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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3979181..3981015+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004113-T2 ID=KJC3_004113-T2|Name=KJC3_004113-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1835bp|location=Sequence derived from alignment at ch3:3979181..3981015+ (Aspergillus niger KJC3)
GTCCTTACAGGGATCTCTATGGATGAATTTAGTAGGGCTCGCCTGGCGAT
CCCCGCCCGGATGACTTGCAAGGCTCCTGAATCTATTCCAATTGATCTTC
AACCGAGCTTCCTCTAACTCCCATCTGTAGTATACTGTTCCCTCAGACAC
TCATTCATCCACACCACTACCATCACCATCATGTCCTGGACCAAACAAAT
CGACCACTGGAGCCGTCCCCTTGACTGCCACGACCGCCTCTTTCAATTCA
TCGGCGAGTCAGGCAAACCACTCGGTCGCGAACACTGGCTCACCGTCGGC
GCCGTCCAGCTCGACTTCCCCAACAGCAGCCCCGAGATAACCATCCCACG
ACTCCGCAACGCCTGGAAATCTCTACGCATGCGCTACCCCGACATCGCAG
GCGAGCTCCATGGCCACGAAAAGCGCTACTACCCGATCACGAGCGCCTCA
GCCCTAGAATCCTGGTGCAACAACACCTTCAAAATCGAAGACTTAGCCCA
ATCCGCCGACGACCTCTTCACCCACCACCTGCGCATCGCCGACCGGCACG
CAACGGCACACTGGATCCCCAGCAGCCAGGAATTCTGCATCGTTTCAGCC
CACTGGCGCTGGGACGGCACCGGACTCGCCATGGTGCTGGACCAATTCCT
CTCCGAGCTTCAAAACCCCATCACCACCACCACAGCCTCCTTCGACGGCA
GCGAAGCCACCCGACTGATCCCCTCGCTCGACACCGTCATCGGTATGCCT
GCCTCCCCCGAAGCCAGAGACCCCGAATGGTCTCGTCGCGCCGACGAACT
CCTCGCTACCTTCCTCGAGGGCCAACCCTCGATCGGCCTGCCCGTGCTCA
ACCCCACAGCCTTACCCGCCAAGTCTCTCCGCACGGAGCATGTCATCCCC
GCGGAACAGGCGACCGCGCTACGTCGTGCCTGTCGCGCAAGAAACATCAC
TCTCACGACAGCTATGCATGCCTCTGCGATTATCGAGACTGCGCGTGCGG
CTAATTCTACCGATCCATCATCGCGCTACATCTCCTGGCAAGCCTTCGAT
CTCCGCAAATACCTGCCCCCACCCTACGACGGCCCCATCCACGGCCCGTC
CCTGCGCATGGTCGGCCTCCCGCTGAATGTCGAAGCCACGCCCACAACAA
GCTGGTCGGACCTCGTGGATACCATTCAGCCGCTGTACCGCCAGTCGTGG
AACTTGGCCGACAGTGACATGATGTTTGTACGGGTGCCGTTCGTGGAAAA
GGCCACGGCCATGTTCCAGGCTGCTGCTGCTGCGGGGGCGGCGCAGCCGA
CAGAACCAAATATTAATAGTTTGGGGCCTGTGGATCGGTTAATCAGGGAG
AGTTATGGGGAGGTCAAGGTCAAGGGTTTGGTGCTGATGGTGCAGATGTT
GGCGCAGCAGTTGTATGTGCATTGTTGGAGTTGGAGGGATGAGTTGCATT
TGAGTGCCAGTTATAATGAGGCGTATTATGAACCGGTGTTTGTGGAGGCG
TGGTTGAGGGCGATGAGGGAGAATATGGTGCGGAATTTGTTGGAGGATAC
TACGGATACGAATAAGGGTGCGTTGCTTTGATGGGTATTTCTATATTACT
TATCTATTCCCCCTTTTTCCTTTTTCCTTTTCTTTTTCTTTTTCTTTTTC
TTTGTTCTGTTCTGTTCTGTTTGTTTAGAGGTATGTTGCGTGGTTCTAAC
AATTGATAGAAACTATCGTCGGTTGATTATCGGCACTGTACAGTTGATAC
TTCTAGGTTTGAATGGGCGTTGGTTGGTTGGGTGTGGAATACGCTTGTTG
ACGCCACAGTGTTTGGGTAATGCAGGAGCTGGAAT back to topCoding sequence (CDS) from alignment at ch3:3979181..3981015+ >KJC3_004113-T2 ID=KJC3_004113-T2|Name=KJC3_004113-T2|organism=Aspergillus niger KJC3|type=CDS|length=4509bp|location=Sequence derived from alignment at ch3:3979181..3981015+ (Aspergillus niger KJC3)
