGAAGTGGAGG
GTGAACTTCCTCAGAAGCGCGAGTCGCAGCACATTGAGACCGCTTAAATG
GGTTTCTTGTTGAAGAGACCGGATGATGCGGTGGGCTCAGCGGCCCCCGC
CATCATGATCGGTCTGTTTGTCTCCTTTGGAGGTATCCTCTTCGGGTATG
TACTTCTTTTCCTCAGCCATGATGCGTTGGATATGGGGTCTGACCAGGAT
CTAAATAGATATGACACCGGAACCATCAGTGGTATCCTGGCCATGAAGTT
CTGGCTGAAGATGTTCTCTACCGGATACATCAACCCCGCCGATGACTACC
CCGATGTAACCTCATCTCAGTCTTCCATGATTGTGTCATTGCTCTCTGCC
GGTACTTTCTTTGGAGCCCTGGCCTCTGCTCCTGTTGCGGATTACTTTGG
TCGCCGCATTGCCATGATCATCGAATCATTTGTCTTCTGCTTCGGTGTGA
TCCTCCAAACCGCCGCCACCTCGATCCCGCTGTTCGTCGCTGGGCGGTTC
TTTGCTGGCTTTGGTGTTGGTCTACTCTCTGCAACTATCCCTCTCTACCA
GTCTGAGACTGCCCCGAAGTGGATTCGTGGTACCATTGTCGGCGCCTATC
AGCTGGCCATTACTATTGGTCTGCTGCTGGCTTCTGTTGTCAACAATGCT
ACCAAGGACCGCATGGACACTGGCTGCTACCGCATTCCGGTTGCCGTCCA
GTTCGCATGGGCCATCATCCTCGTTGTCGGAATGAGTGTGCTCCCCGAAA
CGCCACGCTTCCTGATCAAGAAGGATAGACACGAGGCTGCGGCTAAGGCG
CTTGCCCGTCTTCGTCGGATGAATGTTGACGACCAGGCCGTCGTGGATGA
GTTGGTGGAAATCCGCGCCTCCCACGAGTACGAGATGAGCGTGGGCAAGG
CGAGCTTCCGCGAAATTGTGACTGGCTCCTTGGGTAAGCGGTTGGCCACC
GGATGTGCTGTGCAGGCGCTGCAACAACTCGCTGGAGTCAACTTCATCTT
TTACTACGGAACGACCTTTTTCCAACGCTCCGGCATCCAGAACAGCTTTA
CCATCACGCTCATTACCAACATTGTCAACGTGGTCTCCACGTTCCCGGGT
CTGTACATGGTTGAGAAATGGGGTCGCCGGCCCTTGCTGCTGTTCGGTGC
CGTTGGCATGTGCGTGTGCCAGCTGATCGTAGCTATTGTGGGCATGGTGG
CTTCCTCGGACGTGGCCAATAAGGTCCTGATCGCCTTTGTCTGCATCTAC
ATCTTCTTCTTTGCCAGCTCTTGGGGCCCCGTCGCGTGGGTTGTGACCGG
TGAACTGTACCCCCTCAAGGCTCGTGCCAAGTGTCTCTCCATCACGACGG
CCACCAACTGGCTGCTGAACTGGGCCATCGCCTATGCCACCCCCTACATG
GTGGATTCCGGCCCGGGTAACGCGAACCTGCAATCCAAGGTGTTCTTCAT
CTGGGGCGGCTTCTGCTTCATTGCGGGAGTGTTTGTGTACACCTGCATCT
ACGAGACCAAGGGGCTCAGTCTGGAGCAGGTGGACGAGCTCTATTCGAAG
GTGTCGTCAGCCTGGCGCTCTCCAGGATTCATCCCTTCGGCGCATTTCGC
CGGTGCGGATACCGAAAAGGCCGGGCCGAGTGTGTACGAAGTGGAGGGTG
AACTTCCTCAGAAGCGCGAGTCGCAGCACATTGAGACCGCTTAAATGGGT
TTCTTGTTGAAGAGACCGGATGATGCGGTGGGCTCAGCGGCCCCCGCCAT
CATGATCGGTCTGTTTGTCTCCTTTGGAGGTATCCTCTTCGGGTATGTAC
TTCTTTTCCTCAGCCATGATGCGTTGGATATGGGGTCTGACCAGGATCTA
