|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3993138..3994342+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004116-T1 ID=KJC3_004116-T1|Name=KJC3_004116-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1205bp|location=Sequence derived from alignment at ch3:3993138..3994342+ (Aspergillus niger KJC3)
ATGACAAACGAAAAACAAACCTGGTTTATTACTGGCTGCTCCAGTGGCTT
CGGGGAGCAGTTTGTACGCCAACTTCGCGAACGGGGTGACAACGTCGTCG
CCACAGGCCGGAATGCTGAGAGCAAACTTGCGCACCTGAAGGATACCGGT
GCCACTATCCTTGAACTCGATGTTACGGCACCTCAGGAAGAGCTGAACGC
GAAGTTTCAGCAGGCCATCGATATCTATGGGGGAGTCGATGTACTCGTGA
ACAACGCGGGGTACATTCAATGCGGGGCTATCGAAGAGCTCACGTGAGTT
TTGGCCTGAGGACTTCTAGTCTTTTTGTTTGATAACCTCATTTGGGAAGG
ATATGTTTGACTGACTGAGACGTTAGACCGGAGGATATGAAACGATCCCT
CGACACTAACTTCCATGGGCCTATCAACCTGACCCGCGCTGCATTGCCGC
ATTTTCGCAGCAAGGGTGAGAAGGGTCAAGGTATGATCATTTACATGGGA
TCGCAGTCTGGTTTTTGGGGAGAGCCAGCTGCATCCGCGTACTGTGCCAG
TAAATTTGCTTTAGAAGGTATGCTTTACCAGTCTGTCCATCTGCTCCTAC
ACGACAAAGCTGACAGTAAAACTATTTCCCACCACAGGAGCCGTTGAAAG
TCTCTCTAAAGAGCTAGGCTGGCTTGCACCAGGCATCAAACCCCTCATTA
TAGAAGCAGGCATCTTCAGCACTGAGGTCATGAGGAATATCAATCATGTT
CCTTACCGAGTCGATTTCTACCGGGGCCTTAACGACGCGTGTCGCGTGCG
CGGAGAAGGCAACTACCGCAACCCACCGGGCAATGCCGTGGATTTGATTG
CCAAGATCATCCAGATTGCGAAGGGAGAGGGTATTGCAGAGGGCAAAGAG
ATCCCATTGCGTGTGCCGTTTGGTAGTGATTCTCTTGGATTCCTTAAGGA
GAAGGCGCGGGATATGATGCGCATTGCAGAGGAATGGGAAGAGATTGCCC
GCAGCACTGATTTCCCAGATCACAAGGGACCTATGCCAGATATACCGGCT
TGAAGTAAGCTCCCATGAACTCTTTAGTGGGTCATTGGAAACTATGGAAT
AGGGTCTTACGTACCAACCAAATGATGACAATTGTTATGTTCTCAATACT
CGAATTAAAGTACACTCTGTTCCCATAGAAATCTATTGAGTGTCCACAAC
TTGAC back to topCoding sequence (CDS) from alignment at ch3:3993138..3994342+ >KJC3_004116-T1 ID=KJC3_004116-T1|Name=KJC3_004116-T1|organism=Aspergillus niger KJC3|type=CDS|length=2700bp|location=Sequence derived from alignment at ch3:3993138..3994342+ (Aspergillus niger KJC3)
ATGACAAACGAAAAACAAACCTGGTTTATTACTGGCTGCTCCAGTGGCTT
CGGGGAGCAGTTTGTACGCCAACTTCGCGAACGGGGTGACAACGTCGTCG
CCACAGGCCGGAATGCTGAGAGCAAACTTGCGCACCTGAAGGATACCGGT
GCCACTATCCTTGAACTCGATGTTACGGCACCTCAGGAAGAGCTGAACGC
GAAGTTTCAGCAGGCCATCGATATCTATGGGGGAGTCGATGTACTCGTGA
ACAACGCGGGGTACATTCAATGCGGGGCTATCGAAGAGCTCACACCGGAG
GATATGAAACGATCCCTCGACACTAACTTCCATGGGCCTATCAACCTGAC
CCGCGCTGCATTGCCGCATTTTCGCAGCAAGGGTGAGAAGGGTCAAGGTA
TGATCATTTACATGGGATCGCAGTCTGGTTTTTGGGGAGAGCCAGCTGCA
TCCGCGTACTGTGCCAGTAAATTTGCTTTAGAAGGAGCCGTTGAAAGTCT
CTCTAAAGAGCTAGGCTGGCTTGCACCAGGCATCAAACCCCTCATTATAG
AAGCAGGCATCTTCAGCACTGAGGTCATGAGGAATATCAATCATGTTCCT