ATGGATGAATTTAGTAGGGCTCGCCTGGCGATCCCCGCCCGGATGACTTT
ATACTGTTCCCTCAGACACTCATTCATCCACACCACTACCATCACCATCA
TGTCCTGGACCAAACAAATCGACCACTGGAGCCGTCCCCTTGACTGCCAC
GACCGCCTCTTTCAATTCATCGGCGAGTCAGGCAAACCACTCGGTCGCGA
ACACTGGCTCACCGTCGGCGCCGTCCAGCTCGACTTCCCCAACAGCAGCC
CCGAGATAACCATCCCACGACTCCGCAACGCCTGGAAATCTCTACGCATG
CGCTACCCCGACATCGCAGGCGAGCTCCATGGCCACGAAAAGCGCTACTA
CCCGATCACGAGCGCCTCAGCCCTAGAATCCTGGTGCAACAACACCTTCA
AAATCGAAGACTTAGCCCAATCCGCCGACGACCTCTTCACCCACCACCTG
CGCATCGCCGACCGGCACGCAACGGCACACTGGATCCCCAGCAGCCAGGA
ATTCTGCATCGTTTCAGCCCACTGGCGCTGGGACGGCACCGGACTCGCCA
TGGTGCTGGACCAATTCCTCTCCGAGCTTCAAAACCCCATCACCACCACC
ACAGCCTCCTTCGACGGCAGCGAAGCCACCCGACTGATCCCCTCGCTCGA
CACCGTCATCGGTATGCCTGCCTCCCCCGAAGCCAGAGACCCCGAATGGT
CTCGTCGCGCCGACGAACTCCTCGCTACCTTCCTCGAGGGCCAACCCTCG
ATCGGCCTGCCCGTGCTCAACCCCACAGCCTTACCCGCCAAGTCTCTCCG
CACGGAGCATGTCATCCCCGCGGAACAGGCGACCGCGCTACGTCGTGCCT
GTCGCGCAAGAAACATCACTCTCACGACAGCTATGCATGCCTCTGCGATT
ATCGAGACTGCGCGTGCGGCTAATTCTACCGATCCATCATCGCGCTACAT
CTCCTGGCAAGCCTTCGATCTCCGCAAATACCTGCCCCCACCCTACGACG
GCCCCATCCACGGCCCGTCCCTGCGCATGGTCGGCCTCCCGCTGAATGTC
GAAGCCACGCCCACAACAAGCTGGTCGGACCTCGTGGATACCATTCAGCC
GCTGTACCGCCAGTCGTGGAACTTGGCCGACAGTGACATGATGTTTGTAC
GGGTGCCGTTCGTGGAAAAGGCCACGGCCATGTTCCAGGCTGCTGCTGCT
GCGGGGGCGGCGCAGCCGACAGAACCAAATATTAATAGTTTGGGGCCTGT
GGATCGGTTAATCAGGGAGAGTTATGGGGAGGTCAAGGTCAAGGGTTTGG
TGCTGATGGTGCAGATGTTGGCGCAGCAGTTGTATGTGCATTGTTGGAGT
TGGAGGGATGAGTTGCATTTGAGTGCCAGTTATAATGAGGCGTATTATGA
ACCGGTGTTTGTGGAGGCGTGGTTGAGGGCGATGAGGGAGAATATGGTGC
GGAATTTGTTGGAGGATACTACGGATACGAATAAGGAAACTATCGTCGGT
TGAATGGATGAATTTAGTAGGGCTCGCCTGGCGATCCCCGCCCGGATGAC
TTTATACTGTTCCCTCAGACACTCATTCATCCACACCACTACCATCACCA
TCATGTCCTGGACCAAACAAATCGACCACTGGAGCCGTCCCCTTGACTGC
CACGACCGCCTCTTTCAATTCATCGGCGAGTCAGGCAAACCACTCGGTCG
CGAACACTGGCTCACCGTCGGCGCCGTCCAGCTCGACTTCCCCAACAGCA
GCCCCGAGATAACCATCCCACGACTCCGCAACGCCTGGAAATCTCTACGC
ATGCGCTACCCCGACATCGCAGGCGAGCTCCATGGCCACGAAAAGCGCTA
CTACCCGATCACGAGCGCCTCAGCCCTAGAATCCTGGTGCAACAACACCT
TCAAAATCGAAGACTTAGCCCAATCCGCCGACGACCTCTTCACCCACCAC
CTGCGCATCGCCGACCGGCACGCAACGGCACACTGGATCCCCAGCAGCCA
GGAATTCTGCATCGTTTCAGCCCACTGGCGCTGGGACGGCACCGGACTCG
CCATGGTGCTGGACCAATTCCTCTCCGAGCTTCAAAACCCCATCACCACC
ACCACAGCCTCCTTCGACGGCAGCGAAGCCACCCGACTGATCCCCTCGCT
CGACACCGTCATCGGTATGCCTGCCTCCCCCGAAGCCAGAGACCCCGAAT
GGTCTCGTCGCGCCGACGAACTCCTCGCTACCTTCCTCGAGGGCCAACCC
TCGATCGGCCTGCCCGTGCTCAACCCCACAGCCTTACCCGCCAAGTCTCT
CCGCACGGAGCATGTCATCCCCGCGGAACAGGCGACCGCGCTACGTCGTG
CCTGTCGCGCAAGAAACATCACTCTCACGACAGCTATGCATGCCTCTGCG
ATTATCGAGACTGCGCGTGCGGCTAATTCTACCGATCCATCATCGCGCTA