AATAGATATGACACCGGAACCATCAGTGGTATCCTGGCCATGAAGTTCTG
GCTGAAGATGTTCTCTACCGGATACATCAACCCCGCCGATGACTACCCCG
ATGTAACCTCATCTCAGTCTTCCATGATTGTGTCATTGCTCTCTGCCGGT
ACTTTCTTTGGAGCCCTGGCCTCTGCTCCTGTTGCGGATTACTTTGGTCG
CCGCATTGCCATGATCATCGAATCATTTGTCTTCTGCTTCGGTGTGATCC
TCCAAACCGCCGCCACCTCGATCCCGCTGTTCGTCGCTGGGCGGTTCTTT
GCTGGCTTTGGTGTTGGTCTACTCTCTGCAACTATCCCTCTCTACCAGTC
TGAGACTGCCCCGAAGTGGATTCGTGGTACCATTGTCGGCGCCTATCAGC
TGGCCATTACTATTGGTCTGCTGCTGGCTTCTGTTGTCAACAATGCTACC
AAGGACCGCATGGACACTGGCTGCTACCGCATTCCGGTTGCCGTCCAGTT
CGCATGGGCCATCATCCTCGTTGTCGGAATGAGTGTGCTCCCCGAAACGC
CACGCTTCCTGATCAAGAAGGATAGACACGAGGCTGCGGCTAAGGCGCTT
GCCCGTCTTCGTCGGATGAATGTTGACGACCAGGCCGTCGTGGATGAGTT
GGTGGAAATCCGCGCCTCCCACGAGTACGAGATGAGCGTGGGCAAGGCGA
GCTTCCGCGAAATTGTGACTGGCTCCTTGGGTAAGCGGTTGGCCACCGGA
TGTGCTGTGCAGGCGCTGCAACAACTCGCTGGAGTCAACTTCATCTTTTA
CTACGGAACGACCTTTTTCCAACGCTCCGGCATCCAGAACAGCTTTACCA
TCACGCTCATTACCAACATTGTCAACGTGGTCTCCACGTTCCCGGGTCTG
TACATGGTTGAGAAATGGGGTCGCCGGCCCTTGCTGCTGTTCGGTGCCGT
TGGCATGTGCGTGTGCCAGCTGATCGTAGCTATTGTGGGCATGGTGGCTT
CCTCGGACGTGGCCAATAAGGTCCTGATCGCCTTTGTCTGCATCTACATC
TTCTTCTTTGCCAGCTCTTGGGGCCCCGTCGCGTGGGTTGTGACCGGTGA
ACTGTACCCCCTCAAGGCTCGTGCCAAGTGTCTCTCCATCACGACGGCCA
CCAACTGGCTGCTGAACTGGGCCATCGCCTATGCCACCCCCTACATGGTG
GATTCCGGCCCGGGTAACGCGAACCTGCAATCCAAGGTGTTCTTCATCTG
GGGCGGCTTCTGCTTCATTGCGGGAGTGTTTGTGTACACCTGCATCTACG
AGACCAAGGGGCTCAGTCTGGAGCAGGTGGACGAGCTCTATTCGAAGGTG
TCGTCAGCCTGGCGCTCTCCAGGATTCATCCCTTCGGCGCATTTCGCCGG
TGCGGATACCGAAAAGGCCGGGCCGAGTGTGTACGAAGTGGAGGGTGAAC
TTCCTCAGAAGCGCGAGTCGCAGCACATTGAGACCGCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004102-T1.utr5p1 | KJC3_004102-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004102-T1.utr3p1 | KJC3_004102-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR005828 |
| DBxref | InterPro:IPR003663 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3938727..3941767 + |
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