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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:3994970..3996167+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_004117-T1 ID=KJC3_004117-T1|Name=KJC3_004117-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1198bp|location=Sequence derived from alignment at ch3:3994970..3996167+ (Aspergillus niger KJC3)
CATATATAGTGCCCCTCTCGCCACCGAAATGCACCCCCCACTAATCACTT
TCATACCACAGAATCCACACAATGCATCTCTCTACGCTGTTCCTAACGTT
CCTAACCCTCTCACCCACCCTCTCCCAACCAACATCACCCATATCCGTCA
CCCAACTCTTCAACTTCAGCACCTCCACTGACATTGAAAACGGCGCCATC
GACCCTGTTACTAACACTCTTCTCATAACCACCTTCACCGACGCCCGTCT
CTACGCTCTCGACCTCAATGACCCCCACCCCACCGCCAACCTCCTCACCT
CCTTCTACCCCAACGCCACCGCCATCACTGGCATAGCCCCCATCGGCCAC
GGCAAGTACGCCATCACCGGCGGCGTCCGCGGCAGCTACCACTACTACAA
TGAAACTATCTACACCATAGACTTTGGGGCCTACGCAGCCAATGCCACTG
CTTCCCCGGTCACCAAAGCAGTCGCGCATCTCCCGCAGGCGATCATGCTC
AATGGCCTTGCTTCTCTCCCACGCCATCCCACCACTGTCCTAGCAGCGGA
TTCCCGTGTGGGGTGTATTTTCCGCATCGACACGCTGACCGGAACCTCGG
ACATCGTTGTCCAGAGCGACGCATTGTCGGCTCCGGCGAATGGGTCATCG
GAGATCGGGATTAATGGATTGAAGACACACGGGGAGTATGCGTATTATAC
CAATACTGCGTTGAAAACTTTTGGAAGGGTGAAGATTACCGATGATGGTA
CTGCGGTGCCTGGGAAAGATGGCAAGGTTGAGGTGGAAGTTCTTGCCACG
TTGAACCCCGGAAAGGAGGAATACCAGTGGGATGACTTCGATTTCGATAA
GGAGGGGACAGCGTATGTGGCTATGGCAGGGTCGGGTGGTAGGGCAATCG
GAACAATTAGTCCTGATGGTGATGTCGAGGTGTTGTTTACTAAGGTGATC
CGTGGGCCGACTTCGGTGCATGTTGTTGAAAAGGAGGGGATGAGGAAGAA
GTTGTATATCACTACTAATGGGAACGGTGGACAGGTTGTGGAGGCGGTGC
TCTGAATGGAGTCAGGTACATAATGTGCCACTTAGAGTGGCTTAGCTTTG
TGGTTGACCGTTTCTGTTTGAAGGACAACTGAAGAGGTTGAATTAGGTAT
CGATTCTCTGGTTGAGGGCTGGCTTTGTTTCTGTCCGTATTCACTGAC back to topCoding sequence (CDS) from alignment at ch3:3994970..3996167+ >KJC3_004117-T1 ID=KJC3_004117-T1|Name=KJC3_004117-T1|organism=Aspergillus niger KJC3|type=CDS|length=984bp|location=Sequence derived from alignment at ch3:3994970..3996167+ (Aspergillus niger KJC3)
ATGCATCTCTCTACGCTGTTCCTAACGTTCCTAACCCTCTCACCCACCCT
CTCCCAACCAACATCACCCATATCCGTCACCCAACTCTTCAACTTCAGCA
CCTCCACTGACATTGAAAACGGCGCCATCGACCCTGTTACTAACACTCTT
CTCATAACCACCTTCACCGACGCCCGTCTCTACGCTCTCGACCTCAATGA
CCCCCACCCCACCGCCAACCTCCTCACCTCCTTCTACCCCAACGCCACCG
CCATCACTGGCATAGCCCCCATCGGCCACGGCAAGTACGCCATCACCGGC
GGCGTCCGCGGCAGCTACCACTACTACAATGAAACTATCTACACCATAGA
CTTTGGGGCCTACGCAGCCAATGCCACTGCTTCCCCGGTCACCAAAGCAG
TCGCGCATCTCCCGCAGGCGATCATGCTCAATGGCCTTGCTTCTCTCCCA
CGCCATCCCACCACTGTCCTAGCAGCGGATTCCCGTGTGGGGTGTATTTT
CCGCATCGACACGCTGACCGGAACCTCGGACATCGTTGTCCAGAGCGACG
CATTGTCGGCTCCGGCGAATGGGTCATCGGAGATCGGGATTAATGGATTG
AAGACACACGGGGAGTATGCGTATTATACCAATACTGCGTTGAAAACTTT
TGGAAGGGTGAAGATTACCGATGATGGTACTGCGGTGCCTGGGAAAGATG
GCAAGGTTGAGGTGGAAGTTCTTGCCACGTTGAACCCCGGAAAGGAGGAA
TACCAGTGGGATGACTTCGATTTCGATAAGGAGGGGACAGCGTATGTGGC
TATGGCAGGGTCGGGTGGTAGGGCAATCGGAACAATTAGTCCTGATGGTG
ATGTCGAGGTGTTGTTTACTAAGGTGATCCGTGGGCCGACTTCGGTGCAT
GTTGTTGAAAAGGAGGGGATGAGGAAGAAGTTGTATATCACTACTAATGG
GAACGGTGGACAGGTTGTGGAGGCGGTGCTCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004117-T1.utr5p1 | KJC3_004117-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_004117-T1.utr3p1 | KJC3_004117-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.7 |
| Note | SECRETED:SignalP(1-18) |
| DBxref | InterPro:IPR011042 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:3994970..3996167 + |
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