CATCTCCTGGCAAGCCTTCGATCTCCGCAAATACCTGCCCCCACCCTACG
ACGGCCCCATCCACGGCCCGTCCCTGCGCATGGTCGGCCTCCCGCTGAAT
GTCGAAGCCACGCCCACAACAAGCTGGTCGGACCTCGTGGATACCATTCA
GCCGCTGTACCGCCAGTCGTGGAACTTGGCCGACAGTGACATGATGTTTG
TACGGGTGCCGTTCGTGGAAAAGGCCACGGCCATGTTCCAGGCTGCTGCT
GCTGCGGGGGCGGCGCAGCCGACAGAACCAAATATTAATAGTTTGGGGCC
TGTGGATCGGTTAATCAGGGAGAGTTATGGGGAGGTCAAGGTCAAGGGTT
TGGTGCTGATGGTGCAGATGTTGGCGCAGCAGTTGTATGTGCATTGTTGG
AGTTGGAGGGATGAGTTGCATTTGAGTGCCAGTTATAATGAGGCGTATTA
TGAACCGGTGTTTGTGGAGGCGTGGTTGAGGGCGATGAGGGAGAATATGG
TGCGGAATTTGTTGGAGGATACTACGGATACGAATAAGGAAACTATCGTC
GGTTGAATGGATGAATTTAGTAGGGCTCGCCTGGCGATCCCCGCCCGGAT
GACTTTATACTGTTCCCTCAGACACTCATTCATCCACACCACTACCATCA
CCATCATGTCCTGGACCAAACAAATCGACCACTGGAGCCGTCCCCTTGAC
TGCCACGACCGCCTCTTTCAATTCATCGGCGAGTCAGGCAAACCACTCGG
TCGCGAACACTGGCTCACCGTCGGCGCCGTCCAGCTCGACTTCCCCAACA
GCAGCCCCGAGATAACCATCCCACGACTCCGCAACGCCTGGAAATCTCTA
CGCATGCGCTACCCCGACATCGCAGGCGAGCTCCATGGCCACGAAAAGCG
CTACTACCCGATCACGAGCGCCTCAGCCCTAGAATCCTGGTGCAACAACA
CCTTCAAAATCGAAGACTTAGCCCAATCCGCCGACGACCTCTTCACCCAC
CACCTGCGCATCGCCGACCGGCACGCAACGGCACACTGGATCCCCAGCAG
CCAGGAATTCTGCATCGTTTCAGCCCACTGGCGCTGGGACGGCACCGGAC
TCGCCATGGTGCTGGACCAATTCCTCTCCGAGCTTCAAAACCCCATCACC
ACCACCACAGCCTCCTTCGACGGCAGCGAAGCCACCCGACTGATCCCCTC
GCTCGACACCGTCATCGGTATGCCTGCCTCCCCCGAAGCCAGAGACCCCG
AATGGTCTCGTCGCGCCGACGAACTCCTCGCTACCTTCCTCGAGGGCCAA
CCCTCGATCGGCCTGCCCGTGCTCAACCCCACAGCCTTACCCGCCAAGTC
TCTCCGCACGGAGCATGTCATCCCCGCGGAACAGGCGACCGCGCTACGTC
GTGCCTGTCGCGCAAGAAACATCACTCTCACGACAGCTATGCATGCCTCT
GCGATTATCGAGACTGCGCGTGCGGCTAATTCTACCGATCCATCATCGCG
CTACATCTCCTGGCAAGCCTTCGATCTCCGCAAATACCTGCCCCCACCCT
ACGACGGCCCCATCCACGGCCCGTCCCTGCGCATGGTCGGCCTCCCGCTG
AATGTCGAAGCCACGCCCACAACAAGCTGGTCGGACCTCGTGGATACCAT
TCAGCCGCTGTACCGCCAGTCGTGGAACTTGGCCGACAGTGACATGATGT
TTGTACGGGTGCCGTTCGTGGAAAAGGCCACGGCCATGTTCCAGGCTGCT
GCTGCTGCGGGGGCGGCGCAGCCGACAGAACCAAATATTAATAGTTTGGG
GCCTGTGGATCGGTTAATCAGGGAGAGTTATGGGGAGGTCAAGGTCAAGG
GTTTGGTGCTGATGGTGCAGATGTTGGCGCAGCAGTTGTATGTGCATTGT
TGGAGTTGGAGGGATGAGTTGCATTTGAGTGCCAGTTATAATGAGGCGTA
TTATGAACCGGTGTTTGTGGAGGCGTGGTTGAGGGCGATGAGGGAGAATA
TGGTGCGGAATTTGTTGGAGGATACTACGGATACGAATAAGGAAACTATC
GTCGGTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004113-T2.utr5p1 | KJC3_004113-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004113-T2.utr3p1 | KJC3_004113-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.7 |
| DBxref | InterPro:IPR023213 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3979181..3981015 + |
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