TACCGAGTCGATTTCTACCGGGGCCTTAACGACGCGTGTCGCGTGCGCGG
AGAAGGCAACTACCGCAACCCACCGGGCAATGCCGTGGATTTGATTGCCA
AGATCATCCAGATTGCGAAGGGAGAGGGTATTGCAGAGGGCAAAGAGATC
CCATTGCGTGTGCCGTTTGGTAGTGATTCTCTTGGATTCCTTAAGGAGAA
GGCGCGGGATATGATGCGCATTGCAGAGGAATGGGAAGAGATTGCCCGCA
GCACTGATTTCCCAGATCACAAGGGACCTATGCCAGATATACCGGCTTGA
ATGACAAACGAAAAACAAACCTGGTTTATTACTGGCTGCTCCAGTGGCTT
CGGGGAGCAGTTTGTACGCCAACTTCGCGAACGGGGTGACAACGTCGTCG
CCACAGGCCGGAATGCTGAGAGCAAACTTGCGCACCTGAAGGATACCGGT
GCCACTATCCTTGAACTCGATGTTACGGCACCTCAGGAAGAGCTGAACGC
GAAGTTTCAGCAGGCCATCGATATCTATGGGGGAGTCGATGTACTCGTGA
ACAACGCGGGGTACATTCAATGCGGGGCTATCGAAGAGCTCACACCGGAG
GATATGAAACGATCCCTCGACACTAACTTCCATGGGCCTATCAACCTGAC
CCGCGCTGCATTGCCGCATTTTCGCAGCAAGGGTGAGAAGGGTCAAGGTA
TGATCATTTACATGGGATCGCAGTCTGGTTTTTGGGGAGAGCCAGCTGCA
TCCGCGTACTGTGCCAGTAAATTTGCTTTAGAAGGAGCCGTTGAAAGTCT
CTCTAAAGAGCTAGGCTGGCTTGCACCAGGCATCAAACCCCTCATTATAG
AAGCAGGCATCTTCAGCACTGAGGTCATGAGGAATATCAATCATGTTCCT
TACCGAGTCGATTTCTACCGGGGCCTTAACGACGCGTGTCGCGTGCGCGG
AGAAGGCAACTACCGCAACCCACCGGGCAATGCCGTGGATTTGATTGCCA
AGATCATCCAGATTGCGAAGGGAGAGGGTATTGCAGAGGGCAAAGAGATC
CCATTGCGTGTGCCGTTTGGTAGTGATTCTCTTGGATTCCTTAAGGAGAA
GGCGCGGGATATGATGCGCATTGCAGAGGAATGGGAAGAGATTGCCCGCA
GCACTGATTTCCCAGATCACAAGGGACCTATGCCAGATATACCGGCTTGA
ATGACAAACGAAAAACAAACCTGGTTTATTACTGGCTGCTCCAGTGGCTT
CGGGGAGCAGTTTGTACGCCAACTTCGCGAACGGGGTGACAACGTCGTCG
CCACAGGCCGGAATGCTGAGAGCAAACTTGCGCACCTGAAGGATACCGGT
GCCACTATCCTTGAACTCGATGTTACGGCACCTCAGGAAGAGCTGAACGC
GAAGTTTCAGCAGGCCATCGATATCTATGGGGGAGTCGATGTACTCGTGA
ACAACGCGGGGTACATTCAATGCGGGGCTATCGAAGAGCTCACACCGGAG
GATATGAAACGATCCCTCGACACTAACTTCCATGGGCCTATCAACCTGAC
CCGCGCTGCATTGCCGCATTTTCGCAGCAAGGGTGAGAAGGGTCAAGGTA
TGATCATTTACATGGGATCGCAGTCTGGTTTTTGGGGAGAGCCAGCTGCA
TCCGCGTACTGTGCCAGTAAATTTGCTTTAGAAGGAGCCGTTGAAAGTCT
CTCTAAAGAGCTAGGCTGGCTTGCACCAGGCATCAAACCCCTCATTATAG
AAGCAGGCATCTTCAGCACTGAGGTCATGAGGAATATCAATCATGTTCCT
TACCGAGTCGATTTCTACCGGGGCCTTAACGACGCGTGTCGCGTGCGCGG
AGAAGGCAACTACCGCAACCCACCGGGCAATGCCGTGGATTTGATTGCCA
AGATCATCCAGATTGCGAAGGGAGAGGGTATTGCAGAGGGCAAAGAGATC
CCATTGCGTGTGCCGTTTGGTAGTGATTCTCTTGGATTCCTTAAGGAGAA
GGCGCGGGATATGATGCGCATTGCAGAGGAATGGGAAGAGATTGCCCGCA
GCACTGATTTCCCAGATCACAAGGGACCTATGCCAGATATACCGGCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004116-T1.utr3p1 | KJC3_004116-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.7 |
| Note | SMCOG1001:short-chain dehydrogenase/reductase SDR |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3993138..3994342 + |
|
